Guide to the Human Genome
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Name: TMEM218 Sequence: fasta or formatted (115aa) NCBI GI: 122937384
Description:

transmembrane protein 218

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         13           2
 C cysteine            0.9          1           1
 D aspartate           1.7          2           2
 E glutamate           3.5          4           1
 F phenylalanine      10.4         12           2
 G glycine             8.7         10           2
 H histidine           1.7          2           1
 I isoleucine          7.8          9           2
 K lysine              1.7          2           1
 L leucine            19.1         22           3
 M methionine          0.9          1           1
 N asparagine          0.0          0           0
 P proline             4.3          5           1
 Q glutamine           0.0          0           0
 R arginine            3.5          4           1
 S serine              5.2          6           1
 T threonine           1.7          2           1
 V valine             13.0         15           1
 W tryptophan          0.9          1           1
 Y tyrosine            3.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 218 
AIG1                  0.025   androgen-induced 1 
GOLT1B                0.025   golgi transport 1 homolog B 
CYTB                  0.010   cytochrome b 
LOC100292310          0.010   PREDICTED: hypothetical protein 
LOC100290746          0.010   PREDICTED: hypothetical protein XP_002348214 
LOC100289482          0.010   PREDICTED: hypothetical protein XP_002343873 
ADCY6                 0.010   adenylate cyclase 6 isoform b 
SLC44A4               0.010   choline transporter-like protein 4 
CYTB                  0.010   cytochrome b 
SLC1A2                0.010   excitatory amino acid transporter 2 
CPA1                  0.005   carboxypeptidase A1 precursor 
SLC39A7               0.005   solute carrier family 39, member 7 
SLC39A7               0.005   solute carrier family 39, member 7 
NIPA2                 0.005   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.005   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.005   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.005   non imprinted in Prader-Willi/Angelman syndrome 2 is...
ADCY6                 0.005   adenylate cyclase 6 isoform a 
OR6K6                 0.005   olfactory receptor, family 6, subfamily K, member 6 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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