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Search of human proteins with 8922792
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922792 nudix-type motif 15 [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922792 nudix-type motif 15 [Homo sapiens] 355 1e-98
gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] 45 2e-05
gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] 45 2e-05
gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens] 45 2e-05
gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens] 45 2e-05
gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens] 45 2e-05
gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens] 45 2e-05
gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens] 45 2e-05
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 44 8e-05
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 37 0.008
gi|37594464 nudix-type motif 5 [Homo sapiens] 35 0.022
gi|157671915 guanylate binding protein family, member 6 [Homo sa... 33 0.14
gi|13899267 nudix-type motif 12 [Homo sapiens] 32 0.19
gi|10835248 regenerating islet-derived 1 beta precursor [Homo sa... 32 0.32
gi|29725633 regenerating islet-derived 1 alpha precursor [Homo s... 32 0.32
gi|22219467 nudix-type motif 2 [Homo sapiens] 31 0.42
gi|22219465 nudix-type motif 2 [Homo sapiens] 31 0.42
gi|4502125 nudix-type motif 2 [Homo sapiens] 31 0.42
gi|50593112 nudix-type motif 13 [Homo sapiens] 30 0.72
gi|48255955 plasma membrane calcium ATPase 3 isoform 3b [Homo sa... 30 1.2
gi|48255953 plasma membrane calcium ATPase 3 isoform 3a [Homo sa... 30 1.2
gi|189181750 human immunodeficiency virus type I enhancer bindin... 29 1.6
gi|116089331 human immunodeficiency virus type I enhancer bindin... 29 1.6
gi|23510451 N-acylaminoacyl-peptide hydrolase [Homo sapiens] 28 2.7
gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapi... 27 7.9
gi|46358366 zinc finger protein 746 [Homo sapiens] 27 7.9
>gi|8922792 nudix-type motif 15 [Homo sapiens]
Length = 164
Score = 355 bits (910), Expect = 1e-98
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MTASAQPRGRRPGVGVGVVVTSCKHPRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECA 60
MTASAQPRGRRPGVGVGVVVTSCKHPRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECA
Sbjct: 1 MTASAQPRGRRPGVGVGVVVTSCKHPRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECA 60
Query: 61 QRETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESW 120
QRETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESW
Sbjct: 61 QRETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESW 120
Query: 121 EWVPWEELPPLDQLFWGLRCLKEQGYDPFKEDLNHLVGYKGNHL 164
EWVPWEELPPLDQLFWGLRCLKEQGYDPFKEDLNHLVGYKGNHL
Sbjct: 121 EWVPWEELPPLDQLFWGLRCLKEQGYDPFKEDLNHLVGYKGNHL 164
>gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 38 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 97
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 98 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 151
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 152 QKKKFHGYFK 161
>gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 15 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 74
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 75 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 128
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 129 QKKKFHGYFK 138
>gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 38 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 97
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 98 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 151
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 152 QKKKFHGYFK 161
>gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 15 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 74
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 75 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 128
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 129 QKKKFHGYFK 138
>gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 38 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 97
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 98 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 151
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 152 QKKKFHGYFK 161
>gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 15 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 74
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 75 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 128
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 129 QKKKFHGYFK 138
>gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 45.4 bits (106), Expect = 2e-05
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 26 PRCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVH-FASVVNSF 84
P+ VLLG +K GAG + GG ++ GET E+ A+RE EE+ L + +H +V F
Sbjct: 15 PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEF 74
Query: 85 IEKENYHYVTILMKGEVDVTHDSEPKNVE-PEKNESW---EWVPWEELPPLDQLFWGLRC 140
+ + LM V T + VE E W + +P++++ P D ++ L
Sbjct: 75 VGEPE------LMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLL 128
Query: 141 LKEQGYDPFK 150
K++ + FK
Sbjct: 129 QKKKFHGYFK 138
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 43.5 bits (101), Expect = 8e-05
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 13 GVGVGVVVTSCKHPRCVLLGKRKG--SVGAGSFQLPGGHLEFGETWEECAQRETWEEAAL 70
GV +GV V + VLL +R SV + PGGH+E E + RE WEE+ L
Sbjct: 90 GVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGL 149
Query: 71 HLKNVHFASVVNSFIEK----------ENYHYVTILMKGEVDVTHDSEPKNVEPEKNE 118
HL F+ V E YH++ + + + ++P NE
Sbjct: 150 HLPQGQFSWVPLGLWESAYPPRLSWGLPKYHHIVLYLLVISQESQQQLQARIQPNPNE 207
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 37.0 bits (84), Expect = 0.008
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 41 GSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASV 80
GS+ LP G +E GET E QRE EEA LH + SV
Sbjct: 69 GSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSV 108
>gi|37594464 nudix-type motif 5 [Homo sapiens]
Length = 219
Score = 35.4 bits (80), Expect = 0.022
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 13 GVGVGVVVTSCKHPRCVLLGKR-KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAAL- 70
GV V V+ H C++L K+ + +G + P G ++ GET E A RE EE
Sbjct: 61 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120
Query: 71 -HLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELP 129
+ A ++ + H VT+ + G+ D+E +P+ + E+V LP
Sbjct: 121 GDIAECSPAVCMDPGLSNCTIHIVTVTINGD-----DAENARPKPKPGDG-EFVEVISLP 174
Query: 130 PLDQL 134
D L
Sbjct: 175 KNDLL 179
>gi|157671915 guanylate binding protein family, member 6 [Homo
sapiens]
Length = 633
Score = 32.7 bits (73), Expect = 0.14
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 37 SVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVTIL 96
S+ AGSF +PGGH + ET +E +++ W+ + K V V F+E + +IL
Sbjct: 420 SISAGSFSVPGGHKLYMET-KERIEQDYWQ---VPRKGVKAKEVFQRFLESQMVIEESIL 475
Query: 97 MKGEVDVTHDSEPKNVEPEKNESWE 121
+ +T + V+ K E+ E
Sbjct: 476 QSDKA-LTDREKAVAVDRAKKEAAE 499
>gi|13899267 nudix-type motif 12 [Homo sapiens]
Length = 462
Score = 32.3 bits (72), Expect = 0.19
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 18 VVVTSCKHP---RCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKN 74
VV+ HP +C LLG++K G F G +E GET E+ +RE EE+ + + +
Sbjct: 324 VVIMQVIHPDGTKC-LLGRQK-RFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGH 381
Query: 75 VHFAS 79
V + +
Sbjct: 382 VQYVA 386
>gi|10835248 regenerating islet-derived 1 beta precursor [Homo
sapiens]
Length = 166
Score = 31.6 bits (70), Expect = 0.32
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 63 ETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNV-----EPEKN 117
ETW +A L+ +N++ ++V+ + E +++ + D NV +P+KN
Sbjct: 55 ETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESSTD------DSNVWIGLHDPKKN 108
Query: 118 ESWEW 122
W W
Sbjct: 109 RRWHW 113
>gi|29725633 regenerating islet-derived 1 alpha precursor [Homo
sapiens]
Length = 166
Score = 31.6 bits (70), Expect = 0.32
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 62 RETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNV-----EPEK 116
RETW +A L+ +N++ ++V+ + E +++ + D NV +P+K
Sbjct: 54 RETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTD------DFNVWIGLHDPKK 107
Query: 117 NESWEW 122
N W W
Sbjct: 108 NRRWHW 113
>gi|22219467 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 31.2 bits (69), Expect = 0.42
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 35 KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVT 94
+ S G + P GH+E GE E A RET EEA + + +++ F + NY
Sbjct: 30 QASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNY---V 83
Query: 95 ILMKGEVDVTHDSEPKNVEPE-----KNESWEWVPWEELPPLDQLFWGLRCLKEQGY 146
K + + +E K+ + E +++++ W+ EE L Q F ++ ++G+
Sbjct: 84 ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGH 139
>gi|22219465 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 31.2 bits (69), Expect = 0.42
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 35 KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVT 94
+ S G + P GH+E GE E A RET EEA + + +++ F + NY
Sbjct: 30 QASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNY---V 83
Query: 95 ILMKGEVDVTHDSEPKNVEPE-----KNESWEWVPWEELPPLDQLFWGLRCLKEQGY 146
K + + +E K+ + E +++++ W+ EE L Q F ++ ++G+
Sbjct: 84 ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGH 139
>gi|4502125 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 31.2 bits (69), Expect = 0.42
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 35 KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVT 94
+ S G + P GH+E GE E A RET EEA + + +++ F + NY
Sbjct: 30 QASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNY---V 83
Query: 95 ILMKGEVDVTHDSEPKNVEPE-----KNESWEWVPWEELPPLDQLFWGLRCLKEQGY 146
K + + +E K+ + E +++++ W+ EE L Q F ++ ++G+
Sbjct: 84 ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGH 139
>gi|50593112 nudix-type motif 13 [Homo sapiens]
Length = 352
Score = 30.4 bits (67), Expect = 0.72
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 27 RCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHF 77
RC+L R+ S G + G + GE+ EE +RE EE L ++++ +
Sbjct: 211 RCLLA--RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQY 259
>gi|48255955 plasma membrane calcium ATPase 3 isoform 3b [Homo
sapiens]
Length = 1220
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 13/63 (20%)
Query: 101 VDVTHDSEPKNVEPEKNESWEWVPWEELPPLDQLFWG----------LRCLKEQGYDPFK 150
V V +P + P E W W + + +L WG L+CLKE G+ P K
Sbjct: 1019 VIVQFGGKPFSCSPLSTEQWLWCLFVGV---GELVWGQVIATIPTSQLKCLKEAGHGPGK 1075
Query: 151 EDL 153
+++
Sbjct: 1076 DEM 1078
>gi|48255953 plasma membrane calcium ATPase 3 isoform 3a [Homo
sapiens]
Length = 1173
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 13/63 (20%)
Query: 101 VDVTHDSEPKNVEPEKNESWEWVPWEELPPLDQLFWG----------LRCLKEQGYDPFK 150
V V +P + P E W W + + +L WG L+CLKE G+ P K
Sbjct: 1019 VIVQFGGKPFSCSPLSTEQWLWCLFVGV---GELVWGQVIATIPTSQLKCLKEAGHGPGK 1075
Query: 151 EDL 153
+++
Sbjct: 1076 DEM 1078
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 29.3 bits (64), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 69 ALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTH-DSEPKNVEPEKNESWEW----- 122
A H ++ H S+ + + N IL+ E D + EP EPEK E ++W
Sbjct: 834 APHGRSAH--SLQPKLVRQPNIQVPEILVTEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQ 891
Query: 123 ----VPWEELPP 130
+P E+LPP
Sbjct: 892 TLAQLPAEKLPP 903
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 29.3 bits (64), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 69 ALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTH-DSEPKNVEPEKNESWEW----- 122
A H ++ H S+ + + N IL+ E D + EP EPEK E ++W
Sbjct: 834 APHGRSAH--SLQPKLVRQPNIQVPEILVTEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQ 891
Query: 123 ----VPWEELPP 130
+P E+LPP
Sbjct: 892 TLAQLPAEKLPP 903
>gi|23510451 N-acylaminoacyl-peptide hydrolase [Homo sapiens]
Length = 732
Score = 28.5 bits (62), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 116 KNESWEWVPWEELPPLDQLFWGLRCLK 142
K +S WV EE P+ + WG+R L+
Sbjct: 443 KEQSVLWVSLEEAEPIPDIHWGIRVLQ 469
>gi|211059431 RANBP2-like and GRIP domain containing 4 [Homo sapiens]
Length = 1758
Score = 26.9 bits (58), Expect = 7.9
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 32 GKRKGSVGAGSFQLPGGHLEFGET--WEECAQRETWEEAALHLKNVHFASVVNSFIEKEN 89
G G+ GA + G T W+ C RE + ++ +VH + + +S + K
Sbjct: 1223 GSGTGAAGASDTTIKPNPENTGPTLEWDNCDLREDALDDSVSSSSVHASPLASSPVRKNL 1282
Query: 90 YHY 92
+H+
Sbjct: 1283 FHF 1285
>gi|46358366 zinc finger protein 746 [Homo sapiens]
Length = 644
Score = 26.9 bits (58), Expect = 7.9
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 108 EPKNVEPEKNESWEWVPWEELPPLDQLF------WGLRCLKEQGYDP 148
EP E + E V EE PP D LF W RC G +P
Sbjct: 347 EPARPERDMGELSPAVAQEETPPGDWLFGGVRWGWNFRCKPPVGLNP 393
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,863,799
Number of Sequences: 37866
Number of extensions: 379708
Number of successful extensions: 891
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 873
Number of HSP's gapped (non-prelim): 26
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.