Search of human proteins with 88703051

Search of human proteins with 88703051

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|88703051 adaptor-related protein complex 1, sigma 3 subunit
[Homo sapiens]
         (154 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|88703051 adaptor-related protein complex 1, sigma 3 subunit [...   311   1e-85
gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [H...   236   8e-63
gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [H...   229   5e-61
gi|70906430 adaptor-related protein complex 2, sigma 1 subunit i...   140   6e-34
gi|189409104 adaptor-related protein complex 4, sigma 1 subunit ...   115   1e-26
gi|5031581 adaptor-related protein complex 3, sigma 2 subunit [H...   110   6e-25
gi|4502861 adaptor-related protein complex 3, sigma 1 subunit [H...   101   3e-22
gi|21361394 adaptor-related protein complex 4, sigma 1 subunit i...    92   1e-19
gi|11038643 adaptor-related protein complex 2, sigma 1 subunit i...    80   5e-16
gi|7706337 coatomer protein complex, subunit zeta 1 [Homo sapiens]     47   6e-06
gi|68799814 adaptor-related protein complex 2, mu 1 subunit isof...    41   4e-04
gi|7705983 coatomer protein complex, subunit zeta 2 [Homo sapiens]     40   0.001
gi|14917109 adaptor-related protein complex 2, mu 1 subunit isof...    39   0.002
gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Ho...    38   0.003
gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo...    38   0.003
gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo...    38   0.004
gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Hom...    38   0.004
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo...    37   0.009
gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Hom...    35   0.019
gi|194473724 adaptor-related protein complex 1, mu 1 subunit iso...    33   0.13 
gi|14210504 adaptor-related protein complex 1, mu 1 subunit isof...    33   0.13 
gi|193083168 ectonucleoside triphosphate diphosphohydrolase 4 is...    28   2.4  
gi|4758662 ectonucleoside triphosphate diphosphohydrolase 4 isof...    28   2.4  
gi|196114970 protein tyrosine phosphatase, non-receptor type 12 ...    28   3.1  
gi|196114967 protein tyrosine phosphatase, non-receptor type 12 ...    28   3.1  
gi|196114951 protein tyrosine phosphatase, non-receptor type 12 ...    28   3.1  
gi|6912268 binder of Arl Two [Homo sapiens]                            28   4.1  
gi|4758638 peroxiredoxin 6 [Homo sapiens]                              27   5.3  
gi|55770832 cerebellar degeneration-related protein 2 [Homo sapi...    27   5.3  
gi|11863154 archain isoform 1 [Homo sapiens]                           27   9.1  

>gi|88703051 adaptor-related protein complex 1, sigma 3 subunit
           [Homo sapiens]
          Length = 154

 Score =  311 bits (798), Expect = 1e-85
 Identities = 154/154 (100%), Positives = 154/154 (100%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
Sbjct: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
           RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
Sbjct: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120

Query: 121 GEIQETSKKIAVKAIEDSDMLQETMEEYMNKPTF 154
           GEIQETSKKIAVKAIEDSDMLQETMEEYMNKPTF
Sbjct: 121 GEIQETSKKIAVKAIEDSDMLQETMEEYMNKPTF 154


>gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [Homo
           sapiens]
          Length = 157

 Score =  236 bits (601), Expect = 8e-63
 Identities = 109/145 (75%), Positives = 132/145 (91%)

Query: 2   IHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKR 61
           + F+LLFSRQGKLRLQKWY+ L DKE+KKITRE+VQ +L+R  +  SF++W++LK+VYKR
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 62  YASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGG 121
           YASLYFCCAIE+QDNEL+TLEI+HRYVELLDKYFG+VCELDIIFNFEKAYFILDEF++GG
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120

Query: 122 EIQETSKKIAVKAIEDSDMLQETME 146
           E+QETSKK  +KAIE +D+LQE  E
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEEAE 145


>gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo
           sapiens]
          Length = 158

 Score =  229 bits (585), Expect = 5e-61
 Identities = 104/146 (71%), Positives = 131/146 (89%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           M+ F+LLFSRQGKLRLQKWY+   DKERKK+ RE++Q++L+R  +  SF++W++LK+VYK
Sbjct: 1   MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
           RYASLYFCCAIE QDNEL+TLE++HRYVELLDKYFG+VCELDIIFNFEKAYFILDEF++G
Sbjct: 61  RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMG 120

Query: 121 GEIQETSKKIAVKAIEDSDMLQETME 146
           G++Q+TSKK  +KAIE +D+LQE  E
Sbjct: 121 GDVQDTSKKSVLKAIEQADLLQEEDE 146


>gi|70906430 adaptor-related protein complex 2, sigma 1 subunit
           isoform AP17 [Homo sapiens]
          Length = 142

 Score =  140 bits (352), Expect = 6e-34
 Identities = 60/135 (44%), Positives = 94/135 (69%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MI FIL+ +R GK RL KWY+   D E++K+  E+  ++  R  + ++FV+++  K++Y+
Sbjct: 1   MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
           RYA LYFC  ++  DN L  LE +H +VE+L++YF NVCELD++FNF K Y ++DE  + 
Sbjct: 61  RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120

Query: 121 GEIQETSKKIAVKAI 135
           GEI+ETS+   +K +
Sbjct: 121 GEIRETSQTKVLKQL 135


>gi|189409104 adaptor-related protein complex 4, sigma 1 subunit
           isoform 2 [Homo sapiens]
          Length = 144

 Score =  115 bits (289), Expect = 1e-26
 Identities = 52/144 (36%), Positives = 92/144 (63%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MI F L+ ++QG+ RL K+Y  +   +R  +  E+++  LSR +   SF+++K+ KL+Y+
Sbjct: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
           +YA+L+    + + +NE+   E +H +VE+LD+YF  V ELDI+FN +K + ILDE ++ 
Sbjct: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLN 120

Query: 121 GEIQETSKKIAVKAIEDSDMLQET 144
           G I ET++   +  +   D + E+
Sbjct: 121 GCIVETNRARILAPLLILDKMSES 144


>gi|5031581 adaptor-related protein complex 3, sigma 2 subunit [Homo
           sapiens]
          Length = 193

 Score =  110 bits (274), Expect = 6e-25
 Identities = 55/150 (36%), Positives = 94/150 (62%), Gaps = 6/150 (4%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKEL----- 55
           MI  IL+F+  GK RL ++Y   P++ +++I RE   ++L R     +F++   L     
Sbjct: 1   MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60

Query: 56  -KLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFIL 114
            KL+Y+ YA+LYF   +++ ++EL  L+++  +VE LDK F NVCELD+IF+ +K ++IL
Sbjct: 61  YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL 120

Query: 115 DEFIIGGEIQETSKKIAVKAIEDSDMLQET 144
            E ++GG + ET+    V  IE  + L+++
Sbjct: 121 QEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150


>gi|4502861 adaptor-related protein complex 3, sigma 1 subunit [Homo
           sapiens]
          Length = 193

 Score =  101 bits (251), Expect = 3e-22
 Identities = 53/150 (35%), Positives = 90/150 (60%), Gaps = 6/150 (4%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKEL----- 55
           MI  IL+F+  GK RL K+Y    +  +++I RE   ++  R     +F++   L     
Sbjct: 1   MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60

Query: 56  -KLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFIL 114
            KL+Y+ YA+LYF   +++ ++EL  L+++  +VE LDK F NVCELD+IF+ +K + IL
Sbjct: 61  NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL 120

Query: 115 DEFIIGGEIQETSKKIAVKAIEDSDMLQET 144
            E ++GG + ET+    V  I+  + L+++
Sbjct: 121 AEMVMGGMVLETNMNEIVTQIDAQNKLEKS 150


>gi|21361394 adaptor-related protein complex 4, sigma 1 subunit
           isoform 1 [Homo sapiens]
          Length = 159

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 39/105 (37%), Positives = 69/105 (65%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MI F L+ ++QG+ RL K+Y  +   +R  +  E+++  LSR +   SF+++K+ KL+Y+
Sbjct: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIF 105
           +YA+L+    + + +NE+   E +H +VE+LD+YF  V ELD+ F
Sbjct: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105


>gi|11038643 adaptor-related protein complex 2, sigma 1 subunit
           isoform AP17delta [Homo sapiens]
          Length = 104

 Score = 80.5 bits (197), Expect = 5e-16
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 38/135 (28%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MI FIL+ +R GK RL KWY+   D E++K+  E+  ++  R  + ++FV          
Sbjct: 1   MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFV---------- 50

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
                                       E+L++YF NVCELD++FNF K Y ++DE  + 
Sbjct: 51  ----------------------------EVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 82

Query: 121 GEIQETSKKIAVKAI 135
           GEI+ETS+   +K +
Sbjct: 83  GEIRETSQTKVLKQL 97


>gi|7706337 coatomer protein complex, subunit zeta 1 [Homo sapiens]
          Length = 177

 Score = 47.0 bits (110), Expect = 6e-06
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 5   ILLFSRQGKLRLQKWYI-TLPD-KERKKITREIVQIILSRGHRTSSFVDWKE-LKLVYKR 61
           IL+    G     K+Y  T P  KE+K   + I     ++ HRT S +   E L +VYK 
Sbjct: 16  ILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNI----FNKTHRTDSEIALLEGLTVVYKS 71

Query: 62  YASLYFCCAIENQDNELLTLEIVHRYVELLDKYF-GNVCELDIIFNFEKAYFILDEFIIG 120
              LYF     + +NEL+ + +++   + L +    NV +  ++ N E  +  +DE + G
Sbjct: 72  SIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDG 131

Query: 121 GEIQETSKKIAVKAI----EDSDMLQETMEEYM 149
           G I E+  +  V  +    ED  + ++T+ + +
Sbjct: 132 GVILESDPQQVVHRVALRGEDVPLTEQTVSQVL 164


>gi|68799814 adaptor-related protein complex 2, mu 1 subunit isoform
           b [Homo sapiens]
          Length = 433

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 29/147 (19%), Positives = 63/147 (42%), Gaps = 2/147 (1%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MI  + +++ +G++ + + Y    D  R  +    V +I +R    S   +       + 
Sbjct: 1   MIGGLFIYNHKGEVLISRVY--RDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHV 58

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
           + ++++     +   N  +  E +++  +++  YFG + E +I  NF   Y +LDE +  
Sbjct: 59  KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF 118

Query: 121 GEIQETSKKIAVKAIEDSDMLQETMEE 147
           G  Q +        I    +  +T EE
Sbjct: 119 GYPQNSETGALKTFITQQGIKSQTKEE 145


>gi|7705983 coatomer protein complex, subunit zeta 2 [Homo sapiens]
          Length = 210

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 2   IHFILLFSRQGKLRLQKWYI-TLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           I  + +    G+  L K+Y  T P  + + +  + V    SR     +F  +  + +VYK
Sbjct: 46  IKAVFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKTSRTESEIAF--FGGMTIVYK 103

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYF-GNVCELDIIFNFEKAYFILDEFII 119
               L+      + +NEL+ + ++    E L+     NV +  ++ N + A+ +LDE + 
Sbjct: 104 NSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLDEIVD 163

Query: 120 GGEIQETSKKIAVKAI----EDSDMLQETMEEYM 149
           GG I E+  +  ++ +    +D  + ++++ + +
Sbjct: 164 GGVILESDPQQVIQKVNFRADDGGLTEQSVAQVL 197


>gi|14917109 adaptor-related protein complex 2, mu 1 subunit isoform
           a [Homo sapiens]
          Length = 435

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
           MI  + +++ +G++ + + Y    D  R  +    V +I +R    S   +       + 
Sbjct: 1   MIGGLFIYNHKGEVLISRVY--RDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHV 58

Query: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG 120
           + ++++     +   N  +  E +++  +++  YFG + E +I  NF   Y +LDE +  
Sbjct: 59  KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF 118

Query: 121 GEIQET 126
           G  Q +
Sbjct: 119 GYPQNS 124


>gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Homo
           sapiens]
          Length = 418

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDK----------ERKKITREIVQIILSRGHRTSSFV 50
           MIH + L +  G + L+K + ++  +          ER      +  +I +  H   S  
Sbjct: 1   MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLS-- 58

Query: 51  DWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKA 110
                  VY+    ++F   I+ +   L  +E +HR V+    YFG   E  I  N    
Sbjct: 59  -------VYRH--KIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVV 109

Query: 111 YFILDEFIIGGEIQETSKKIAVKAIEDSDMLQ 142
           Y +L+E +  G    T   I  + I+   +L+
Sbjct: 110 YEVLEEMLDNGFPLATESNILKELIKPPTILR 141


>gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo
           sapiens]
          Length = 418

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDK----------ERKKITREIVQIILSRGHRTSSFV 50
           MIH + L +  G + L+K + ++  +          ER      +  +I +  H   S  
Sbjct: 1   MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLS-- 58

Query: 51  DWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKA 110
                  VY+    ++F   I+ +   L  +E +HR V+    YFG   E  I  N    
Sbjct: 59  -------VYRH--KIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVV 109

Query: 111 YFILDEFIIGGEIQETSKKIAVKAIEDSDMLQ 142
           Y +L+E +  G    T   I  + I+   +L+
Sbjct: 110 YEVLEEMLDNGFPLATESNILKELIKPPTILR 141


>gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo
           sapiens]
          Length = 418

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 19/154 (12%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDK---------ERKKITREIVQIILSRGHRTSSFVD 51
           MIH + L +  G + L+K + ++  +         + K    E V  ++S  H       
Sbjct: 1   MIHSLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHY----- 55

Query: 52  WKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAY 111
              L  +Y+    L+F   I+ +   L  +E +HR  +    YFG   E  I  N    Y
Sbjct: 56  ---LISIYRD--KLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVY 110

Query: 112 FILDEFIIGGEIQETSKKIAVKAIEDSDMLQETM 145
            +L+E +  G    T   I  + I+   +L+  +
Sbjct: 111 ELLEEMLDNGFPLATESNILKELIKPPTILRSVV 144


>gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Homo
           sapiens]
          Length = 418

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 19/154 (12%)

Query: 1   MIHFILLFSRQGKLRLQKWYITLPDK---------ERKKITREIVQIILSRGHRTSSFVD 51
           MIH + L +  G + L+K + ++  +         + K    E V  ++S  H       
Sbjct: 1   MIHSLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHY----- 55

Query: 52  WKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAY 111
              L  +Y+    L+F   I+ +   L  +E +HR  +    YFG   E  I  N    Y
Sbjct: 56  ---LISIYRD--KLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVY 110

Query: 112 FILDEFIIGGEIQETSKKIAVKAIEDSDMLQETM 145
            +L+E +  G    T   I  + I+   +L+  +
Sbjct: 111 ELLEEMLDNGFPLATESNILKELIKPPTILRSVV 144


>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
           sapiens]
          Length = 423

 Score = 36.6 bits (83), Expect = 0.009
 Identities = 23/91 (25%), Positives = 41/91 (45%)

Query: 54  ELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFI 113
           ++  ++ ++++LY         N  L    +++ +E+  +YF  + E  I  NF   Y +
Sbjct: 54  QVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYEL 113

Query: 114 LDEFIIGGEIQETSKKIAVKAIEDSDMLQET 144
           LDE +  G  Q T  KI  + I       ET
Sbjct: 114 LDELMDFGFPQTTDSKILQEYITQQSNKLET 144


>gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Homo
           sapiens]
          Length = 453

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 21/73 (28%), Positives = 35/73 (47%)

Query: 58  VYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEF 117
           ++ R++ LY         +    LE++ R   LL  Y G++ E  I  N    Y +LDE 
Sbjct: 57  IHIRHSGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEV 116

Query: 118 IIGGEIQETSKKI 130
           +  G +Q TS ++
Sbjct: 117 LDYGYVQTTSTEM 129


>gi|194473724 adaptor-related protein complex 1, mu 1 subunit
           isoform 1 [Homo sapiens]
          Length = 435

 Score = 32.7 bits (73), Expect = 0.13
 Identities = 22/90 (24%), Positives = 40/90 (44%)

Query: 55  LKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFIL 114
           ++ ++ ++ +LY     +      L    +++ V++  +YF  + E  I  NF   Y +L
Sbjct: 55  VRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELL 114

Query: 115 DEFIIGGEIQETSKKIAVKAIEDSDMLQET 144
           DE +  G  Q T  KI  + I       ET
Sbjct: 115 DELMDFGYPQTTDSKILQEYITQEGHKLET 144


>gi|14210504 adaptor-related protein complex 1, mu 1 subunit isoform
           2 [Homo sapiens]
          Length = 423

 Score = 32.7 bits (73), Expect = 0.13
 Identities = 22/90 (24%), Positives = 40/90 (44%)

Query: 55  LKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFIL 114
           ++ ++ ++ +LY     +      L    +++ V++  +YF  + E  I  NF   Y +L
Sbjct: 55  VRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELL 114

Query: 115 DEFIIGGEIQETSKKIAVKAIEDSDMLQET 144
           DE +  G  Q T  KI  + I       ET
Sbjct: 115 DELMDFGYPQTTDSKILQEYITQEGHKLET 144


>gi|193083168 ectonucleoside triphosphate diphosphohydrolase 4
           isoform b [Homo sapiens]
          Length = 608

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 119 IGGEIQETSKKIAVKAIEDSDMLQETMEEYMNK 151
           I  EIQ+  + I ++   D D+ +ET++ +MNK
Sbjct: 365 IKDEIQQNGQTIYLRGTGDFDLCRETIQPFMNK 397


>gi|4758662 ectonucleoside triphosphate diphosphohydrolase 4 isoform
           a [Homo sapiens]
          Length = 616

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 119 IGGEIQETSKKIAVKAIEDSDMLQETMEEYMNK 151
           I  EIQ+  + I ++   D D+ +ET++ +MNK
Sbjct: 373 IKDEIQQNGQTIYLRGTGDFDLCRETIQPFMNK 405


>gi|196114970 protein tyrosine phosphatase, non-receptor type 12
           isoform 3 [Homo sapiens]
          Length = 650

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 96  GNVCELDIIFNFEKAYFILDEFIIGGEIQE--TSKKIAVKAIEDSDMLQETMEEYMNK 151
           G +C +D  +N  KA  I +EF +   IQE  T +  AV+  E  +++   + +   K
Sbjct: 109 GAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEK 166


>gi|196114967 protein tyrosine phosphatase, non-receptor type 12
           isoform 2 [Homo sapiens]
          Length = 661

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 96  GNVCELDIIFNFEKAYFILDEFIIGGEIQE--TSKKIAVKAIEDSDMLQETMEEYMNK 151
           G +C +D  +N  KA  I +EF +   IQE  T +  AV+  E  +++   + +   K
Sbjct: 120 GAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEK 177


>gi|196114951 protein tyrosine phosphatase, non-receptor type 12
           isoform 1 [Homo sapiens]
          Length = 780

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 96  GNVCELDIIFNFEKAYFILDEFIIGGEIQE--TSKKIAVKAIEDSDMLQETMEEYMNK 151
           G +C +D  +N  KA  I +EF +   IQE  T +  AV+  E  +++   + +   K
Sbjct: 239 GAICAIDYTWNLLKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEK 296


>gi|6912268 binder of Arl Two [Homo sapiens]
          Length = 163

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 10/41 (24%), Positives = 24/41 (58%)

Query: 54 ELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKY 94
          E +L+ + +   Y+    + ++N+L+   I + Y+ L++KY
Sbjct: 36 EFQLLQRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKY 76


>gi|4758638 peroxiredoxin 6 [Homo sapiens]
          Length = 224

 Score = 27.3 bits (59), Expect = 5.3
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 5   ILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKE 54
           + +F    KL+L   Y     +   +I R ++ + L+   R ++ VDWK+
Sbjct: 134 VFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKD 183


>gi|55770832 cerebellar degeneration-related protein 2 [Homo
           sapiens]
          Length = 454

 Score = 27.3 bits (59), Expect = 5.3
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 18/94 (19%)

Query: 8   FSRQGKLRLQKWYITLPDKERKKITREIVQIILS--------RGHRTSSFVDWKELKLVY 59
           F    +  L++ ++T+P+  RK + R   + ILS        +GH  +     +  K V 
Sbjct: 283 FKEPSQSLLEEMFLTVPESHRKPLKRSSSETILSSLAGSDIVKGHEETCI---RRAKAVK 339

Query: 60  KRYASLYFCCAIENQDNELLTLEIVHRYVELLDK 93
           +R  SL     +   D +   L++  +Y ELL K
Sbjct: 340 QRGISL-----LHEVDTQYSALKV--KYEELLKK 366


>gi|11863154 archain isoform 1 [Homo sapiens]
          Length = 511

 Score = 26.6 bits (57), Expect = 9.1
 Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 48  SFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNF 107
           +FV+ + ++ VY+    LY         N L  LE +  +  ++ +Y   + E +I  + 
Sbjct: 47  TFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHC 106

Query: 108 EKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQE 143
               F  DE +  G  +E      ++   + D  +E
Sbjct: 107 FDLIFAFDEIVALG-YRENVNLAQIRTFTEMDSHEE 141


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.141    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,234,782
Number of Sequences: 37866
Number of extensions: 203103
Number of successful extensions: 620
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 592
Number of HSP's gapped (non-prelim): 32
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.