Search of human proteins with 84508631

Search of human proteins with 84508631

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|84508631 phosphatidylglycerophosphate synthase 1 [Homo
sapiens]
         (556 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|84508631 phosphatidylglycerophosphate synthase 1 [Homo sapiens]   1109   0.0  
gi|40548403 decapping enzyme Dcp1b [Homo sapiens]                      36   0.081
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]            32   1.2  
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ...    32   1.2  
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             32   2.0  
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5...    30   4.4  
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]        30   4.4  
gi|8567388 period 3 [Homo sapiens]                                     30   7.6  
gi|169166135 PREDICTED: hypothetical protein [Homo sapiens]            30   7.6  
gi|239747656 PREDICTED: similar to mCG116201 [Homo sapiens]            30   7.6  
gi|169165327 PREDICTED: hypothetical protein [Homo sapiens]            30   7.6  
gi|112382220 chloride channel Ka isoform 1 [Homo sapiens]              30   7.6  
gi|112382222 chloride channel Ka isoform 2 [Homo sapiens]              30   7.6  
gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens]           29   9.9  
gi|83582809 integrator complex subunit 10 [Homo sapiens]               29   9.9  
gi|29725635 otopetrin 1 [Homo sapiens]                                 29   9.9  

>gi|84508631 phosphatidylglycerophosphate synthase 1 [Homo sapiens]
          Length = 556

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 556/556 (100%), Positives = 556/556 (100%)

Query: 1   MAVAAAAAAGPVFWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRRRSPWLLLAPLLSP 60
           MAVAAAAAAGPVFWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRRRSPWLLLAPLLSP
Sbjct: 1   MAVAAAAAAGPVFWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRRRSPWLLLAPLLSP 60

Query: 61  AVPQVTSPPCCLCPEGVHRFQWIRNLVPEFGVSSSHVRVLSSPAEFFELMKGQIRVAKRR 120
           AVPQVTSPPCCLCPEGVHRFQWIRNLVPEFGVSSSHVRVLSSPAEFFELMKGQIRVAKRR
Sbjct: 61  AVPQVTSPPCCLCPEGVHRFQWIRNLVPEFGVSSSHVRVLSSPAEFFELMKGQIRVAKRR 120

Query: 121 VVMASLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSILLDFTRGSRGRKNSRTMLL 180
           VVMASLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSILLDFTRGSRGRKNSRTMLL
Sbjct: 121 VVMASLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSILLDFTRGSRGRKNSRTMLL 180

Query: 181 PLLRRFPEQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDS 240
           PLLRRFPEQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDS
Sbjct: 181 PLLRRFPEQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDS 240

Query: 241 YFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQLQGDDTVQVVDGMVHPYKGDRAEYC 300
           YFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQLQGDDTVQVVDGMVHPYKGDRAEYC
Sbjct: 241 YFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQLQGDDTVQVVDGMVHPYKGDRAEYC 300

Query: 301 KAANKRVMDVINSARTRQQMLHAQTFHSNSLLTQEDAAAAGDRRPAPDTWIYPLIQMKPF 360
           KAANKRVMDVINSARTRQQMLHAQTFHSNSLLTQEDAAAAGDRRPAPDTWIYPLIQMKPF
Sbjct: 301 KAANKRVMDVINSARTRQQMLHAQTFHSNSLLTQEDAAAAGDRRPAPDTWIYPLIQMKPF 360

Query: 361 EIQIDEIVTETLLTEAERGAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFG 420
           EIQIDEIVTETLLTEAERGAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFG
Sbjct: 361 EIQIDEIVTETLLTEAERGAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFG 420

Query: 421 AKGVAGAIPAAYVHIERQFFSEVCSLGQQERVQLQEYWRRGWTFHAKGLWLYLAGSSLPC 480
           AKGVAGAIPAAYVHIERQFFSEVCSLGQQERVQLQEYWRRGWTFHAKGLWLYLAGSSLPC
Sbjct: 421 AKGVAGAIPAAYVHIERQFFSEVCSLGQQERVQLQEYWRRGWTFHAKGLWLYLAGSSLPC 480

Query: 481 LTLIGSPNFGYRSVHRDLEAQIAIVTENQALQQQLHQEQEQLYLRSGVVSSATFEQPSRQ 540
           LTLIGSPNFGYRSVHRDLEAQIAIVTENQALQQQLHQEQEQLYLRSGVVSSATFEQPSRQ
Sbjct: 481 LTLIGSPNFGYRSVHRDLEAQIAIVTENQALQQQLHQEQEQLYLRSGVVSSATFEQPSRQ 540

Query: 541 VKLWVKMVTPLIKNFF 556
           VKLWVKMVTPLIKNFF
Sbjct: 541 VKLWVKMVTPLIKNFF 556


>gi|40548403 decapping enzyme Dcp1b [Homo sapiens]
          Length = 617

 Score = 36.2 bits (82), Expect = 0.081
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 512 QQQLHQEQEQLYLRSGVVSSATFEQPSRQVKLWVKMVTPLIK 553
           QQQ  Q+QE+L +R GVV S ++E+P R      K + P I+
Sbjct: 254 QQQQQQQQEKLPIRQGVVRSLSYEEPRRHSPPIEKQLCPAIQ 295


>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 18/37 (48%), Positives = 23/37 (62%)

Query: 13  FWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRRRS 49
           F  R L LL     L + L RL +RL R+R+R+RRRS
Sbjct: 127 FRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRS 163


>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 18/37 (48%), Positives = 23/37 (62%)

Query: 13  FWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRRRS 49
           F  R L LL     L + L RL +RL R+R+R+RRRS
Sbjct: 127 FRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRS 163


>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
           sapiens]
          Length = 231

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 18/37 (48%), Positives = 23/37 (62%)

Query: 13  FWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRRRS 49
           F  R L LL     L + L RL +RL R+R+R+RRRS
Sbjct: 127 FRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRS 163


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 476  SSLPCLTLIGSPNFGYRSVHRDLEAQIAIVTENQALQQQLHQEQEQLYL--RSGVVSSAT 533
            S  PC   IG+P  GY    R ++A         AL ++  Q QEQ+ L  RS      T
Sbjct: 942  SCTPCNIPIGTPVSGYALYQRHIKAM-----HESALLEEQRQRQEQIDLECRSSTSPCGT 996

Query: 534  FEQPSRQ 540
             + P+R+
Sbjct: 997  SKSPNRE 1003


>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
           [Homo sapiens]
          Length = 1218

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%)

Query: 125 SLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSI--LLDFTRGSRGRKNSRTMLLP- 181
           SLYL T      L D L S L++++    P  L++ I  L  + +  RG + +R + L  
Sbjct: 468 SLYLET---LHALEDLLTSLLQRNMT---PQGLQIMIEHLSPWIKSPRGHERARALGLSA 521

Query: 182 -LLRRFPEQVRVSLFHTPHLRGLL 204
            LLR F E +RVS     H  GLL
Sbjct: 522 LLLRYFLEHLRVSALVPFHNLGLL 545


>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
          Length = 1641

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%)

Query: 125 SLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSI--LLDFTRGSRGRKNSRTMLLP- 181
           SLYL T      L D L S L++++    P  L++ I  L  + +  RG + +R + L  
Sbjct: 891 SLYLET---LHALEDLLTSLLQRNMT---PQGLQIMIEHLSPWIKSPRGHERARALGLSA 944

Query: 182 -LLRRFPEQVRVSLFHTPHLRGLL 204
            LLR F E +RVS     H  GLL
Sbjct: 945 LLLRYFLEHLRVSALVPFHNLGLL 968


>gi|8567388 period 3 [Homo sapiens]
          Length = 1201

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 37  RLGRNRDRQRRRSPWLLLAPLLS---PAVPQVTSPPCCL 72
           R G +R +++  SP+ ++  L+    PA P++ S PCCL
Sbjct: 214 RGGEDRKQEKCHSPFRIIPYLIHVHHPAQPELESEPCCL 252


>gi|169166135 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/44 (43%), Positives = 20/44 (45%)

Query: 4   AAAAAAGPVFWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRR 47
           A A  AGP      L   P RPGL AL G    + GR R R  R
Sbjct: 80  APALGAGPCALGARLPRCPSRPGLEALRGLRGFQPGRQRSRGLR 123


>gi|239747656 PREDICTED: similar to mCG116201 [Homo sapiens]
          Length = 591

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 368 VTETLLTEAERGAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFGAKGVAGA 427
           VT   L     G +V+L +      QA   L+LG  + YQ+    P   G  G + V G 
Sbjct: 360 VTARFLPTHLAGRQVHLVSTTGGCHQAEF-LLLGLCSSYQVCSPEPSKKGRCGERRVCGH 418

Query: 428 IPAAYVHIERQ 438
            P+A +  E+Q
Sbjct: 419 EPSACLQAEQQ 429


>gi|169165327 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/44 (43%), Positives = 20/44 (45%)

Query: 4   AAAAAAGPVFWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRQRR 47
           A A  AGP      L   P RPGL AL G    + GR R R  R
Sbjct: 80  APALGAGPCALGARLPRCPSRPGLEALRGLRGFQPGRQRSRGLR 123


>gi|112382220 chloride channel Ka isoform 1 [Homo sapiens]
          Length = 687

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 379 GAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFGAKGVAGAIPAAYVHIERQ 438
           GA ++     FN  Q  +  +  T     +    PE+  F    G+ G +  AY+  +R 
Sbjct: 246 GAFIFRLLAVFNSEQETITSLYKTSFRVDVPFDLPEIFFFVALGGICGVLSCAYLFCQRT 305

Query: 439 FFS 441
           F S
Sbjct: 306 FLS 308


>gi|112382222 chloride channel Ka isoform 2 [Homo sapiens]
          Length = 686

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 379 GAKVYLTTGYFNLTQAYMDLVLGTRAEYQILLASPEVNGFFGAKGVAGAIPAAYVHIERQ 438
           GA ++     FN  Q  +  +  T     +    PE+  F    G+ G +  AY+  +R 
Sbjct: 246 GAFIFRLLAVFNSEQETITSLYKTSFRVDVPFDLPEIFFFVALGGICGVLSCAYLFCQRT 305

Query: 439 FFS 441
           F S
Sbjct: 306 FLS 308


>gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens]
          Length = 362

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 18/44 (40%), Positives = 21/44 (47%)

Query: 18  LGLLPGRPGLAALLGRLSDRLGRNRDRQRRRSPWLLLAPLLSPA 61
           LG   G PGL A L    D  G  R   R R+P   + P L+PA
Sbjct: 113 LGAYAGGPGLVAGLLGSEDHSGWVRPALRARAPDAFVGPALAPA 156


>gi|83582809 integrator complex subunit 10 [Homo sapiens]
          Length = 710

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 44/179 (24%), Positives = 65/179 (36%), Gaps = 13/179 (7%)

Query: 121 VVMASLYLGTGPLEQELVDCLESTLEKSLQAKFPSNLKVSILLDFTRGSRGRKNSRTMLL 180
           VV   + + T  L  +  D  ++   +SL    P  ++  +LL  T           MLL
Sbjct: 75  VVWREISIITSALRNDSQD-KQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLL 133

Query: 181 PLLRRFPEQVRVSLFHTPHLRGLLRLLIPERFNETIGLQHIKVYLFDNSVILSGANLSDS 240
            LLRRFPE V        H  GL   L+     ETI  Q   V  F    +     L  +
Sbjct: 134 LLLRRFPETV------VQHGVGLGEALLEA---ETIEEQESPVNCFRKLFVCDVLPLIIN 184

Query: 241 YFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQLQGDDTVQVVDGMVHPYKGDRAEY 299
               R    +  +   + A+F+   V     +  Q QG    Q    ++ P K    +Y
Sbjct: 185 NHDVRLPANLLYKYLNKAAEFYINYVTRSTQIENQHQG---AQDTSDLMSPSKRSSQKY 240


>gi|29725635 otopetrin 1 [Homo sapiens]
          Length = 612

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 466 AKGLWLYLAGSSLPCLTLIGSPNFGYRSVHRDLEAQIAIVTENQALQQQLHQEQEQL 522
           A G WL   GS L  L   G P + + ++   + A +    +N  + + +H+E E+L
Sbjct: 398 ASGSWLISWGSILAILCAEGHPRYTWYNLPYSILAIVEKYIQNLFIFESIHREPEKL 454


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,327,005
Number of Sequences: 37866
Number of extensions: 901381
Number of successful extensions: 2497
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2484
Number of HSP's gapped (non-prelim): 18
length of query: 556
length of database: 18,247,518
effective HSP length: 107
effective length of query: 449
effective length of database: 14,195,856
effective search space: 6373939344
effective search space used: 6373939344
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.