Guide to the Human Genome
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Name: PAICS Sequence: fasta or formatted (425aa) NCBI GI: 5453539
Description:

phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase isoform 2

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt mRNA [425aa] phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimid...
alt prot [432aa] phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimid...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         31           2
 C cysteine            3.1         13           1
 D aspartate           4.7         20           2
 E glutamate           7.3         31           2
 F phenylalanine       3.8         16           2
 G glycine             7.3         31           1
 H histidine           1.2          5           1
 I isoleucine          6.4         27           1
 K lysine              8.2         35           2
 L leucine             9.4         40           3
 M methionine          1.6          7           1
 N asparagine          3.8         16           2
 P proline             4.7         20           2
 Q glutamine           4.5         19           2
 R arginine            3.8         16           2
 S serine              7.1         30           2
 T threonine           5.2         22           2
 V valine              6.8         29           3
 W tryptophan          2.4         10           1
 Y tyrosine            1.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoribosylaminoimidazole carboxylase, phosphoribo... 
PAICS                 1.000   phosphoribosylaminoimidazole carboxylase, phosphori...
PAICS                 0.988   phosphoribosylaminoimidazole carboxylase, phosphori...
KIAA1009              0.008   KIAA1009 protein 
DNAJC25               0.008   DnaJ (Hsp40) homolog, subfamily C , member 25 [Homo...
UBR1                  0.007   ubiquitin protein ligase E3 component n-recognin 1 [...
STAB2                 0.006   stabilin 2 precursor 
ACSL5                 0.006   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.006   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.006   acyl-CoA synthetase long-chain family member 5 isofo...
ISM2                  0.005   isthmin 2 homolog isoform 3 
SCPEP1                0.005   serine carboxypeptidase 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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