Guide to the Human Genome
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Name: GOLT1B Sequence: fasta or formatted (138aa) NCBI GI: 7705636
Description:

golgi transport 1 homolog B

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          5           1
 C cysteine            0.0          0           0
 D aspartate           2.2          3           1
 E glutamate           2.2          3           1
 F phenylalanine      17.4         24           3
 G glycine            13.8         19           2
 H histidine           0.7          1           1
 I isoleucine          8.0         11           1
 K lysine              4.3          6           1
 L leucine            13.0         18           2
 M methionine          4.3          6           1
 N asparagine          2.9          4           2
 P proline             2.9          4           1
 Q glutamine           1.4          2           1
 R arginine            4.3          6           2
 S serine              2.9          4           1
 T threonine           3.6          5           1
 V valine             10.9         15           3
 W tryptophan          0.7          1           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi transport 1 homolog B 
GOLT1A                0.546   golgi transport 1 homolog A 
TMEM218               0.020   transmembrane protein 218 
CBLN1                 0.016   cerebellin 1 precursor 
GPR115                0.012   G-protein coupled receptor 115 
SLC17A7               0.008   solute carrier family 17, member 7 
MFN2                  0.008   mitofusin 2 
MFN2                  0.008   mitofusin 2 
PLLP                  0.008   plasmolipin 
YIF1B                 0.008   Yip1 interacting factor homolog B isoform 7 
CD53                  0.008   CD53 antigen 
CD53                  0.008   CD53 antigen 
SLC39A12              0.004   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.004   solute carrier family 39 (zinc transporter), member...
KCNA3                 0.004   potassium voltage-gated channel, shaker-related subf...
KCNA1                 0.004   potassium voltage-gated channel subfamily A member ...
SLC5A4                0.004   solute carrier family 5 (low affinity glucose cotran...
KCNA2                 0.004   potassium voltage-gated channel, shaker-related subfa...
KCNA10                0.004   potassium voltage-gated channel, shaker-related subfa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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