Guide to the Human Genome
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Name: SDHC Sequence: fasta or formatted (150aa) NCBI GI: 78711820
Description:

succinate dehydrogenase complex, subunit C isoform 2 precursor

Referenced in:

TCA Cycle

Other entries for this name:
alt prot [169aa] succinate dehydrogenase complex, subunit C isoform 1 precursor
alt prot [135aa] succinate dehydrogenase complex, subunit C isoform 3 precursor
alt prot [116aa] succinate dehydrogenase complex, subunit C isoform 4 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         11           2
 C cysteine            4.0          6           1
 D aspartate           1.3          2           1
 E glutamate           3.3          5           2
 F phenylalanine       4.0          6           1
 G glycine             8.0         12           2
 H histidine           6.7         10           2
 I isoleucine          5.3          8           1
 K lysine              4.0          6           2
 L leucine             9.3         14           3
 M methionine          2.7          4           1
 N asparagine          2.7          4           1
 P proline             8.7         13           1
 Q glutamine           1.3          2           1
 R arginine            6.0          9           1
 S serine             10.7         16           1
 T threonine           3.3          5           2
 V valine              5.3          8           2
 W tryptophan          2.7          4           1
 Y tyrosine            3.3          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   succinate dehydrogenase complex, subunit C isoform 2... 
LOC100128302          0.886   PREDICTED: similar to succinate dehydrogenase compl...
LOC100128302          0.886   PREDICTED: similar to succinate dehydrogenase compl...
SDHC                  0.488   succinate dehydrogenase complex, subunit C isoform 1 ...
SDHC                  0.197   succinate dehydrogenase complex, subunit C isoform 3...
LOC642502             0.197   hypothetical protein LOC642502 
SDHC                  0.080   succinate dehydrogenase complex, subunit C isoform 4...
KLB                   0.013   klotho beta 
KLF9                  0.010   Kruppel-like factor 9 
ENPP2                 0.010   autotaxin isoform 3 preproprotein 
ENPP2                 0.010   autotaxin isoform 2 preproprotein 
ENPP2                 0.010   autotaxin isoform 1 preproprotein 
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.010   Golgi-localized syntaphilin-related protein isoform...
LOC100128640          0.007   PREDICTED: hypothetical protein 
KDM6B                 0.007   lysine (K)-specific demethylase 6B 
SLC39A4               0.007   solute carrier family 39 (zinc transporter), member...
SLC39A4               0.007   solute carrier family 39 (zinc transporter), member...
KIAA0754              0.007   hypothetical protein LOC643314 
LOC100291393          0.007   PREDICTED: hypothetical protein XP_002347924 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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