C9orf78 36187

Name: C9orf78	Sequence: fasta or formatted (289aa)		NCBI GI: 7706557
Description: chromosome 9 open reading frame 78		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 15 1 C cysteine 0.3 1 1 D aspartate 6.6 19 2 E glutamate 14.2 41 3 F phenylalanine 2.1 6 1 G glycine 3.8 11 2 H histidine 1.7 5 1 I isoleucine 3.8 11 2 K lysine 11.4 33 3 L leucine 6.6 19 2 M methionine 3.5 10 2 N asparagine 5.5 16 1 P proline 5.2 15 2 Q glutamine 3.1 9 2 R arginine 8.7 25 4 S serine 5.2 15 2 T threonine 4.5 13 2 V valine 6.2 18 2 W tryptophan 0.0 0 0 Y tyrosine 2.4 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromosome 9 open reading frame 78 SDCCAG1 0.029 serologically defined colon cancer antigen 1 LRRCC1 0.029 sodium channel associated protein 2 isoform b [Homo... LRRCC1 0.029 sodium channel associated protein 2 isoform a [Homo... CALD1 0.025 caldesmon 1 isoform 1 TCHH 0.025 trichohyalin PLEC1 0.022 plectin 1 isoform 11 PLEC1 0.022 plectin 1 isoform 10 PLEC1 0.022 plectin 1 isoform 8 PLEC1 0.022 plectin 1 isoform 7 PLEC1 0.022 plectin 1 isoform 6 PLEC1 0.022 plectin 1 isoform 3 PLEC1 0.022 plectin 1 isoform 2 PLEC1 0.022 plectin 1 isoform 1 PPL 0.022 periplakin WDR87 0.020 NYD-SP11 protein LOC100286959 0.020 PREDICTED: hypothetical protein XP_002343921 ATRX 0.020 transcriptional regulator ATRX isoform 2 ATRX 0.020 transcriptional regulator ATRX isoform 1 WDR60 0.020 WD repeat domain 60 TNNT3 0.020 troponin T3, skeletal, fast isoform 1 SFRS12 0.020 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.020 splicing factor, arginine/serine-rich 12 isoform b [... TNNT3 0.018 troponin T3, skeletal, fast isoform 3 TNNT3 0.018 troponin T3, skeletal, fast isoform 4 DEK 0.018 DEK oncogene isoform 1 GOLGB1 0.018 golgi autoantigen, golgin subfamily b, macrogolgin ... IBSP 0.018 integrin-binding sialoprotein precursor ANKRD12 0.018 ankyrin repeat domain 12 isoform 2 ANKRD12 0.018 ankyrin repeat domain 12 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.