Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL23A Sequence: fasta or formatted (189aa) NCBI GI: 7706702
Description:

interleukin 23, alpha subunit p19 precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         14           2
 C cysteine            2.6          5           1
 D aspartate           4.2          8           1
 E glutamate           4.2          8           2
 F phenylalanine       3.2          6           1
 G glycine             8.5         16           2
 H histidine           4.2          8           2
 I isoleucine          3.2          6           1
 K lysine              1.6          3           1
 L leucine            16.4         31           5
 M methionine          1.6          3           1
 N asparagine          1.1          2           1
 P proline             7.4         14           1
 Q glutamine           9.5         18           2
 R arginine            4.8          9           1
 S serine              8.5         16           2
 T threonine           4.2          8           2
 V valine              4.2          8           1
 W tryptophan          2.6          5           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 23, alpha subunit p19 precursor 
CSF3                  0.014   colony stimulating factor 3 isoform c 
CSF3                  0.014   colony stimulating factor 3 isoform b precursor [Hom...
CSF3                  0.014   colony stimulating factor 3 isoform a precursor [Homo...
TTLL5                 0.014   tubulin tyrosine ligase-like family, member 5 
LRP11                 0.011   low density lipoprotein receptor-related protein 11...
C19orf51              0.011   hypothetical protein LOC352909 
TULP4                 0.008   tubby like protein 4 isoform 1 
LOC100133161          0.008   PREDICTED: hypothetical protein 
LOC100132062          0.008   PREDICTED: hypothetical protein 
LOC100132287          0.008   PREDICTED: hypothetical protein 
PAICS                 0.008   phosphoribosylaminoimidazole carboxylase, phosphori...
PAICS                 0.008   phosphoribosylaminoimidazole carboxylase, phosphori...
PAICS                 0.008   phosphoribosylaminoimidazole carboxylase, phosphoribo...
ELF1                  0.005   E74-like factor 1 (ets domain transcription factor) ...
C8orf73               0.005   hypothetical protein LOC642475 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press