Guide to the Human Genome
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Name: OR13C5 Sequence: fasta or formatted (318aa) NCBI GI: 52218854
Description:

olfactory receptor, family 13, subfamily C, member 5

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         15           2
 C cysteine            2.8          9           1
 D aspartate           3.1         10           2
 E glutamate           3.5         11           1
 F phenylalanine       6.9         22           2
 G glycine             4.1         13           1
 H histidine           1.9          6           1
 I isoleucine          9.7         31           2
 K lysine              4.4         14           1
 L leucine            14.5         46           3
 M methionine          4.4         14           2
 N asparagine          4.4         14           2
 P proline             4.1         13           1
 Q glutamine           1.3          4           1
 R arginine            3.5         11           2
 S serine              8.2         26           3
 T threonine           7.5         24           3
 V valine              7.2         23           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 13, subfamily C, member 5... 
OR13C2                0.925   olfactory receptor, family 13, subfamily C, member 2...
OR13C9                0.859   olfactory receptor, family 13, subfamily C, member 9...
OR13C3                0.648   olfactory receptor, family 13, subfamily C, member 3...
OR13C4                0.640   olfactory receptor, family 13, subfamily C, member 4...
OR13C8                0.625   olfactory receptor, family 13, subfamily C, member 8...
OR2S2                 0.617   olfactory receptor, family 2, subfamily S, member 2...
OR13D1                0.567   olfactory receptor, family 13, subfamily D, member 1...
OR2K2                 0.522   olfactory receptor, family 2, subfamily K, member 2 ...
OR13F1                0.502   olfactory receptor, family 13, subfamily F, member 1...
OR13J1                0.466   olfactory receptor, family 13, subfamily J, member 1...
OR2G3                 0.464   olfactory receptor, family 2, subfamily G, member 3 ...
OR5V1                 0.449   olfactory receptor, family 5, subfamily V, member 1 ...
OR2B2                 0.444   olfactory receptor, family 2, subfamily B, member 2 ...
OR2B6                 0.439   olfactory receptor, family 2, subfamily B, member 6 ...
OR2G6                 0.433   olfactory receptor, family 2, subfamily G, member 6 ...
OR2B3                 0.433   olfactory receptor, family 2, subfamily B, member 3 ...
OR2F1                 0.431   olfactory receptor, family 2, subfamily F, member 1 ...
OR2J3                 0.426   olfactory receptor, family 2, subfamily J, member 3...
OR2J2                 0.425   olfactory receptor, family 2, subfamily J, member 2...
OR5F1                 0.425   olfactory receptor, family 5, subfamily F, member 1 ...
OR10A7                0.423   olfactory receptor, family 10, subfamily A, member 7...
OR2B11                0.421   olfactory receptor, family 2, subfamily B, member 11...
OR2H2                 0.420   olfactory receptor, family 2, subfamily H, member 2 ...
OR5I1                 0.416   olfactory receptor, family 5, subfamily I, member 1 [...
OR2D3                 0.416   olfactory receptor, family 2, subfamily D, member 3 ...
OR2C3                 0.415   olfactory receptor, family 2, subfamily C, member 3...
OR5A2                 0.415   olfactory receptor, family 5, subfamily A, member 2 ...
OR13H1                0.415   olfactory receptor, family 13, subfamily H, member 1...
OR2W1                 0.413   olfactory receptor, family 2, subfamily W, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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