CHRNA1 36655

Name: CHRNA1	Sequence: fasta or formatted (482aa)		NCBI GI: 87567783
Description: nicotinic cholinergic receptor alpha 1 isoform a precursor		Referenced in: Acetylcholine
Other entries for this name: alt prot [457aa] nicotinic cholinergic receptor alpha 1 isoform b precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.3 16 3 C cysteine 1.7 8 2 D aspartate 5.2 25 2 E glutamate 5.0 24 1 F phenylalanine 5.0 24 2 G glycine 5.0 24 2 H histidine 2.9 14 2 I isoleucine 8.7 42 3 K lysine 5.4 26 2 L leucine 10.0 48 4 M methionine 3.3 16 1 N asparagine 3.7 18 2 P proline 6.4 31 3 Q glutamine 3.1 15 2 R arginine 2.7 13 1 S serine 7.5 36 2 T threonine 6.0 29 2 V valine 10.0 48 2 W tryptophan 2.1 10 1 Y tyrosine 3.1 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nicotinic cholinergic receptor alpha 1 isoform a pre... CHRNA1 0.931 nicotinic cholinergic receptor alpha 1 isoform b prec... CHRNA3 0.426 cholinergic receptor, nicotinic, alpha 3 CHRNA2 0.403 cholinergic receptor, nicotinic, alpha polypeptide ... CHRNA6 0.402 cholinergic receptor, nicotinic, alpha 6 CHRNA4 0.377 cholinergic receptor, nicotinic, alpha 4 subunit prec... CHRNA5 0.364 cholinergic receptor, nicotinic, alpha 5 CHRNB2 0.353 neuronal nicotinic acetylcholine receptor beta 2 prec... CHRNB3 0.350 cholinergic receptor, nicotinic, beta polypeptide 3 [... CHRNB4 0.348 cholinergic receptor, nicotinic, beta 4 CHRNA7 0.288 cholinergic receptor, nicotinic, alpha 7 precursor [H... CHRNB1 0.288 nicotinic acetylcholine receptor beta 1 subunit prec... CHRNA9 0.280 cholinergic receptor, nicotinic, alpha 9 precursor [... CHRND 0.275 nicotinic acetylcholine receptor delta polypeptide pr... CHRNA10 0.267 cholinergic receptor, nicotinic, alpha 10 CHRNG 0.233 cholinergic receptor, nicotinic, gamma polypeptide p... CHRNE 0.230 nicotinic acetylcholine receptor epsilon polypeptide ... CHRFAM7A 0.209 CHRNA7-FAM7A fusion isoform 1 HTR3A 0.172 5-hydroxytryptamine (serotonin) receptor 3A isoform... HTR3A 0.169 5-hydroxytryptamine (serotonin) receptor 3A isoform... HTR3A 0.157 5-hydroxytryptamine (serotonin) receptor 3A isoform... CHRFAM7A 0.156 CHRNA7-FAM7A fusion isoform 2 HTR3E 0.098 5-hydroxytryptamine receptor 3 subunit E HTR3B 0.094 5-hydroxytryptamine (serotonin) receptor 3B precursor... HTR3C 0.091 5-hydroxytryptamine receptor 3 subunit C HTR3D 0.053 5-hydroxytryptamine receptor 3 subunit D isoform 1 ... GLRA2 0.041 glycine receptor, alpha 2 isoform B GLRA2 0.041 glycine receptor, alpha 2 isoform A GLRA2 0.041 glycine receptor, alpha 2 isoform A GLRA3 0.038 glycine receptor, alpha 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.