Search of human proteins with 7706702

Search of human proteins with 7706702

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7706702 interleukin 23, alpha subunit p19 precursor [Homo
sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7706702 interleukin 23, alpha subunit p19 precursor [Homo sap...   392   e-109
gi|27437051 colony stimulating factor 3 isoform c [Homo sapiens]       30   0.95 
gi|27437049 colony stimulating factor 3 isoform b precursor [Hom...    30   0.95 
gi|4503079 colony stimulating factor 3 isoform a precursor [Homo...    30   1.2  
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ...    30   1.6  
gi|239787919 low density lipoprotein receptor-related protein 11...    29   2.1  
gi|73476319 hypothetical protein LOC352909 [Homo sapiens]              29   2.8  
gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]              28   3.6  
gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]            28   6.1  
gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]            28   6.1  
gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]            28   6.1  
gi|119220559 phosphoribosylaminoimidazole carboxylase, phosphori...    28   6.1  
gi|119220557 phosphoribosylaminoimidazole carboxylase, phosphori...    28   6.1  
gi|5453539 phosphoribosylaminoimidazole carboxylase, phosphoribo...    28   6.1  
gi|27363484 E74-like factor 1 (ets domain transcription factor) ...    27   8.0  
gi|154937380 hypothetical protein LOC642475 [Homo sapiens]             27   8.0  

>gi|7706702 interleukin 23, alpha subunit p19 precursor [Homo
           sapiens]
          Length = 189

 Score =  392 bits (1006), Expect = e-109
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MLGSRAVMLLLLLPWTAQGRAVPGGSSPAWTQCQQLSQKLCTLAWSAHPLVGHMDLREEG 60
           MLGSRAVMLLLLLPWTAQGRAVPGGSSPAWTQCQQLSQKLCTLAWSAHPLVGHMDLREEG
Sbjct: 1   MLGSRAVMLLLLLPWTAQGRAVPGGSSPAWTQCQQLSQKLCTLAWSAHPLVGHMDLREEG 60

Query: 61  DEETTNDVPHIQCGDGCDPQGLRDNSQFCLQRIHQGLIFYEKLLGSDIFTGEPSLLPDSP 120
           DEETTNDVPHIQCGDGCDPQGLRDNSQFCLQRIHQGLIFYEKLLGSDIFTGEPSLLPDSP
Sbjct: 61  DEETTNDVPHIQCGDGCDPQGLRDNSQFCLQRIHQGLIFYEKLLGSDIFTGEPSLLPDSP 120

Query: 121 VGQLHASLLGLSQLLQPEGHHWETQQIPSLSPSQPWQRLLLRFKILRSLQAFVAVAARVF 180
           VGQLHASLLGLSQLLQPEGHHWETQQIPSLSPSQPWQRLLLRFKILRSLQAFVAVAARVF
Sbjct: 121 VGQLHASLLGLSQLLQPEGHHWETQQIPSLSPSQPWQRLLLRFKILRSLQAFVAVAARVF 180

Query: 181 AHGAATLSP 189
           AHGAATLSP
Sbjct: 181 AHGAATLSP 189


>gi|27437051 colony stimulating factor 3 isoform c [Homo sapiens]
          Length = 200

 Score = 30.4 bits (67), Expect = 0.95
 Identities = 42/159 (26%), Positives = 61/159 (38%), Gaps = 31/159 (19%)

Query: 36  LSQKLCTLAWSAHP----LVGHMDLREEGDEETTNDVPHIQCGDGCDPQGLRDNSQFCLQ 91
           L +KLC      HP    L+GH           +  +P       C  Q L+     CL 
Sbjct: 57  LQEKLCATYKLCHPEELVLLGH-----------SLGIPWAPLSS-CPSQALQLAG--CLS 102

Query: 92  RIHQGLIFYEKLLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQQIPSLS 151
           ++H GL  Y+ LL + +    P L P     QL  +    +   Q E    E    P+L 
Sbjct: 103 QLHSGLFLYQGLLQA-LEGISPELGPTLDTLQLDVADFATTIWQQME----ELGMAPALQ 157

Query: 152 PSQ--------PWQRLLLRFKILRSLQAFVAVAARVFAH 182
           P+Q         +QR      +   LQ+F+ V+ RV  H
Sbjct: 158 PTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRH 196


>gi|27437049 colony stimulating factor 3 isoform b precursor [Homo
           sapiens]
          Length = 204

 Score = 30.4 bits (67), Expect = 0.95
 Identities = 42/159 (26%), Positives = 61/159 (38%), Gaps = 31/159 (19%)

Query: 36  LSQKLCTLAWSAHP----LVGHMDLREEGDEETTNDVPHIQCGDGCDPQGLRDNSQFCLQ 91
           L +KLC      HP    L+GH           +  +P       C  Q L+     CL 
Sbjct: 61  LQEKLCATYKLCHPEELVLLGH-----------SLGIPWAPLSS-CPSQALQLAG--CLS 106

Query: 92  RIHQGLIFYEKLLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQQIPSLS 151
           ++H GL  Y+ LL + +    P L P     QL  +    +   Q E    E    P+L 
Sbjct: 107 QLHSGLFLYQGLLQA-LEGISPELGPTLDTLQLDVADFATTIWQQME----ELGMAPALQ 161

Query: 152 PSQ--------PWQRLLLRFKILRSLQAFVAVAARVFAH 182
           P+Q         +QR      +   LQ+F+ V+ RV  H
Sbjct: 162 PTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRH 200


>gi|4503079 colony stimulating factor 3 isoform a precursor [Homo
           sapiens]
          Length = 207

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 13/102 (12%)

Query: 89  CLQRIHQGLIFYEKLLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQQIP 148
           CL ++H GL  Y+ LL + +    P L P     QL  +    +   Q E    E    P
Sbjct: 107 CLSQLHSGLFLYQGLLQA-LEGISPELGPTLDTLQLDVADFATTIWQQME----ELGMAP 161

Query: 149 SLSPSQ--------PWQRLLLRFKILRSLQAFVAVAARVFAH 182
           +L P+Q         +QR      +   LQ+F+ V+ RV  H
Sbjct: 162 ALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRH 203


>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
           sapiens]
          Length = 1281

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 102 KLLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQQIPSLSPSQPWQRLLL 161
           KL+ S+  +G  + L   P    H S +  S L     HH    QIPS  PS P Q  +L
Sbjct: 878 KLVYSNSSSGPTATLQKIP--NTHLSSVTTSDLSPGPCHHSSLSQIPSAIPSMPHQPTIL 935


>gi|239787919 low density lipoprotein receptor-related protein 11
           [Homo sapiens]
          Length = 500

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 110 TGEPSLLPDSPVGQLHASLLGLSQLLQ 136
           +G  +L P +P+ +LHA L G+ QLL+
Sbjct: 34  SGRAALPPAAPLSELHAQLSGVEQLLE 60


>gi|73476319 hypothetical protein LOC352909 [Homo sapiens]
          Length = 588

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 54  MDLREEGDEETTNDVPHIQCGDGCDPQ-GLRDN---SQFCLQRIHQGLIFYEKLLGSDIF 109
           +D+R+E  +     V  +    G  PQ G R +   ++FC  +        E  LG+ + 
Sbjct: 463 VDVRQEQLQGFNTRVRELAQAAGFAPQTGARPSETFARFCKSQ--------ESALGNTVP 514

Query: 110 TGEPSLLP----DSPVGQLHASLLGLSQLLQPEGHHWETQQIPSLSP 152
             EP   P      P+   + +L GL+Q LQ    H E  Q+PS SP
Sbjct: 515 AVEPGTPPLDILAQPLEASNPALEGLTQPLQGGTPHCEPCQLPSESP 561


>gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]
          Length = 1543

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 100  YEKLLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQQIPSLSPSQP 155
            ++ +LG D++  +      S    L  S L LSQ     G H +  ++P +SP  P
Sbjct: 1124 WDPMLGEDVWVPQERTAQTSGPNPLKLSSLMLSQ-----GQHLDVSRLPFISPKSP 1174


>gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)

Query: 22  VPGGSSPAWTQCQQLSQKLCTLAWSAH 48
           +P    P WTQC  +S +     WSAH
Sbjct: 189 IPASQQPLWTQCLPISWR----PWSAH 211


>gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)

Query: 22  VPGGSSPAWTQCQQLSQKLCTLAWSAH 48
           +P    P WTQC  +S +     WSAH
Sbjct: 189 IPASQQPLWTQCLPISWR----PWSAH 211


>gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)

Query: 22  VPGGSSPAWTQCQQLSQKLCTLAWSAH 48
           +P    P WTQC  +S +     WSAH
Sbjct: 189 IPASQQPLWTQCLPISWR----PWSAH 211


>gi|119220559 phosphoribosylaminoimidazole carboxylase,
           phosphoribosylaminoimidazole succinocarboxamide
           synthetase isoform 1 [Homo sapiens]
          Length = 432

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 113 PSLLPDSPVGQLHASL-----LGLSQLLQPEGHHWETQQIPSLSPSQPWQRL 159
           P L PD  V  + +SL     LG S +L PEG      QI  LS    W +L
Sbjct: 358 PPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKL 409


>gi|119220557 phosphoribosylaminoimidazole carboxylase,
           phosphoribosylaminoimidazole succinocarboxamide
           synthetase isoform 2 [Homo sapiens]
          Length = 425

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 113 PSLLPDSPVGQLHASL-----LGLSQLLQPEGHHWETQQIPSLSPSQPWQRL 159
           P L PD  V  + +SL     LG S +L PEG      QI  LS    W +L
Sbjct: 351 PPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKL 402


>gi|5453539 phosphoribosylaminoimidazole carboxylase,
           phosphoribosylaminoimidazole succinocarboxamide
           synthetase isoform 2 [Homo sapiens]
          Length = 425

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 113 PSLLPDSPVGQLHASL-----LGLSQLLQPEGHHWETQQIPSLSPSQPWQRL 159
           P L PD  V  + +SL     LG S +L PEG      QI  LS    W +L
Sbjct: 351 PPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKL 402


>gi|27363484 E74-like factor 1 (ets domain transcription factor)
           isoform a [Homo sapiens]
          Length = 619

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 51  VGHMDLREEGDEETTNDVPHIQCGDGCDPQGLRDNSQFCLQRIHQGLIFYEKLLGSDIFT 110
           V   ++ ++ D++ T  V    C DG +     + ++  L     G +  EK + ++IF+
Sbjct: 68  VAEEEIIDDDDDDITLTV-EASCHDGDETIETIEAAEALLNMDSPGPMLDEKRINNNIFS 126

Query: 111 GEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQQIP-SLSPSQP 155
                +  +PV  +  +L G+ ++++ +    +    P + SP QP
Sbjct: 127 SPEDDMVVAPVTHVSVTLDGIPEVMETQQVQEKYADSPGASSPEQP 172


>gi|154937380 hypothetical protein LOC642475 [Homo sapiens]
          Length = 719

 Score = 27.3 bits (59), Expect = 8.0
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 10/71 (14%)

Query: 100 YEKLLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPEGHHWETQ----------QIPS 149
           +E+ + +D+     + L ++      A++L LS  L+  G   E Q          Q+PS
Sbjct: 104 WEEGVLADLALYTAACLEEAGFAGTQATVLTLSSALEARGERLEDQVHALVRGLLAQVPS 163

Query: 150 LSPSQPWQRLL 160
           L+  +PW+  L
Sbjct: 164 LAEGRPWRAAL 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,294,561
Number of Sequences: 37866
Number of extensions: 417126
Number of successful extensions: 981
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 978
Number of HSP's gapped (non-prelim): 16
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.