Search of human proteins with 82617624

Search of human proteins with 82617624

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|82617624 beta-carotene dioxygenase 2 isoform a [Homo
sapiens]
         (579 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|82617624 beta-carotene dioxygenase 2 isoform a [Homo sapiens]     1206   0.0  
gi|82617628 beta-carotene dioxygenase 2 isoform b [Homo sapiens]     1137   0.0  
gi|4506591 retinal pigment epithelium-specific protein 65kDa [Ho...   428   e-120
gi|74027270 beta-carotene 15,15'-monooxygenase [Homo sapiens]         416   e-116
gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo...    32   1.2  
gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo ...    32   1.2  
gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo s...    32   1.2  
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    31   2.7  
gi|13994268 ubiquitin-specific protease 26 [Homo sapiens]              30   4.7  
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   7.9  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      30   7.9  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      30   7.9  
gi|110349715 titin isoform N2-B [Homo sapiens]                         30   7.9  
gi|52630419 sterol regulatory element binding transcription fact...    30   7.9  
gi|22547195 sterol regulatory element binding transcription fact...    30   7.9  

>gi|82617624 beta-carotene dioxygenase 2 isoform a [Homo sapiens]
          Length = 579

 Score = 1206 bits (3121), Expect = 0.0
 Identities = 579/579 (100%), Positives = 579/579 (100%)

Query: 1   MFFRVFLHFIRSHSATAVDFLPVMVHRLPVFKRYMGNTPQKKAVFGQCRGLPCVAPLLTT 60
           MFFRVFLHFIRSHSATAVDFLPVMVHRLPVFKRYMGNTPQKKAVFGQCRGLPCVAPLLTT
Sbjct: 1   MFFRVFLHFIRSHSATAVDFLPVMVHRLPVFKRYMGNTPQKKAVFGQCRGLPCVAPLLTT 60

Query: 61  VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT 120
           VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT
Sbjct: 61  VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT 120

Query: 121 YRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNV 180
           YRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNV
Sbjct: 121 YRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNV 180

Query: 181 NYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGN 240
           NYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGN
Sbjct: 181 NYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGN 240

Query: 241 SFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQ 300
           SFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQ
Sbjct: 241 SFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQ 300

Query: 301 PLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQIN 360
           PLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQIN
Sbjct: 301 PLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQIN 360

Query: 361 AFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLN 420
           AFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLN
Sbjct: 361 AFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLN 420

Query: 421 APEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHF 480
           APEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHF
Sbjct: 421 APEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHF 480

Query: 481 FYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITP 540
           FYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITP
Sbjct: 481 FYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITP 540

Query: 541 NQNESNFILVLDAKNFEELGRAEVPVQMPYGFHGTFIPI 579
           NQNESNFILVLDAKNFEELGRAEVPVQMPYGFHGTFIPI
Sbjct: 541 NQNESNFILVLDAKNFEELGRAEVPVQMPYGFHGTFIPI 579


>gi|82617628 beta-carotene dioxygenase 2 isoform b [Homo sapiens]
          Length = 545

 Score = 1137 bits (2942), Expect = 0.0
 Identities = 545/545 (100%), Positives = 545/545 (100%)

Query: 35  MGNTPQKKAVFGQCRGLPCVAPLLTTVEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEF 94
           MGNTPQKKAVFGQCRGLPCVAPLLTTVEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEF
Sbjct: 1   MGNTPQKKAVFGQCRGLPCVAPLLTTVEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEF 60

Query: 95  GKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPC 154
           GKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPC
Sbjct: 61  GKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPC 120

Query: 155 KNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDW 214
           KNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDW
Sbjct: 121 KNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDW 180

Query: 215 SKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSI 274
           SKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSI
Sbjct: 181 SKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSI 240

Query: 275 ASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFH 334
           ASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFH
Sbjct: 241 ASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFH 300

Query: 335 VVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGE 394
           VVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGE
Sbjct: 301 VVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGE 360

Query: 395 GLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQ 454
           GLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQ
Sbjct: 361 GLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQ 420

Query: 455 EDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYP 514
           EDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYP
Sbjct: 421 EDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYP 480

Query: 515 SEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAEVPVQMPYGFHG 574
           SEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAEVPVQMPYGFHG
Sbjct: 481 SEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAEVPVQMPYGFHG 540

Query: 575 TFIPI 579
           TFIPI
Sbjct: 541 TFIPI 545


>gi|4506591 retinal pigment epithelium-specific protein 65kDa [Homo
           sapiens]
          Length = 533

 Score =  428 bits (1100), Expect = e-120
 Identities = 224/524 (42%), Positives = 312/524 (59%), Gaps = 12/524 (2%)

Query: 57  LLTTVEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAK 116
           L  TVEE    ++A V G  P WL GSLLR GPG FE G + + H FDG ALLH+F   +
Sbjct: 15  LFETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKE 74

Query: 117 GTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTD 176
           G VTY  +F+++D Y     + RIVI+EFGT A PDPCKN+F RF S F    +   +TD
Sbjct: 75  GHVTYHRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYF----RGVEVTD 130

Query: 177 NTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAY 236
           N  VN      DYY CTETNF+ K++ ETLE  ++VD   +++VNGATAHPH + DGT Y
Sbjct: 131 NALVNVYPVGEDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVY 190

Query: 237 NMGNSFGP-YGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYI 295
           N+GN FG  +  +Y ++++PP + D  + I   +++     +++ KPSY HSFG+T NYI
Sbjct: 191 NIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYI 250

Query: 296 IFIEQPLKMNLWKIATS-KIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFV 354
           +F+E P+K+NL+K  +S  + G  + D            H+ +K+  + L  +Y + PF 
Sbjct: 251 VFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFN 310

Query: 355 TFHQINAFEDQGCVIIDLCCQDNGRTLEVY-QLQNLRKAGEGLDQVHNSAAKSFPRRFVL 413
            FH IN +ED G +I+DLCC      +  Y  L NLR+  E + +    A +   RR+VL
Sbjct: 311 LFHHINTYEDNGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVL 370

Query: 414 PLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRF 473
           PLN+   A  G NL  L  T+A+A+  +D TIW   E L     +     EFPQI Y ++
Sbjct: 371 PLNID-KADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQ---AFEFPQINYQKY 426

Query: 474 SGKKYHFFYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVI 533
            GK Y + YG G  H V D L K++V  K   VW+E   YPSEP+FV  P   EED GV+
Sbjct: 427 CGKPYTYAYGLGLNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVV 486

Query: 534 LSVVITPNQNES-NFILVLDAKNFEELGRAEVPVQMPYGFHGTF 576
           LSVV++P   +   ++L+L+AK+  E+ RAEV + +P  FHG F
Sbjct: 487 LSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVTFHGLF 530


>gi|74027270 beta-carotene 15,15'-monooxygenase [Homo sapiens]
          Length = 547

 Score =  416 bits (1070), Expect = e-116
 Identities = 215/518 (41%), Positives = 321/518 (61%), Gaps = 23/518 (4%)

Query: 68  ISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQ 127
           + A+V G  P WL G+LLR GPG    G+ +YNHWFDG+ALLH F +  G V YRSK+L+
Sbjct: 16  VRAKVTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGEVYYRSKYLR 75

Query: 128 SDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKG 187
           SDTY  N   NRIV+SEFGT+A PDPCKN+F +  S   L       TDN  +N ++   
Sbjct: 76  SDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFS--YLSHTIPDFTDNCLINIMKCGE 133

Query: 188 DYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNSFGPYG- 246
           D+Y  +ETN++ K++ +TLE  EKVD+ K++AVN AT+HPHYD  G   NMG S    G 
Sbjct: 134 DFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGK 193

Query: 247 FSYKVIRVP---PEKVDLGET-IHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPL 302
             Y + ++P   PE    G++     +V CSI S     PSYYHSFG+T NY+IF+EQP 
Sbjct: 194 TKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPF 253

Query: 303 KMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAF 362
           ++++ K+AT+ IR  +++  +++  +  T  H++++RT Q +  ++Y+   V FH +NA+
Sbjct: 254 RLDILKMATAYIRRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAY 313

Query: 363 EDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFP--RRFVLPLNVSLN 420
           E+ GC++ D+   ++    +++ L NL +     D   NS   S P  RRF +PL+V  N
Sbjct: 314 EEDGCIVFDVIAYEDNSLYQLFYLANLNQ-----DFKENSRLTSVPTLRRFAVPLHVDKN 368

Query: 421 APEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHF 480
           A  G NL  ++ T+A+A+K+ DG ++C  E L++       G+E P++ Y   +GK+Y +
Sbjct: 369 AEVGTNLIKVASTTATALKEEDGQVYCQPEFLYE-------GLELPRVNY-AHNGKQYRY 420

Query: 481 FYGCGFR-HLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVIT 539
            +  G +   +   +IK D++ K+   WRED  +P+EP+FVPAPG  +ED GVILS +++
Sbjct: 421 VFATGVQWSPIPTKIIKYDILTKSSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAIVS 480

Query: 540 PNQNESNFILVLDAKNFEELGRAEVPVQMPYGFHGTFI 577
            +  +  F+L+LDAK+F EL RA V V M    HG FI
Sbjct: 481 TDPQKLPFLLILDAKSFTELARASVDVDMHMDLHGLFI 518


>gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo
            sapiens]
          Length = 1248

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 323  ISWEP---QCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQ 358
            +SW P   QCN RFH++ K  G+   G   S  +V+++Q
Sbjct: 1029 VSWVPKEGQCNFRFHILFKALGEEKGGASLSPQYVSYNQ 1067


>gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo
            sapiens]
          Length = 1253

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 323  ISWEP---QCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQ 358
            +SW P   QCN RFH++ K  G+   G   S  +V+++Q
Sbjct: 1034 VSWVPKEGQCNFRFHILFKALGEEKGGASLSPQYVSYNQ 1072


>gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo
            sapiens]
          Length = 1257

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 323  ISWEP---QCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQ 358
            +SW P   QCN RFH++ K  G+   G   S  +V+++Q
Sbjct: 1034 VSWVPKEGQCNFRFHILFKALGEEKGGASLSPQYVSYNQ 1072


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
            polymerase [Homo sapiens]
          Length = 1327

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 334  HVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQD 376
            H + K   +LL G+  + P++TFH +N    QG +++DL  +D
Sbjct: 1077 HKLIKGVERLLGGQQGTNPYLTFHCVN----QGTILLDLAPED 1115


>gi|13994268 ubiquitin-specific protease 26 [Homo sapiens]
          Length = 913

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 174 MTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYD 230
           + +N +V Y + K D   C   N   ++ ++ LE+ +K++      +N AT +P+ D
Sbjct: 195 LKENNSVEYKKSKADCSRCVSYNREKQLKLKELEENKKLECESSCIMN-ATGNPYLD 250


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 187   GDYYLCTETNFMNKVDIETLEKTEKVDWS-KFIAVNGATAHPHYDLDG 233
             G++ +CT    +NK +IE  +  EK +++ +  A+N A    H D+ G
Sbjct: 22882 GEWTMCTPPTGINKTNIEVEKLLEKHEYNFRICAINKAGVGEHADVPG 22929


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 187   GDYYLCTETNFMNKVDIETLEKTEKVDWS-KFIAVNGATAHPHYDLDG 233
             G++ +CT    +NK +IE  +  EK +++ +  A+N A    H D+ G
Sbjct: 16577 GEWTMCTPPTGINKTNIEVEKLLEKHEYNFRICAINKAGVGEHADVPG 16624


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 187   GDYYLCTETNFMNKVDIETLEKTEKVDWS-KFIAVNGATAHPHYDLDG 233
             G++ +CT    +NK +IE  +  EK +++ +  A+N A    H D+ G
Sbjct: 16510 GEWTMCTPPTGINKTNIEVEKLLEKHEYNFRICAINKAGVGEHADVPG 16557


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 187   GDYYLCTETNFMNKVDIETLEKTEKVDWS-KFIAVNGATAHPHYDLDG 233
             G++ +CT    +NK +IE  +  EK +++ +  A+N A    H D+ G
Sbjct: 16385 GEWTMCTPPTGINKTNIEVEKLLEKHEYNFRICAINKAGVGEHADVPG 16432


>gi|52630419 sterol regulatory element binding transcription factor
           1 isoform a [Homo sapiens]
          Length = 1177

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 513 YPSEPVFVPAPGTNEEDGGVILSVVITP 540
           YPS P F P PG  EE   V LS++ TP
Sbjct: 140 YPSMPAFSPGPGIKEE--SVPLSILQTP 165


>gi|22547195 sterol regulatory element binding transcription factor
           1 isoform b [Homo sapiens]
          Length = 1147

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 513 YPSEPVFVPAPGTNEEDGGVILSVVITP 540
           YPS P F P PG  EE   V LS++ TP
Sbjct: 110 YPSMPAFSPGPGIKEE--SVPLSILQTP 135


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,484,120
Number of Sequences: 37866
Number of extensions: 1080974
Number of successful extensions: 1750
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1723
Number of HSP's gapped (non-prelim): 24
length of query: 579
length of database: 18,247,518
effective HSP length: 108
effective length of query: 471
effective length of database: 14,157,990
effective search space: 6668413290
effective search space used: 6668413290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.