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Search of human proteins with 87298843
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|87298843 ethanolamine kinase 1 isoform B [Homo sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|87298843 ethanolamine kinase 1 isoform B [Homo sapiens] 525 e-149
gi|10092615 ethanolamine kinase 1 isoform A [Homo sapiens] 466 e-131
gi|186659525 ethanolamine kinase 2 [Homo sapiens] 165 3e-41
gi|47078278 choline kinase alpha isoform b [Homo sapiens] 36 0.029
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 36 0.038
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 36 0.038
gi|27502407 CD46 antigen, complement regulatory protein isoform ... 36 0.038
gi|27502402 CD46 antigen, complement regulatory protein isoform ... 36 0.038
gi|24432108 CD46 antigen, complement regulatory protein isoform ... 36 0.038
gi|27502423 CD46 antigen, complement regulatory protein isoform ... 36 0.038
gi|41872374 polo-like kinase 3 [Homo sapiens] 34 0.11
gi|60460889 Myb protein P42POP [Homo sapiens] 33 0.25
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 33 0.25
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ... 33 0.32
gi|113205091 BAI1-associated protein 2-like 2 [Homo sapiens] 33 0.32
gi|4506259 prostaglandin E receptor 4, subtype EP4 [Homo sapiens] 32 0.55
gi|239757677 PREDICTED: hypothetical protein [Homo sapiens] 32 0.55
gi|239752167 PREDICTED: hypothetical protein [Homo sapiens] 32 0.55
gi|239746688 PREDICTED: hypothetical protein [Homo sapiens] 32 0.55
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens] 32 0.55
gi|253683544 POM121 membrane glycoprotein-like 2 [Homo sapiens] 32 0.72
gi|239756916 PREDICTED: hypothetical protein [Homo sapiens] 32 0.72
gi|239752710 PREDICTED: similar to coiled-coil-helix-coiled-coil... 32 0.72
gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo ... 32 0.72
gi|239747238 PREDICTED: similar to coiled-coil-helix-coiled-coil... 32 0.72
gi|239745917 PREDICTED: hypothetical protein XP_002343616 [Homo ... 32 0.72
gi|239741059 PREDICTED: similar to coiled-coil-helix-coiled-coil... 32 0.72
gi|110832843 TBP-associated factor 4 [Homo sapiens] 32 0.72
gi|27502411 CD46 antigen, complement regulatory protein isoform ... 32 0.72
gi|27502409 CD46 antigen, complement regulatory protein isoform ... 32 0.72
>gi|87298843 ethanolamine kinase 1 isoform B [Homo sapiens]
Length = 258
Score = 525 bits (1352), Expect = e-149
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT 60
MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT
Sbjct: 1 MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT 60
Query: 61 EGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCRE 120
EGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCRE
Sbjct: 61 EGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCRE 120
Query: 121 GALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRD 180
GALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRD
Sbjct: 121 GALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRD 180
Query: 181 EEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFSLSSLTLCKGKTT 240
EEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFSLSSLTLCKGKTT
Sbjct: 181 EEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFSLSSLTLCKGKTT 240
Query: 241 RCFGLTGCRGSRLLLSFF 258
RCFGLTGCRGSRLLLSFF
Sbjct: 241 RCFGLTGCRGSRLLLSFF 258
>gi|10092615 ethanolamine kinase 1 isoform A [Homo sapiens]
Length = 452
Score = 466 bits (1198), Expect = e-131
Identities = 230/236 (97%), Positives = 231/236 (97%)
Query: 1 MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT 60
MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT
Sbjct: 1 MLCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGT 60
Query: 61 EGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCRE 120
EGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCRE
Sbjct: 61 EGSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVPKLNVTVQDQEEHRCRE 120
Query: 121 GALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRD 180
GALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRD
Sbjct: 121 GALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYVGNTMEDVVLVRIYGNKTELLVDRD 180
Query: 181 EEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFSLSSLTLCK 236
EEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIF L + L K
Sbjct: 181 EEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFRLIARQLAK 236
>gi|186659525 ethanolamine kinase 2 [Homo sapiens]
Length = 386
Score = 165 bits (418), Expect = 3e-41
Identities = 76/148 (51%), Positives = 101/148 (68%)
Query: 97 PPGSPEVPKLNVTVQDQEEHRCREGALSLLQHLRPHWDPQEVTLQLFTDGITNKLIGCYV 156
PPG P + + GAL L+Q LRPHW P++V + FTDGITNKL+ CYV
Sbjct: 42 PPGPPRAAAVAYFGISVDPDDILPGALRLIQELRPHWKPEQVRTKRFTDGITNKLVACYV 101
Query: 157 GNTMEDVVLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEAL 216
M+D VLVR+YG +TELLVDR+ EV++F++L+AH CAP+LYCTF NGLCYE++QG AL
Sbjct: 102 EEDMQDCVLVRVYGERTELLVDRENEVRNFQLLRAHSCAPKLYCTFQNGLCYEYMQGVAL 161
Query: 217 DPKHVCNPAIFSLSSLTLCKGKTTRCFG 244
+P+H+ P +F L +L + K T G
Sbjct: 162 EPEHIREPRLFRLIALEMAKIHTIHANG 189
>gi|47078278 choline kinase alpha isoform b [Homo sapiens]
Length = 439
Score = 36.2 bits (82), Expect = 0.029
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 11/142 (7%)
Query: 96 VPPGSPEVPKLNVTVQDQEEHRCREGALSLLQHLRPH-WD---PQEVTLQLFTDGITNKL 151
+P P+ P +Q E R R A + P W E + + G++N L
Sbjct: 65 LPLPLPQPPPPQPPADEQPEPRTRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNML 124
Query: 152 IGCYVGNTMEDV------VLVRIYGNKTELLVDRDE-EVKSFRVLQAHGCAPQLYCTFNN 204
C + +T + VL+R+YG ++ + E F +L P+LY F
Sbjct: 125 FQCSLPDTTATLGDEPRKVLLRLYGAILQMGAEAMVLESVMFAILAERSLGPKLYGIFPQ 184
Query: 205 GLCYEFIQGEALDPKHVCNPAI 226
G +FI LD + + P I
Sbjct: 185 GRLEQFIPSRRLDTEELSLPDI 206
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 35.8 bits (81), Expect = 0.038
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 18 ERAGLSSAAVQTRIGNSAASRRSPAA----------RPPVPAPPALPRGRPGTEGSTSLS 67
+ + ++AA AA+ +PAA +PP P PP P P E + S
Sbjct: 93 QESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPAS 152
Query: 68 APAVLVVAVAVVVVVVSAVAWA 89
A + A VV S VA A
Sbjct: 153 AATIAAAAATAVVAPTSTVAVA 174
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 35.8 bits (81), Expect = 0.038
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 18 ERAGLSSAAVQTRIGNSAASRRSPAA----------RPPVPAPPALPRGRPGTEGSTSLS 67
+ + ++AA AA+ +PAA +PP P PP P P E + S
Sbjct: 93 QESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPAS 152
Query: 68 APAVLVVAVAVVVVVVSAVAWA 89
A + A VV S VA A
Sbjct: 153 AATIAAAAATAVVAPTSTVAVA 174
>gi|27502407 CD46 antigen, complement regulatory protein isoform 3
precursor [Homo sapiens]
Length = 377
Score = 35.8 bits (81), Expect = 0.038
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 24 SAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVV 83
S + T+ S+AS P +PPV P P+ G S + AV+V+A+ V V V+
Sbjct: 287 STSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVI 346
Query: 84 SAVAW 88
V +
Sbjct: 347 CVVPY 351
>gi|27502402 CD46 antigen, complement regulatory protein isoform 1
precursor [Homo sapiens]
Length = 392
Score = 35.8 bits (81), Expect = 0.038
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 24 SAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVV 83
S + T+ S+AS P +PPV P P+ G S + AV+V+A+ V V V+
Sbjct: 302 STSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVI 361
Query: 84 SAVAW 88
V +
Sbjct: 362 CVVPY 366
>gi|24432108 CD46 antigen, complement regulatory protein isoform 4
precursor [Homo sapiens]
Length = 384
Score = 35.8 bits (81), Expect = 0.038
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 24 SAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVV 83
S + T+ S+AS P +PPV P P+ G S + AV+V+A+ V V V+
Sbjct: 287 STSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVI 346
Query: 84 SAVAW 88
V +
Sbjct: 347 CVVPY 351
>gi|27502423 CD46 antigen, complement regulatory protein isoform 2
precursor [Homo sapiens]
Length = 399
Score = 35.8 bits (81), Expect = 0.038
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 24 SAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVV 83
S + T+ S+AS P +PPV P P+ G S + AV+V+A+ V V V+
Sbjct: 302 STSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVI 361
Query: 84 SAVAW 88
V +
Sbjct: 362 CVVPY 366
>gi|41872374 polo-like kinase 3 [Homo sapiens]
Length = 646
Score = 34.3 bits (77), Expect = 0.11
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 2 LCGRPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTE 61
L GR + S ++ E +GL S ++T +G+ A +PAA P P +
Sbjct: 351 LFGRKKKSKNHAQERDEVSGLVSGLMRTSVGHQDARPEAPAASGPAPVSLVETAPEDSSP 410
Query: 62 GSTSLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEVP 104
T S+ + V VV SA+ A+ N I P + + P
Sbjct: 411 RGTLASSGDGFEEGLTVATVVESALC-ALRNCIAFMPPAEQNP 452
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 33.1 bits (74), Expect = 0.25
Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 24/131 (18%)
Query: 7 RSSSDNRNFLRERAGLS-----------SAAVQTRIGNSAASRRSPAARPPVPAPPALPR 55
R+ + N +RE AG SA + G S P PP P PP P
Sbjct: 264 RAQQETANAIRELAGTLRQGLAKLSEALSALLPLLPGTPVDSLPPPLPPPPPPPPPPRPV 323
Query: 56 GRPGTEGSTSLSAPAVLVV--AVAVVVVVVSAVAWAMANYIHVP---PGSPEVPKLNVTV 110
P AP V + V+VV VV A I P G+P P +
Sbjct: 324 LPP--------PAPKVEITPEPVSVVAAVVDGAVVAARGVIIAPRSEEGAPRPPPAPLPP 375
Query: 111 QDQEEHRCREG 121
D H+ R+G
Sbjct: 376 HDSPPHKRRKG 386
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 33.1 bits (74), Expect = 0.25
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 32 GNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVVSAVAWAMA 91
G +AA+ PA PP P PPA P G+ L P + AV+ V AV + A
Sbjct: 30 GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFA 89
Query: 92 NY 93
+
Sbjct: 90 KH 91
Score = 28.9 bits (63), Expect = 4.6
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 26 AVQTRIGNSAASRRSPAARPP-------VPAPPALPRGRPGTE-GSTSLSAPAVLVVAVA 77
A++ + +AA+ +P A PP P PP L G PG + +PAVL AV
Sbjct: 23 ALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVE 82
Query: 78 VVV 80
VV
Sbjct: 83 AVV 85
>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
sapiens]
Length = 817
Score = 32.7 bits (73), Expect = 0.32
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 10 SDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPA 52
+D+R L GL AA ++ + S+RS +PP P PPA
Sbjct: 218 ADSRTGLHRGPGLPRAAGVPQVNSKLVSKRSRVFQPPPPPPPA 260
>gi|113205091 BAI1-associated protein 2-like 2 [Homo sapiens]
Length = 529
Score = 32.7 bits (73), Expect = 0.32
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 6 PRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPA---ARPPVPAPPALPRGRPGTEG 62
P S + + L +R G S A + G S + R+P+ +R P PAPP LP R + G
Sbjct: 423 PLRGSHSLDDLLDRPGNSIAPSEYWDGQSRS--RTPSRVPSRAPSPAPPPLPSSRRSSMG 480
Query: 63 STSLS 67
ST+++
Sbjct: 481 STAVA 485
>gi|4506259 prostaglandin E receptor 4, subtype EP4 [Homo sapiens]
Length = 488
Score = 32.0 bits (71), Expect = 0.55
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 12 NRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGSTSLSAPAV 71
+R F+R R L + S ASR PAA P +P R R + + +
Sbjct: 214 HRQFMR-RTSLGTEQHHAAAAASVASRGHPAASPALPRLSDFRRRRSFRRIAGAEIQMVI 272
Query: 72 LVVAVAVVVVVVS--AVAWAMANYIHVPPGSPEVPK 105
L++A ++VV++ S V N ++ P EV K
Sbjct: 273 LLIATSLVVLICSIPLVVRVFVNQLYQPSLEREVSK 308
>gi|239757677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 32.0 bits (71), Expect = 0.55
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 17 RERAGLSSAAVQTRIGNSAASRRSPAARPP---VPAPPALPRGRPGTEGSTSLSAPA 70
R R+ S V R S S R P A PP +PP LP P + G L P+
Sbjct: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPS 89
>gi|239752167 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 32.0 bits (71), Expect = 0.55
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 17 RERAGLSSAAVQTRIGNSAASRRSPAARPP---VPAPPALPRGRPGTEGSTSLSAPA 70
R R+ S V R S S R P A PP +PP LP P + G L P+
Sbjct: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPS 89
>gi|239746688 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 32.0 bits (71), Expect = 0.55
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 17 RERAGLSSAAVQTRIGNSAASRRSPAARPP---VPAPPALPRGRPGTEGSTSLSAPA 70
R R+ S V R S S R P A PP +PP LP P + G L P+
Sbjct: 33 RARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPS 89
>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
Length = 434
Score = 32.0 bits (71), Expect = 0.55
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 17/97 (17%)
Query: 12 NRNFLRERAGLSSAAVQTRIGNS---AASRRSPAARPPVPAPPALPRGRPG--TEGSTSL 66
N + LSS A+Q R + A +PAA P APPA P P T T L
Sbjct: 306 NHGIAQTHTTLSSQALQPRPVSQQELVAPAGAPAAPPTNAAPPAAPPPPPPHLTPEITPL 365
Query: 67 SA------------PAVLVVAVAVVVVVVSAVAWAMA 91
SA P V + VAV V V+ VA +MA
Sbjct: 366 SAALAQTIAQGMAPPPVSMAPVAVSVAPVAPVAVSMA 402
>gi|253683544 POM121 membrane glycoprotein-like 2 [Homo sapiens]
Length = 1035
Score = 31.6 bits (70), Expect = 0.72
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 14 NFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGR--PGTEGSTSLSAPAV 71
N + + L A G + + SP P +P PP + PGT + +A +
Sbjct: 407 NLRKMQKSLGPLASPQSTGEATSVAHSPLKTPSLPTPPGCSQSELLPGTSPDSKPTATFI 466
Query: 72 LVVAVAVVVVVVSAV---AWAMANYIHVPPGSPEVPKLNVTV 110
L+ + + V + + A+ +PP P P + T+
Sbjct: 467 LLTPTSPTLPVTDTTWPPSTSQADRSPMPPDPPAPPTIQSTL 508
>gi|239756916 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 31.6 bits (70), Expect = 0.72
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 5 RPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGST 64
RP+ D R AG S+A + R R PA R P P+ RG G G+T
Sbjct: 403 RPQGRRDGRGAGTRGAGRSAAGDEARA-------RGPAGRAPSPSAALSGRGDRGRTGAT 455
Query: 65 SLSAP 69
+P
Sbjct: 456 RCGSP 460
>gi|239752710 PREDICTED: similar to
coiled-coil-helix-coiled-coil-helix domain containing 2
[Homo sapiens]
Length = 184
Score = 31.6 bits (70), Expect = 0.72
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 12 NRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPP-------ALPRGRPGTEGST 64
+R+ A +S A Q R AA R +P A+PP APP A PR +PG
Sbjct: 38 SRSHTSRMAPPASRAPQMR----AAPRPAPVAQPPAAAPPSTVGSSAAAPR-QPGLMAQM 92
Query: 65 SLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEV 103
+ +A V V AV ++ A+ + + P P++
Sbjct: 93 ATTAAGV-AVGSAVGHILGHAITGGFSGGSNAEPARPDI 130
>gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo
sapiens]
Length = 490
Score = 31.6 bits (70), Expect = 0.72
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 5 RPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGST 64
RP+ D R AG S+A + R R PA R P P+ RG G G+T
Sbjct: 429 RPQGRRDGRGAGTRGAGRSAAGDEARA-------RGPAGRAPSPSAALSGRGDRGRTGAT 481
Query: 65 SLSAP 69
+P
Sbjct: 482 RCGSP 486
>gi|239747238 PREDICTED: similar to
coiled-coil-helix-coiled-coil-helix domain containing 2
isoform 3 [Homo sapiens]
Length = 184
Score = 31.6 bits (70), Expect = 0.72
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 12 NRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPP-------ALPRGRPGTEGST 64
+R+ A +S A Q R AA R +P A+PP APP A PR +PG
Sbjct: 38 SRSHTSRMAPPASRAPQMR----AAPRPAPVAQPPAAAPPSTVGSSAAAPR-QPGLMAQM 92
Query: 65 SLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEV 103
+ +A V V AV ++ A+ + + P P++
Sbjct: 93 ATTAAGV-AVGSAVGHILGHAITGGFSGGSNAEPARPDI 130
>gi|239745917 PREDICTED: hypothetical protein XP_002343616 [Homo
sapiens]
Length = 522
Score = 31.6 bits (70), Expect = 0.72
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 5 RPRSSSDNRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPPALPRGRPGTEGST 64
RP+ D R AG S+A + R R PA R P P+ RG G G+T
Sbjct: 461 RPQGRRDGRGAGTRGAGRSAAGDEARA-------RGPAGRAPSPSAALSGRGDRGRTGAT 513
Query: 65 SLSAP 69
+P
Sbjct: 514 RCGSP 518
>gi|239741059 PREDICTED: similar to
coiled-coil-helix-coiled-coil-helix domain containing 2
isoform 3 [Homo sapiens]
Length = 184
Score = 31.6 bits (70), Expect = 0.72
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 12 NRNFLRERAGLSSAAVQTRIGNSAASRRSPAARPPVPAPP-------ALPRGRPGTEGST 64
+R+ A +S A Q R AA R +P A+PP APP A PR +PG
Sbjct: 38 SRSHTSRMAPPASRAPQMR----AAPRPAPVAQPPAAAPPSTVGSSAAAPR-QPGLMAQM 92
Query: 65 SLSAPAVLVVAVAVVVVVVSAVAWAMANYIHVPPGSPEV 103
+ +A V V AV ++ A+ + + P P++
Sbjct: 93 ATTAAGV-AVGSAVGHILGHAITGGFSGGSNAEPARPDI 130
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 31.6 bits (70), Expect = 0.72
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 26 AVQTRIGNSAASRRSPAA--RPPVPAPPALPRG--RPGTEGSTSLSAPAVLVVAVA 77
A + R G R P + RP VPA PA P RP EGS AP AVA
Sbjct: 92 AGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVA 147
>gi|27502411 CD46 antigen, complement regulatory protein isoform 6
precursor [Homo sapiens]
Length = 369
Score = 31.6 bits (70), Expect = 0.72
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 41 PAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVVSAVAW 88
P +PPV P P+ G S + AV+V+A+ V V V+ V +
Sbjct: 289 PTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPY 336
>gi|27502409 CD46 antigen, complement regulatory protein isoform 5
precursor [Homo sapiens]
Length = 362
Score = 31.6 bits (70), Expect = 0.72
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 41 PAARPPVPAPPALPRGRPGTEGSTSLSAPAVLVVAVAVVVVVVSAVAW 88
P +PPV P P+ G S + AV+V+A+ V V V+ V +
Sbjct: 289 PTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPY 336
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,913,710
Number of Sequences: 37866
Number of extensions: 524242
Number of successful extensions: 5717
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 5421
Number of HSP's gapped (non-prelim): 411
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.