Guide to the Human Genome
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Name: OR2J3 Sequence: fasta or formatted (311aa) NCBI GI: 185134902
Description:

olfactory receptor, family 2, subfamily J, member 3

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           2
 C cysteine            3.2         10           1
 D aspartate           2.6          8           2
 E glutamate           2.3          7           1
 F phenylalanine       6.8         21           2
 G glycine             5.5         17           1
 H histidine           3.5         11           1
 I isoleucine          6.4         20           3
 K lysine              1.9          6           1
 L leucine            14.8         46           2
 M methionine          3.9         12           1
 N asparagine          3.5         11           1
 P proline             4.5         14           2
 Q glutamine           2.6          8           1
 R arginine            3.2         10           1
 S serine              8.0         25           2
 T threonine           6.4         20           2
 V valine              9.6         30           3
 W tryptophan          1.6          5           1
 Y tyrosine            4.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily J, member 3... 
OR2J2                 0.875   olfactory receptor, family 2, subfamily J, member 2...
OR2B2                 0.585   olfactory receptor, family 2, subfamily B, member 2 ...
OR2C3                 0.583   olfactory receptor, family 2, subfamily C, member 3...
OR2G3                 0.570   olfactory receptor, family 2, subfamily G, member 3 ...
OR2H1                 0.560   olfactory receptor, family 2, subfamily H, member 1 ...
OR2B6                 0.558   olfactory receptor, family 2, subfamily B, member 6 ...
OR2H2                 0.558   olfactory receptor, family 2, subfamily H, member 2 ...
OR2G6                 0.557   olfactory receptor, family 2, subfamily G, member 6 ...
OR2Y1                 0.557   olfactory receptor, family 2, subfamily Y, member 1 ...
OR2W1                 0.544   olfactory receptor, family 2, subfamily W, member 1 ...
OR2W3                 0.540   olfactory receptor, family 2, subfamily W, member 3 ...
OR2G2                 0.539   olfactory receptor, family 2, subfamily G, member 2 ...
OR2B11                0.537   olfactory receptor, family 2, subfamily B, member 11...
OR2C1                 0.537   olfactory receptor, family 2, subfamily C, member 1...
OR2B3                 0.534   olfactory receptor, family 2, subfamily B, member 3 ...
OR2K2                 0.465   olfactory receptor, family 2, subfamily K, member 2 ...
OR2D3                 0.453   olfactory receptor, family 2, subfamily D, member 3 ...
OR13C3                0.445   olfactory receptor, family 13, subfamily C, member 3...
OR5V1                 0.443   olfactory receptor, family 5, subfamily V, member 1 ...
OR10A7                0.443   olfactory receptor, family 10, subfamily A, member 7...
OR13F1                0.440   olfactory receptor, family 13, subfamily F, member 1...
OR13C9                0.440   olfactory receptor, family 13, subfamily C, member 9...
OR13C4                0.437   olfactory receptor, family 13, subfamily C, member 4...
OR2D2                 0.437   olfactory receptor, family 2, subfamily D, member 2 ...
OR13C2                0.432   olfactory receptor, family 13, subfamily C, member 2...
OR2F1                 0.430   olfactory receptor, family 2, subfamily F, member 1 ...
OR13D1                0.429   olfactory receptor, family 13, subfamily D, member 1...
OR5B21                0.429   olfactory receptor, family 5, subfamily B, member 21...
OR2A1                 0.427   olfactory receptor, family 2, subfamily A, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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