Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 83921614
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|83921614 cytochrome b5 outer mitochondrial membrane
precursor [Homo sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|83921614 cytochrome b5 outer mitochondrial membrane precursor... 307 2e-84
gi|41281768 cytochrome b-5 isoform 1 [Homo sapiens] 139 7e-34
gi|4503183 cytochrome b-5 isoform 2 [Homo sapiens] 119 1e-27
gi|214831730 fatty acid desaturase 1 [Homo sapiens] 63 8e-11
gi|4758334 fatty acid desaturase 2 [Homo sapiens] 63 8e-11
gi|84875541 cytochrome b5 reductase 4 [Homo sapiens] 58 3e-09
gi|74099704 sulfite oxidase [Homo sapiens] 58 3e-09
gi|74099702 sulfite oxidase [Homo sapiens] 58 3e-09
gi|74099694 sulfite oxidase [Homo sapiens] 58 3e-09
gi|205360949 fatty acid 2-hydroxylase [Homo sapiens] 57 8e-09
gi|13375616 fatty acid desaturase 3 [Homo sapiens] 47 5e-06
gi|126032348 hect domain and RLD 2 [Homo sapiens] 42 2e-04
gi|40255060 cytochrome b5 domain containing 1 [Homo sapiens] 39 0.002
gi|4755125 aquaporin 4 isoform b [Homo sapiens] 35 0.018
gi|4502181 aquaporin 4 isoform a [Homo sapiens] 35 0.018
gi|4502183 aquaporin 5 [Homo sapiens] 32 0.26
gi|4502179 aquaporin 2 [Homo sapiens] 31 0.45
gi|45446752 aquaporin 8 [Homo sapiens] 30 1.00
gi|118026942 zinc finger protein Cezanne [Homo sapiens] 29 1.7
gi|4503817 3-ketodihydrosphingosine reductase precursor [Homo sa... 29 1.7
gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b p... 28 2.2
gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a ... 28 2.2
gi|6912506 major intrinsic protein of lens fiber [Homo sapiens] 28 3.8
gi|86792455 aquaporin 6 [Homo sapiens] 28 3.8
gi|147904948 calcium channel, voltage-dependent, beta 2 subunit ... 27 6.5
gi|45359842 calcium channel, voltage-dependent, beta 2 subunit i... 27 6.5
>gi|83921614 cytochrome b5 outer mitochondrial membrane precursor
[Homo sapiens]
Length = 150
Score = 307 bits (787), Expect = 2e-84
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MSGSMATAEASGSDGKGQEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHP 60
MSGSMATAEASGSDGKGQEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHP
Sbjct: 1 MSGSMATAEASGSDGKGQEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHP 60
Query: 61 GGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPSKNDTCK 120
GGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPSKNDTCK
Sbjct: 61 GGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPSKNDTCK 120
Query: 121 SCWAYWILPIIGAVLLGFLYRYYTSESKSS 150
SCWAYWILPIIGAVLLGFLYRYYTSESKSS
Sbjct: 121 SCWAYWILPIIGAVLLGFLYRYYTSESKSS 150
>gi|41281768 cytochrome b-5 isoform 1 [Homo sapiens]
Length = 134
Score = 139 bits (351), Expect = 7e-34
Identities = 67/133 (50%), Positives = 93/133 (69%), Gaps = 6/133 (4%)
Query: 18 QEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASES 77
++ + +V YY LEE+ K N K WL++H +VYD+T+FL EHPGGEEVL EQAG DA+E+
Sbjct: 3 EQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEN 62
Query: 78 FEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDP----SKNDTCKSCWAYWILPIIGA 133
FEDVGHS+DAREM K + IG++HP D +P+ +K P + D+ S W W++P I A
Sbjct: 63 FEDVGHSTDAREMSKTFIIGELHPDD-RPKL-NKPPETLITTIDSSSSWWTNWVIPAISA 120
Query: 134 VLLGFLYRYYTSE 146
V + +YR Y +E
Sbjct: 121 VAVALMYRLYMAE 133
>gi|4503183 cytochrome b-5 isoform 2 [Homo sapiens]
Length = 98
Score = 119 bits (297), Expect = 1e-27
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 18 QEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASES 77
++ + +V YY LEE+ K N K WL++H +VYD+T+FL EHPGGEEVL EQAG DA+E+
Sbjct: 3 EQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEN 62
Query: 78 FEDVGHSSDAREMLKQYYIGDIHPSD 103
FEDVGHS+DAREM K + IG++HP D
Sbjct: 63 FEDVGHSTDAREMSKTFIIGELHPDD 88
>gi|214831730 fatty acid desaturase 1 [Homo sapiens]
Length = 501
Score = 63.2 bits (152), Expect = 8e-11
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 26 YYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSS 85
Y+ +EVA+R+ +E WLVI +VY+++ F HPGG V+ AG DA++ F +
Sbjct: 76 YFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFV----AF 131
Query: 86 DAREMLKQYYIGDIHPSDLKPESGSKDPSKN 116
+ L + Y+ + +L PE S +P+KN
Sbjct: 132 HINKGLVKKYMNSLLIGELSPEQPSFEPTKN 162
>gi|4758334 fatty acid desaturase 2 [Homo sapiens]
Length = 444
Score = 63.2 bits (152), Expect = 8e-11
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 12 GSDGKGQ-EVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQA 70
G+ G+G E E SV + EE+ K N + WLVI +VY++T++ +HPGG+ V+ A
Sbjct: 5 GNQGEGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYA 64
Query: 71 GVDASESFEDVGHSSD-AREMLKQYYIGDIHPSDLKPESGSKDPSKN 116
G DA+++F + + LK IG +L PE S+D KN
Sbjct: 65 GEDATDAFRAFHPDLEFVGKFLKPLLIG-----ELAPEEPSQDHGKN 106
>gi|84875541 cytochrome b5 reductase 4 [Homo sapiens]
Length = 521
Score = 58.2 bits (139), Expect = 3e-09
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 30 EEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDARE 89
EE+ K N + W+ I G VY+V+ ++ HPGGE+ L+ AG D +E F+ V +
Sbjct: 60 EELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYES 119
Query: 90 MLKQYYIG--DIHPSDLK 105
MLK+ +G I P+ LK
Sbjct: 120 MLKECLVGRMAIKPAVLK 137
>gi|74099704 sulfite oxidase [Homo sapiens]
Length = 545
Score = 57.8 bits (138), Expect = 3e-09
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 14 DGKGQEVETSVTYYRLEEVAKRNSLKE-LWLVIHGRVYDVTRFLNEHPGGEEVLLEQAG- 71
D + + + S Y EEV+ S + +W+ + V+DVT F++ HPGG L+ AG
Sbjct: 72 DHRCRAAQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGG 131
Query: 72 -VDASESFEDVGHSSDAREMLKQYYIGDIHPSD-LKPESGSKDPSKND 117
++ + V + S RE+L QY IG+++P D + P + DP +D
Sbjct: 132 PLEPFWALYAVHNQSHVRELLAQYKIGELNPEDKVAPTVETSDPYADD 179
>gi|74099702 sulfite oxidase [Homo sapiens]
Length = 545
Score = 57.8 bits (138), Expect = 3e-09
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 14 DGKGQEVETSVTYYRLEEVAKRNSLKE-LWLVIHGRVYDVTRFLNEHPGGEEVLLEQAG- 71
D + + + S Y EEV+ S + +W+ + V+DVT F++ HPGG L+ AG
Sbjct: 72 DHRCRAAQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGG 131
Query: 72 -VDASESFEDVGHSSDAREMLKQYYIGDIHPSD-LKPESGSKDPSKND 117
++ + V + S RE+L QY IG+++P D + P + DP +D
Sbjct: 132 PLEPFWALYAVHNQSHVRELLAQYKIGELNPEDKVAPTVETSDPYADD 179
>gi|74099694 sulfite oxidase [Homo sapiens]
Length = 545
Score = 57.8 bits (138), Expect = 3e-09
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 14 DGKGQEVETSVTYYRLEEVAKRNSLKE-LWLVIHGRVYDVTRFLNEHPGGEEVLLEQAG- 71
D + + + S Y EEV+ S + +W+ + V+DVT F++ HPGG L+ AG
Sbjct: 72 DHRCRAAQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGG 131
Query: 72 -VDASESFEDVGHSSDAREMLKQYYIGDIHPSD-LKPESGSKDPSKND 117
++ + V + S RE+L QY IG+++P D + P + DP +D
Sbjct: 132 PLEPFWALYAVHNQSHVRELLAQYKIGELNPEDKVAPTVETSDPYADD 179
>gi|205360949 fatty acid 2-hydroxylase [Homo sapiens]
Length = 372
Score = 56.6 bits (135), Expect = 8e-09
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 31 EVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDV--GHSSDAR 88
EV +R + W+ R+YD++ F+ HPGGE++L +AG D S + HS++AR
Sbjct: 15 EVQRRLAAGACWVRRGARLYDLSSFVRHHPGGEQLLRARAGQDISADLDGPPHRHSANAR 74
Query: 89 EMLKQYYIGDI 99
L+QYY+G++
Sbjct: 75 RWLEQYYVGEL 85
>gi|13375616 fatty acid desaturase 3 [Homo sapiens]
Length = 445
Score = 47.4 bits (111), Expect = 5e-06
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 30 EEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSD-AR 88
E++ + + WLVI RVYD++R+ HPGG ++ DA+++F + R
Sbjct: 26 EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVR 85
Query: 89 EMLKQYYIGDIHPSD 103
+ L+ IG++ P +
Sbjct: 86 KFLQPLLIGELAPEE 100
>gi|126032348 hect domain and RLD 2 [Homo sapiens]
Length = 4834
Score = 42.0 bits (97), Expect = 2e-04
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 24 VTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGH 83
VT R ++ N W VI G+VYD+ F + G +L + AG D + E
Sbjct: 1207 VTLIRKADLENHNKDGGFWTVIDGKVYDIKDFQTQSLTGNSILAQFAGEDPVVALEAALQ 1266
Query: 84 SSDAREMLKQYYIGDIHPSDLK----PESGSKDPSKNDT 118
D RE + + +G D + P+ GS DT
Sbjct: 1267 FEDTRESMHAFCVGQYLEPDQEIVTIPDLGSLSSPLIDT 1305
>gi|40255060 cytochrome b5 domain containing 1 [Homo sapiens]
Length = 228
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 26 YYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGG--EEVLLEQAGVDASESFE 79
Y+ EVA+ N ++LW+ GRVYD+T E+ G + ++E AG D S F+
Sbjct: 19 YFTPAEVAQHNRPEDLWVSYLGRVYDLTSLAQEYKGNLLLKPIVEVAGQDISHWFD 74
>gi|4755125 aquaporin 4 isoform b [Homo sapiens]
Length = 301
Score = 35.4 bits (80), Expect = 0.018
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 123 WAYWILPIIGAVLLGFLYRY 142
W YW+ PIIGAVL G LY Y
Sbjct: 209 WIYWVGPIIGAVLAGGLYEY 228
>gi|4502181 aquaporin 4 isoform a [Homo sapiens]
Length = 323
Score = 35.4 bits (80), Expect = 0.018
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 123 WAYWILPIIGAVLLGFLYRY 142
W YW+ PIIGAVL G LY Y
Sbjct: 231 WIYWVGPIIGAVLAGGLYEY 250
>gi|4502183 aquaporin 5 [Homo sapiens]
Length = 265
Score = 31.6 bits (70), Expect = 0.26
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 123 WAYWILPIIGAVLLGFLYRY 142
W +W+ PI+GAVL LY Y
Sbjct: 204 WVFWVGPIVGAVLAAILYFY 223
>gi|4502179 aquaporin 2 [Homo sapiens]
Length = 271
Score = 30.8 bits (68), Expect = 0.45
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 123 WAYWILPIIGAVLLGFLYRY 142
W +WI P++GA+L LY Y
Sbjct: 202 WVFWIGPLVGAILGSLLYNY 221
>gi|45446752 aquaporin 8 [Homo sapiens]
Length = 261
Score = 29.6 bits (65), Expect = 1.00
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 123 WAYWILPIIGAVLLGFLYRYYTSESKS 149
W YW+ P++ +L+G L R + + K+
Sbjct: 228 WIYWLGPLLAGLLVGLLIRCFIGDGKT 254
>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
Length = 843
Score = 28.9 bits (63), Expect = 1.7
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 51 DVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGS 110
D R PG LLE D + + D E L+Q + G++ PS + GS
Sbjct: 11 DFVRSTGAEPGLARDLLEGKNWDVNAALSDF-------EQLRQVHAGNLPPSFSEGSGGS 63
Query: 111 KDPSK 115
+ P K
Sbjct: 64 RTPEK 68
>gi|4503817 3-ketodihydrosphingosine reductase precursor [Homo
sapiens]
Length = 332
Score = 28.9 bits (63), Expect = 1.7
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 46 HGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPS 102
+ +V +V + E G ++L+ AG+ S FED+ S+ R ++ Y+G ++PS
Sbjct: 98 YNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVSTFER-LMSINYLGSVYPS 153
>gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b
precursor [Homo sapiens]
Length = 1064
Score = 28.5 bits (62), Expect = 2.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 73 DASESFEDVGHSSDAREMLKQYY----IGDIHPSDLKPESGSKDPSKNDTCKSC 122
D+ +SF SS EM K Y IG + P DLKP G + N+ C C
Sbjct: 980 DSPDSF-----SSLDSEMCKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLC 1028
>gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a
precursor [Homo sapiens]
Length = 1094
Score = 28.5 bits (62), Expect = 2.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 73 DASESFEDVGHSSDAREMLKQYY----IGDIHPSDLKPESGSKDPSKNDTCKSC 122
D+ +SF SS EM K Y IG + P DLKP G + N+ C C
Sbjct: 1010 DSPDSF-----SSLDSEMCKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLC 1058
>gi|6912506 major intrinsic protein of lens fiber [Homo sapiens]
Length = 263
Score = 27.7 bits (60), Expect = 3.8
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 81 VGHSSDAREMLKQYYIGDIHPSDLKPESGSKDPSKNDTCKSCWAYWILPIIGAVLLGFLY 140
VG S + YY G + + P + W YW+ PIIG L LY
Sbjct: 164 VGFSLALGHLFGMYYTG----AGMNPARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLLY 219
Query: 141 RY 142
+
Sbjct: 220 DF 221
>gi|86792455 aquaporin 6 [Homo sapiens]
Length = 282
Score = 27.7 bits (60), Expect = 3.8
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 123 WAYWILPIIGAVLLGFLYRY 142
W +W+ P++GA+L +Y +
Sbjct: 214 WVFWVGPLMGALLASLIYNF 233
>gi|147904948 calcium channel, voltage-dependent, beta 2 subunit
isoform 8 [Homo sapiens]
Length = 608
Score = 26.9 bits (58), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 96 IGDIHPSDLK---PESGSKDPSKNDTCKSCWAYW 126
+GDI PS K P SG+K + D K+ +W
Sbjct: 180 LGDIVPSSRKSTPPSSGAKSADEQDQWKTAGLFW 213
>gi|45359842 calcium channel, voltage-dependent, beta 2 subunit
isoform 4 [Homo sapiens]
Length = 636
Score = 26.9 bits (58), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 96 IGDIHPSDLK---PESGSKDPSKNDTCKSCWAYW 126
+GDI PS K P SG+K + D K+ +W
Sbjct: 208 LGDIVPSSRKSTPPSSGAKSADEQDQWKTAGLFW 241
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,853,428
Number of Sequences: 37866
Number of extensions: 247588
Number of successful extensions: 405
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 379
Number of HSP's gapped (non-prelim): 26
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.