Search of human proteins with 82617632

Search of human proteins with 82617632

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|82617632 chloride intracellular channel 5 isoform b [Homo
sapiens]
         (251 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|82617632 chloride intracellular channel 5 isoform b [Homo sap...   510   e-145
gi|166197662 chloride intracellular channel 5 isoform a [Homo sa...   482   e-136
gi|7330335 chloride intracellular channel 4 [Homo sapiens]            391   e-109
gi|27894378 chloride intracellular channel 6 [Homo sapiens]           370   e-103
gi|66346733 chloride intracellular channel 2 [Homo sapiens]           330   7e-91
gi|14251209 chloride intracellular channel 1 [Homo sapiens]           310   1e-84
gi|40288290 chloride intracellular channel 3 [Homo sapiens]           229   1e-60
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]            40   0.003
gi|108773799 ganglioside-induced differentiation-associated prot...    35   0.062
gi|108773797 ganglioside-induced differentiation-associated prot...    35   0.062
gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]           30   1.5  
gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]     30   1.5  
gi|10835073 N-myristoyltransferase 1 [Homo sapiens]                    30   2.0  
gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]    30   2.6  
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa...    29   4.4  
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]     28   7.6  
gi|4826830 methyl CpG binding protein 2 isoform 1 [Homo sapiens]       28   7.6  
gi|153792230 hypothetical protein LOC57670 [Homo sapiens]              28   7.6  
gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]        28   7.6  
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun...    28   7.6  
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]                  28   9.9  
gi|56549643 nucleoporin 98kD isoform 3 [Homo sapiens]                  28   9.9  
gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]                  28   9.9  
gi|21264369 nucleoporin 98kD isoform 2 [Homo sapiens]                  28   9.9  
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa...    28   9.9  
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi...    28   9.9  
gi|18466802 Ras and Rab interactor 2 [Homo sapiens]                    28   9.9  

>gi|82617632 chloride intracellular channel 5 isoform b [Homo
           sapiens]
          Length = 251

 Score =  510 bits (1313), Expect = e-145
 Identities = 251/251 (100%), Positives = 251/251 (100%)

Query: 1   MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 60
           MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP
Sbjct: 1   MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 60

Query: 61  ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS 120
           ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS
Sbjct: 61  ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS 120

Query: 121 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE 180
           KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE
Sbjct: 121 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE 180

Query: 181 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA 240
           LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA
Sbjct: 181 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA 240

Query: 241 YADVAKRLSRS 251
           YADVAKRLSRS
Sbjct: 241 YADVAKRLSRS 251


>gi|166197662 chloride intracellular channel 5 isoform a [Homo
           sapiens]
          Length = 410

 Score =  482 bits (1241), Expect = e-136
 Identities = 238/243 (97%), Positives = 239/243 (98%)

Query: 9   GDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP 68
           G   +PEI LFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP
Sbjct: 168 GAHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP 227

Query: 69  GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN 128
           GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN
Sbjct: 228 GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN 287

Query: 129 TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL 188
           TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL
Sbjct: 288 TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL 347

Query: 189 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248
           LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL
Sbjct: 348 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 407

Query: 249 SRS 251
           SRS
Sbjct: 408 SRS 410


>gi|7330335 chloride intracellular channel 4 [Homo sapiens]
          Length = 253

 Score =  391 bits (1005), Expect = e-109
 Identities = 185/241 (76%), Positives = 216/241 (89%)

Query: 10  DDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPG 69
           +D++P IELFVKAG DGESIGNCPFSQRLFMILWLKGVVF+VTTVDLKRKPADL NLAPG
Sbjct: 13  EDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPG 72

Query: 70  THPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNT 129
           THPPF+TFN +VKTDVNKIEEFLEE L P KY KL+ KH ESNTAG+DIF+KFSAYIKN+
Sbjct: 73  THPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNS 132

Query: 130 KQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLL 189
           + + N ALERGL K L+KLD+YLN+PLP+EID N+  + K S RKFLDG+E+TLADCNLL
Sbjct: 133 RPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLL 192

Query: 190 PKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLS 249
           PKLH+VK+VAKKYRN+DIP EMTG+WRYL NAY+RDEFTNTC +D E+E+AY+DVAKRL+
Sbjct: 193 PKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRLT 252

Query: 250 R 250
           +
Sbjct: 253 K 253


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score =  370 bits (949), Expect = e-103
 Identities = 176/237 (74%), Positives = 207/237 (87%)

Query: 12  RDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTH 71
           ++ +I LFVKAG DGESIGNCPFSQRLFMILWLKGV+FNVTTVDLKRKPADL NLAPGT+
Sbjct: 449 QEHDITLFVKAGYDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKPADLQNLAPGTN 508

Query: 72  PPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQ 131
           PPF+TF+G+VKTDVNKIEEFLEE L P +YPKL  +H ESN+AG D+F+KFSA+IKNTK+
Sbjct: 509 PPFMTFDGEVKTDVNKIEEFLEEKLAPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKK 568

Query: 132 QNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPK 191
             N   E+ L KAL+KLD+YLN+PLP+EIDA +  +   S RKFLDGDELTLADCNLLPK
Sbjct: 569 DANEIHEKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDELTLADCNLLPK 628

Query: 192 LHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248
           LH++KIVAKKYR+++ P+EMTG+WRYL NAYARDEFTNTC AD EIE AY+DVAKR+
Sbjct: 629 LHIIKIVAKKYRDFEFPSEMTGIWRYLNNAYARDEFTNTCPADQEIEHAYSDVAKRM 685


>gi|66346733 chloride intracellular channel 2 [Homo sapiens]
          Length = 247

 Score =  330 bits (846), Expect = 7e-91
 Identities = 158/241 (65%), Positives = 195/241 (80%)

Query: 9   GDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP 68
           G   DPEIELFVKAG DGESIGNCPF QRLFMILWLKGV FNVTTVD+ RKP +L +LAP
Sbjct: 7   GTQVDPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAP 66

Query: 69  GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN 128
           GT+PPFL +N ++KTD  KIEEFLE+TL P +YP L+ K++ES   G ++F+KFSAYIKN
Sbjct: 67  GTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKN 126

Query: 129 TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL 188
           T+++ N   E+ L K  K+LDDYLNTPL +EID ++  E   SRR FLDGD+LTLADC+L
Sbjct: 127 TQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSL 186

Query: 189 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248
           LPKL+++K+ AKKYR++DIPAE +G+WRYL NAYAR+EFT+TC  D EIE  YA+VAK+ 
Sbjct: 187 LPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAKQK 246

Query: 249 S 249
           S
Sbjct: 247 S 247


>gi|14251209 chloride intracellular channel 1 [Homo sapiens]
          Length = 241

 Score =  310 bits (793), Expect = 1e-84
 Identities = 155/239 (64%), Positives = 182/239 (76%), Gaps = 2/239 (0%)

Query: 11  DRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGT 70
           +  P++ELFVKAG DG  IGNCPFSQRLFM+LWLKGV FNVTTVD KR+   +  L PG 
Sbjct: 3   EEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGG 62

Query: 71  HPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTK 130
             PFL +  +V TD NKIEEFLE  L P +YPKLAA + ESNTAG+DIF+KFSAYIKN+ 
Sbjct: 63  QLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSN 122

Query: 131 QQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKG-SRRKFLDGDELTLADCNLL 189
              N  LE+GL KALK LD+YL +PLPEE+D  T  ED+G S+RKFLDG+ELTLADCNLL
Sbjct: 123 PALNDNLEKGLLKALKVLDNYLTSPLPEEVD-ETSAEDEGVSQRKFLDGNELTLADCNLL 181

Query: 190 PKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248
           PKLH+V++V KKYR + IP    G+ RYL NAYAR+EF +TC  D EIELAY  VAK L
Sbjct: 182 PKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240


>gi|40288290 chloride intracellular channel 3 [Homo sapiens]
          Length = 236

 Score =  229 bits (585), Expect = 1e-60
 Identities = 119/229 (51%), Positives = 154/229 (67%), Gaps = 2/229 (0%)

Query: 13  DPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHP 72
           + +++LFVKA  DGES+G+CP  QRLFM+L LKGV F +TTVD +R P  L + APG+  
Sbjct: 3   ETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQL 62

Query: 73  PFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQ 132
           P L ++ D KTD  +IE+FLEETL P  +P LA ++RESNTAG D+F KFSA+IKN    
Sbjct: 63  PILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPA 122

Query: 133 NNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKL 192
            + AL + L +AL +LD YL  PL  E+      + + SRR+FLDGD LTLADC+LLPKL
Sbjct: 123 QDEALYQQLLRALARLDSYLRAPLEHELAGEP--QLRESRRRFLDGDRLTLADCSLLPKL 180

Query: 193 HVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAY 241
           H+V  V   +R   IPAE+ G+ RYL +A    EF  TC   +EI  AY
Sbjct: 181 HIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAY 229


>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
          Length = 241

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 32  CPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP-GTHPPFLTFNGDVKTDVNKIEE 90
           CPF++R  ++L  KG+   V  ++LK KP       P G  P      G +  +     E
Sbjct: 32  CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91

Query: 91  FLEETLTPEKYPKLAAKHRESNTAGIDIFSK----FSAYIKNTKQQNNAALERGLTKALK 146
           +L+E    +K        +      +++FSK      ++I++  +++ A L+    K   
Sbjct: 92  YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151

Query: 147 KLDDYL 152
           KL++ L
Sbjct: 152 KLEEVL 157


>gi|108773799 ganglioside-induced differentiation-associated protein
           1 isoform b [Homo sapiens]
          Length = 290

 Score = 35.0 bits (79), Expect = 0.062
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 124 AYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE---EIDANTCGEDKGSRRKFLDGDE 180
           AYI   K+  +  L+    K LKK+ D L   L +   E+        +  ++ +L G+ 
Sbjct: 116 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 175

Query: 181 LTLADCNLLPKLHVVKIVAKKYRNY 205
            TLAD +L   LH +K +    RN+
Sbjct: 176 FTLADVSLAVTLHRLKFLGFARRNW 200


>gi|108773797 ganglioside-induced differentiation-associated protein
           1 isoform a [Homo sapiens]
          Length = 358

 Score = 35.0 bits (79), Expect = 0.062
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 124 AYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE---EIDANTCGEDKGSRRKFLDGDE 180
           AYI   K+  +  L+    K LKK+ D L   L +   E+        +  ++ +L G+ 
Sbjct: 184 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 243

Query: 181 LTLADCNLLPKLHVVKIVAKKYRNY 205
            TLAD +L   LH +K +    RN+
Sbjct: 244 FTLADVSLAVTLHRLKFLGFARRNW 268


>gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]
          Length = 243

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 32 CPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFL 75
          CP+S R  ++L  K +   V  ++L+ KP   +   P  H P L
Sbjct: 32 CPYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVL 75


>gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]
          Length = 951

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 69  GTHPPFLTFNGDVKTDVNKI---EEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAY 125
           GT    L  + D+  ++N++   E+   ET  P   PK  A H    T   +  + +   
Sbjct: 91  GTDEDDLEADDDLLAELNEVLGEEQKASETPPPVAQPKPEAPHPGLETTLQERLALYQTA 150

Query: 126 IKNTKQQNNAALERGLTKALKKLDDYL 152
           I++ +Q  ++A  R   + LK L++ L
Sbjct: 151 IESARQAGDSAKMRRYDRGLKTLENLL 177


>gi|10835073 N-myristoyltransferase 1 [Homo sapiens]
          Length = 496

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 22/98 (22%), Positives = 44/98 (44%)

Query: 98  PEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLP 157
           P K   L A+  +     I++FS      K  ++ +  + +   T+ + KL + +NT  P
Sbjct: 78  PVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGP 137

Query: 158 EEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVV 195
            E D +   ++  +  +    D L L D  +L +L+ +
Sbjct: 138 VEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTL 175


>gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]
          Length = 216

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 16/164 (9%)

Query: 35  SQRLFMILWLKGVVFNVTTVDL-----KRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIE 89
           S R+ + L LKG+ +    ++L     ++   D   L P    P L  +G        I 
Sbjct: 17  SWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAII 76

Query: 90  EFLEETL-TPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKL 148
           E+LEE   TP   P+   K R S     D+ +     ++N         E  LT A   +
Sbjct: 77  EYLEEMRPTPRLLPQ-DPKKRASVRMISDLIAGGIQPLQNLSVLKQVGEEMQLTWAQNAI 135

Query: 149 DDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKL 192
               N    E+I  +T G        +  GDE+T+AD  L+P++
Sbjct: 136 TCGFNAL--EQILQSTAGI-------YCVGDEVTMADLCLVPQV 170


>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 22/163 (13%)

Query: 14  PEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPP 73
           P I L + +  D  S+   P  + L +   L+ + F++   DLK++ A   NL P     
Sbjct: 396 PFICLSLLSTWDNSSLAMSPGEEILTL---LQTIPFDIE--DLKKEAA---NLPPEDDDQ 447

Query: 74  FLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQN 133
           +L  + D      ++++ L+E +  ++   ++ + +E N    ++     A+I       
Sbjct: 448 WLDLSPD------QLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESMKAFISKVSTHK 501

Query: 134 NAALERGLTKALKKLD--------DYLNTPLPEEIDANTCGED 168
            A L R  ++A    D        D +  P P E D++   ++
Sbjct: 502 GAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDE 544


>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
          Length = 498

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 13/56 (23%), Positives = 26/56 (46%)

Query: 149 DDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRN 204
           +D  + P P+++ ++ C E+K  R   L+ D          P +      A+KY++
Sbjct: 409 EDPTSPPEPQDLSSSVCKEEKMPRGGSLESDGCPKEPAKTQPAVATAATAAEKYKH 464


>gi|4826830 methyl CpG binding protein 2 isoform 1 [Homo sapiens]
          Length = 486

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 13/56 (23%), Positives = 26/56 (46%)

Query: 149 DDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRN 204
           +D  + P P+++ ++ C E+K  R   L+ D          P +      A+KY++
Sbjct: 397 EDPTSPPEPQDLSSSVCKEEKMPRGGSLESDGCPKEPAKTQPAVATAATAAEKYKH 452


>gi|153792230 hypothetical protein LOC57670 [Homo sapiens]
          Length = 1884

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 78  NGDVKTDVNKI-EEFLEETLTPEKYPKLAAKH 108
           + D  TDV  +  + LEET++P  YP + A H
Sbjct: 268 SADRYTDVTTVLSQSLEETISPRTYPTVTASH 299


>gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]
          Length = 5183

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 13/96 (13%)

Query: 73   PFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTK-- 130
            P+L+F      +V K++  +E       + K    H   +   +D F K +A IKN    
Sbjct: 4621 PYLSFG-----EVEKMQILVERFKPYCNFDKYDEDHSGDDKVFLDCFCKIAAGIKNNSNG 4675

Query: 131  -QQNNAALERGLTKALKKLDDYLNTPLP--EEIDAN 163
             Q  +  L++G+T   +   DY+   +P  + +DA+
Sbjct: 4676 HQLKDLILQKGIT---QNALDYMKKHIPSAKNLDAD 4708


>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
           [Homo sapiens]
          Length = 1137

 Score = 28.1 bits (61), Expect = 7.6
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 15/97 (15%)

Query: 76  TFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNA 135
           TF GD+   V K    L   L  +KY  + +  +     G+++  KFS  ++N  ++   
Sbjct: 83  TFGGDLYNTVTKYSGSL---LLQKKYKDVESSLKIEEVDGLELVRKFSEDMENMLRRKVE 139

Query: 136 ALERGLTKALKKLD-----------DYLNTPLPEEID 161
           A++  L +A ++ D           DY N+ L  E D
Sbjct: 140 AVQ-NLVEAAEEADLNHEFNESLVFDYYNSVLINERD 175


>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
          Length = 1726

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 143 KALKKLDDYLNTPLP----EEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIV 198
           KAL     Y  TP P          T G  K      LD DE +LA+   +PK  + K+V
Sbjct: 525 KALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLV 584

Query: 199 AKKYRNYDI 207
            K   N ++
Sbjct: 585 LKNLNNSNL 593


>gi|56549643 nucleoporin 98kD isoform 3 [Homo sapiens]
          Length = 937

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 143 KALKKLDDYLNTPLP----EEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIV 198
           KAL     Y  TP P          T G  K      LD DE +LA+   +PK  + K+V
Sbjct: 542 KALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLV 601

Query: 199 AKKYRNYDI 207
            K   N ++
Sbjct: 602 LKNLNNSNL 610


>gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]
          Length = 1800

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 143 KALKKLDDYLNTPLP----EEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIV 198
           KAL     Y  TP P          T G  K      LD DE +LA+   +PK  + K+V
Sbjct: 525 KALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLV 584

Query: 199 AKKYRNYDI 207
            K   N ++
Sbjct: 585 LKNLNNSNL 593


>gi|21264369 nucleoporin 98kD isoform 2 [Homo sapiens]
          Length = 920

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 143 KALKKLDDYLNTPLP----EEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIV 198
           KAL     Y  TP P          T G  K      LD DE +LA+   +PK  + K+V
Sbjct: 525 KALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLV 584

Query: 199 AKKYRNYDI 207
            K   N ++
Sbjct: 585 LKNLNNSNL 593


>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
           sapiens]
          Length = 601

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 17/122 (13%)

Query: 55  DLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTA 114
           DLK++ A   NL P     +L  + D      ++++ L+E +  ++   ++ + +E N  
Sbjct: 356 DLKKEAA---NLPPEDDDQWLDLSPD------QLDQLLQEAVGKKESESVSKEEKEQNYD 406

Query: 115 GIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLD--------DYLNTPLPEEIDANTCG 166
             ++     A+I        A L R  ++A    D        D +  P P E D++   
Sbjct: 407 LTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLD 466

Query: 167 ED 168
           ++
Sbjct: 467 DE 468


>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
           sapiens]
          Length = 644

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 17/122 (13%)

Query: 55  DLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTA 114
           DLK++ A   NL P     +L  + D      ++++ L+E +  ++   ++ + +E N  
Sbjct: 399 DLKKEAA---NLPPEDDDQWLDLSPD------QLDQLLQEAVGKKESESVSKEEKEQNYD 449

Query: 115 GIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLD--------DYLNTPLPEEIDANTCG 166
             ++     A+I        A L R  ++A    D        D +  P P E D++   
Sbjct: 450 LTEVSESMKAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLD 509

Query: 167 ED 168
           ++
Sbjct: 510 DE 511


>gi|18466802 Ras and Rab interactor 2 [Homo sapiens]
          Length = 895

 Score = 27.7 bits (60), Expect = 9.9
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 208 PAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLS 249
           PAE   + R+    Y+ +E   TCA DS     Y  ++ RLS
Sbjct: 48  PAETHSMVRHKDGGYSEEEDVKTCARDS----GYDSLSNRLS 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,347,489
Number of Sequences: 37866
Number of extensions: 397894
Number of successful extensions: 901
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 884
Number of HSP's gapped (non-prelim): 29
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.