Guide to the Human Genome
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Name: OR13D1 Sequence: fasta or formatted (346aa) NCBI GI: 52317186
Description:

olfactory receptor, family 13, subfamily D, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         14           2
 C cysteine            3.2         11           1
 D aspartate           2.6          9           1
 E glutamate           3.2         11           1
 F phenylalanine       5.2         18           2
 G glycine             4.0         14           1
 H histidine           2.3          8           1
 I isoleucine         11.3         39           3
 K lysine              3.5         12           2
 L leucine            15.6         54           4
 M methionine          5.5         19           2
 N asparagine          4.6         16           2
 P proline             2.6          9           2
 Q glutamine           2.0          7           2
 R arginine            2.6          9           1
 S serine              9.5         33           3
 T threonine           5.5         19           2
 V valine              7.2         25           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 13, subfamily D, member 1... 
OR2K2                 0.548   olfactory receptor, family 2, subfamily K, member 2 ...
OR13C2                0.545   olfactory receptor, family 13, subfamily C, member 2...
OR13C4                0.540   olfactory receptor, family 13, subfamily C, member 4...
OR13C3                0.534   olfactory receptor, family 13, subfamily C, member 3...
OR13C9                0.534   olfactory receptor, family 13, subfamily C, member 9...
OR13C8                0.527   olfactory receptor, family 13, subfamily C, member 8...
OR2S2                 0.527   olfactory receptor, family 2, subfamily S, member 2...
OR13C5                0.522   olfactory receptor, family 13, subfamily C, member 5...
OR13F1                0.508   olfactory receptor, family 13, subfamily F, member 1...
OR13J1                0.455   olfactory receptor, family 13, subfamily J, member 1...
OR5V1                 0.450   olfactory receptor, family 5, subfamily V, member 1 ...
OR2G6                 0.447   olfactory receptor, family 2, subfamily G, member 6 ...
OR2G3                 0.435   olfactory receptor, family 2, subfamily G, member 3 ...
OR2B2                 0.429   olfactory receptor, family 2, subfamily B, member 2 ...
OR2F1                 0.423   olfactory receptor, family 2, subfamily F, member 1 ...
OR2B3                 0.421   olfactory receptor, family 2, subfamily B, member 3 ...
OR10A7                0.421   olfactory receptor, family 10, subfamily A, member 7...
OR2D3                 0.420   olfactory receptor, family 2, subfamily D, member 3 ...
OR2H2                 0.414   olfactory receptor, family 2, subfamily H, member 2 ...
OR2B6                 0.414   olfactory receptor, family 2, subfamily B, member 6 ...
OR2C3                 0.412   olfactory receptor, family 2, subfamily C, member 3...
OR2F2                 0.411   olfactory receptor, family 2, subfamily F, member 2 ...
OR5A2                 0.409   olfactory receptor, family 5, subfamily A, member 2 ...
OR5T1                 0.406   olfactory receptor, family 5, subfamily T, member 1 ...
OR13H1                0.405   olfactory receptor, family 13, subfamily H, member 1...
OR2W1                 0.403   olfactory receptor, family 2, subfamily W, member 1 ...
OR5F1                 0.402   olfactory receptor, family 5, subfamily F, member 1 ...
OR5I1                 0.400   olfactory receptor, family 5, subfamily I, member 1 [...
OR2J3                 0.398   olfactory receptor, family 2, subfamily J, member 3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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