Guide to the Human Genome
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Name: SLC28A2 Sequence: fasta or formatted (658aa) NCBI GI: 227116277
Description:

solute carrier family 28 (sodium-coupled nucleoside transporter), member 2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         62           2
 C cysteine            3.0         20           2
 D aspartate           2.1         14           1
 E glutamate           5.0         33           2
 F phenylalanine       6.8         45           2
 G glycine             7.9         52           2
 H histidine           1.1          7           2
 I isoleucine          6.1         40           3
 K lysine              4.3         28           2
 L leucine            12.0         79           2
 M methionine          2.6         17           2
 N asparagine          3.0         20           2
 P proline             3.2         21           2
 Q glutamine           3.2         21           2
 R arginine            3.6         24           2
 S serine              7.8         51           2
 T threonine           6.2         41           2
 V valine              8.2         54           3
 W tryptophan          2.0         13           1
 Y tyrosine            2.4         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 28 (sodium-coupled nucleoside... 
SLC28A1               0.632   solute carrier family 28, member 1 isoform 1 
SLC28A3               0.396   concentrative Na+-nucleoside cotransporter 
SLC28A1               0.068   solute carrier family 28, member 1 isoform 2 
TMEM45A               0.006   transmembrane protein 45A 
ALOXE3                0.005   arachidonate lipoxygenase 3 
C12orf44              0.004   Atg13-interacting protein 
C12orf44              0.004   Atg13-interacting protein 
GRM7                  0.004   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.004   glutamate receptor, metabotropic 7 isoform a precurso...
ABCB9                 0.004   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.004   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.004   ATP-binding cassette, sub-family B (MDR/TAP), member...
OBSCN                 0.004   obscurin, cytoskeletal calmodulin and titin-interac...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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