Guide to the Human Genome
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Name: PTRH2 Sequence: fasta or formatted (179aa) NCBI GI: 7706351
Description:

Bcl-2 inhibitor of transcription

Referenced in:

Mitochondria
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         16           2
 C cysteine            2.8          5           1
 D aspartate           3.9          7           1
 E glutamate           4.5          8           2
 F phenylalanine       0.6          1           1
 G glycine             9.5         17           1
 H histidine           2.8          5           1
 I isoleucine          4.5          8           1
 K lysine              8.4         15           1
 L leucine            11.7         21           2
 M methionine          4.5          8           1
 N asparagine          1.1          2           1
 P proline             5.0          9           1
 Q glutamine           4.5          8           1
 R arginine            2.8          5           2
 S serine              7.3         13           1
 T threonine           5.6         10           1
 V valine              7.8         14           3
 W tryptophan          1.1          2           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Bcl-2 inhibitor of transcription 
NLRP10                0.030   NLR family, pyrin domain containing 10 
C2orf79               0.021   hypothetical protein LOC391356 
LOC100291658          0.012   PREDICTED: hypothetical protein XP_002344999 
LOC100287628          0.012   PREDICTED: hypothetical protein 
LOC100287628          0.012   PREDICTED: hypothetical protein XP_002343489 
MAP1A                 0.009   microtubule-associated protein 1A 
ZAP70                 0.009   zeta-chain associated protein kinase 70kDa isoform 1...
ADAD1                 0.009   adenosine deaminase domain containing 1 (testis-spe...
PHLDB1                0.006   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.006   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.006   pleckstrin homology-like domain, family B, member 1 ...
ZFAT                  0.006   zinc finger protein 406 isoform ZFAT-1 
ZFAT                  0.006   zinc finger protein 406 isoform TR-ZFAT 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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