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Search of human proteins with 7662655
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662655 SBBI31 protein [Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662655 SBBI31 protein [Homo sapiens] 347 3e-96
gi|71772838 sorting nexin 22 [Homo sapiens] 159 1e-39
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 53 1e-07
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 53 1e-07
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 53 1e-07
gi|66472382 nischarin [Homo sapiens] 45 2e-05
gi|33504571 sorting nexin 20 isoform 1 [Homo sapiens] 45 4e-05
gi|154091028 sorting nexin 29 [Homo sapiens] 43 1e-04
gi|31742501 sorting nexin family member 27 [Homo sapiens] 42 2e-04
gi|7661890 sorting nexin 17 [Homo sapiens] 42 3e-04
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 39 0.002
gi|23111023 sorting nexin 10 [Homo sapiens] 38 0.004
gi|23111026 sorting nexin 11 [Homo sapiens] 38 0.004
gi|23111028 sorting nexin 11 [Homo sapiens] 38 0.004
gi|222537716 sorting nexin 31 [Homo sapiens] 37 0.008
gi|47519798 neutrophil cytosolic factor 4 isoform 1 [Homo sapiens] 37 0.008
gi|163644267 neutrophil cytosolic factor 4 isoform 2 [Homo sapiens] 37 0.008
gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... 36 0.014
gi|23111030 sorting nexin 12 [Homo sapiens] 36 0.018
gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1 i... 35 0.031
gi|157671929 phosphoinositide-3-kinase, class 2 alpha polypeptid... 35 0.040
gi|4507143 sorting nexin 3 isoform a [Homo sapiens] 34 0.052
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 34 0.052
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 34 0.068
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 34 0.068
gi|38708169 sorting nexin 25 [Homo sapiens] 33 0.089
gi|194097347 phosphoinositide-3-kinase, class 2 beta polypeptide... 33 0.12
gi|15553099 sorting nexin 21 isoform a [Homo sapiens] 32 0.34
gi|46370089 sorting nexin 15 isoform B [Homo sapiens] 31 0.44
gi|22547191 sorting nexin 15 isoform A [Homo sapiens] 31 0.44
>gi|7662655 SBBI31 protein [Homo sapiens]
Length = 169
Score = 347 bits (890), Expect = 3e-96
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MEVYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEIPS 60
MEVYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEIPS
Sbjct: 1 MEVYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEIPS 60
Query: 61 KHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDET 120
KHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDET
Sbjct: 61 KHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDET 120
Query: 121 ESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEGVLHGIFYPHLQPR 169
ESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEGVLHGIFYPHLQPR
Sbjct: 121 ESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEGVLHGIFYPHLQPR 169
>gi|71772838 sorting nexin 22 [Homo sapiens]
Length = 193
Score = 159 bits (402), Expect = 1e-39
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 6/174 (3%)
Query: 1 MEVYIPSFRYE----ESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTP 56
+EV+IPS E E+ + VF++EVL +GR+H V +RYSEFHALHK++KK K P
Sbjct: 2 LEVHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKLYKVP 61
Query: 57 EIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGS 116
+ PSK + NW + LEQRRQGLE Y+Q ++ N+E+PK L+FL +RH P+ PKA + G+
Sbjct: 62 DFPSKRLPNWRTRGLEQRRQGLEAYIQGILYLNQEVPKELLEFLRLRHFPTDPKASNWGT 121
Query: 117 FDETESEESSKLSHQ-PVLLFLRDPYVL-PAASDFPNVVIEGVLHGIFYPHLQP 168
E +SS HQ PVL F DPYV P+ PNVV+ GVL G++ + P
Sbjct: 122 LREFLPGDSSSQQHQRPVLSFHVDPYVCNPSPESLPNVVVNGVLQGLYSFSISP 175
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 52.8 bits (125), Expect = 1e-07
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 3 VYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTP--EIPS 60
V IPS E + ++ +TV+K+ V + + FV +RY+EF L+ LKK +IP+
Sbjct: 16 VSIPSSD-EHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAMALKIPA 74
Query: 61 KHV--RNWVPKVLEQRRQGLETYLQAVI----LENEELPKLFLDFLNVRHLPSLPKAESC 114
K + N+ P ++QRR GL ++Q ++ L N + FL + +H +++
Sbjct: 75 KRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKH-----QSDPS 129
Query: 115 GSFDETESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEG 156
DE S++ S L +P+ P DF V+ +G
Sbjct: 130 EDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKG 171
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 52.8 bits (125), Expect = 1e-07
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 3 VYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTP--EIPS 60
V IPS E + ++ +TV+K+ V + + FV +RY+EF L+ LKK +IP+
Sbjct: 16 VSIPSSD-EHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAMALKIPA 74
Query: 61 KHV--RNWVPKVLEQRRQGLETYLQAVI----LENEELPKLFLDFLNVRHLPSLPKAESC 114
K + N+ P ++QRR GL ++Q ++ L N + FL + +H +++
Sbjct: 75 KRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKH-----QSDPS 129
Query: 115 GSFDETESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEG 156
DE S++ S L +P+ P DF V+ +G
Sbjct: 130 EDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKG 171
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 52.8 bits (125), Expect = 1e-07
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 3 VYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTP--EIPS 60
V IPS E + ++ +TV+K+ V + + FV +RY+EF L+ LKK +IP+
Sbjct: 16 VSIPSSD-EHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAMALKIPA 74
Query: 61 KHV--RNWVPKVLEQRRQGLETYLQAVI----LENEELPKLFLDFLNVRHLPSLPKAESC 114
K + N+ P ++QRR GL ++Q ++ L N + FL + +H +++
Sbjct: 75 KRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKH-----QSDPS 129
Query: 115 GSFDETESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEG 156
DE S++ S L +P+ P DF V+ +G
Sbjct: 130 EDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKG 171
>gi|66472382 nischarin [Homo sapiens]
Length = 1504
Score = 45.4 bits (106), Expect = 2e-05
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 13 SDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKL---KKCIKTPEIPSKHVRNWVPK 69
S+L YTV+ I+V + V+ RYS+FH LH+KL +K K P K +
Sbjct: 24 SELVDTYTVYIIQVTDGSHEWTVKHRYSDFHDLHEKLVAERKIDKNLLPPKKIIGKNSRS 83
Query: 70 VLEQRRQGLETYLQAVI 86
++E+R + LE YLQ ++
Sbjct: 84 LVEKREKDLEVYLQKLL 100
>gi|33504571 sorting nexin 20 isoform 1 [Homo sapiens]
Length = 316
Score = 44.7 bits (104), Expect = 4e-05
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 5 IPSFRYEESDLERGYTVFKIEVLMNG----RKHFVEKRYSEFHALHKKLKKC----IKTP 56
I S R EE + + + V++I V+ G K +E+RYS+F L K L K I+
Sbjct: 80 IASARIEERKVSK-FVVYQIIVIQTGSFDNNKAVLERRYSDFAKLQKALLKTFREEIEDV 138
Query: 57 EIPSKHVR-NWVPKVLEQRRQGLETYLQAV-ILENEELPKLFLDFLNVRHLPSLPKAESC 114
E P KH+ N+ +++ +RR+ L+ YL + + + FLDFL P L +A C
Sbjct: 139 EFPRKHLTGNFAEEMICERRRALQEYLGLLYAIRCVRRSREFLDFLT---RPELREAFGC 195
>gi|154091028 sorting nexin 29 [Homo sapiens]
Length = 428
Score = 43.1 bits (100), Expect = 1e-04
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 1 MEVYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEI-- 58
+ V+IPS + + V+++ + + + + +RY+EF +LH KL+ K P++
Sbjct: 273 INVWIPSV-FLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQN--KYPQVRA 329
Query: 59 ----PSKHVRNWVPKVLEQRRQGLETYLQAVI 86
P K + N K +E+RR+ L+ YL++V+
Sbjct: 330 YNFPPKKAIGNKDAKFVEERRKQLQNYLRSVM 361
>gi|31742501 sorting nexin family member 27 [Homo sapiens]
Length = 528
Score = 42.4 bits (98), Expect = 2e-04
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 3 VYIPSFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKT---PEIP 59
+ +P +++ E + E+ + V+ V M GR+ KRY EF LH+ LK+ P +P
Sbjct: 165 ISVPRYKHVEQNGEK-FVVYN--VYMAGRQ-LCSKRYREFAILHQNLKREFANFTFPRLP 220
Query: 60 SKHVRNWVPKVLEQRRQGLETYLQAV 85
K + + L+ RR+GLE YL+ V
Sbjct: 221 GKWPFSLSEQQLDARRRGLEEYLEKV 246
>gi|7661890 sorting nexin 17 [Homo sapiens]
Length = 470
Score = 41.6 bits (96), Expect = 3e-04
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 19 YTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKK---CIKTPEIPSKHVRNWVPKVLEQRR 75
Y + I V NG H RYS+ LH++L+K P P K + + P +EQRR
Sbjct: 20 YVAYNIHV--NGVLH-CRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRR 76
Query: 76 QGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDETESEESSKLSHQPVLL 135
+ LE Y+QA VR P L +E+ SF +E+ ++ + V L
Sbjct: 77 EQLEKYMQA-----------------VRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSL 119
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 35 VEKRYSEFHALHKKLKKC-IKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAV----ILEN 89
+ +RYS+F L+ L+ + P P K + N + + +R++GL+ YL + IL N
Sbjct: 52 IVRRYSDFDLLNNSLQIAGLSLPLPPKKLIGNMDREFIAERQKGLQNYLNVITTNHILSN 111
Query: 90 EELPKLFLD 98
EL K FLD
Sbjct: 112 CELVKKFLD 120
>gi|23111023 sorting nexin 10 [Homo sapiens]
Length = 201
Score = 38.1 bits (87), Expect = 0.004
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 1 MEVYIPSFRYEESDLERGYTVFKIEVLMNG-----RKHFVEKRYSEFHALHKKLKK---C 52
+ V++ R ++ D Y ++I + N + V +RY EF L ++L+
Sbjct: 11 VSVWVRDPRIQKEDFWHSYIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALL 70
Query: 53 IKTPEIPSKHVRNWVP--KVLEQRRQGLETYLQ-----AVILENEELPKLFLDFLNVRHL 105
++ PE+PSK++ + + ++QRRQGLE +L+ A++L + L LN +
Sbjct: 71 VQLPELPSKNLFFNMNNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDI 130
Query: 106 PSLPKAESCGSFDE 119
+ ++ S +E
Sbjct: 131 EACVSGQTKYSVEE 144
>gi|23111026 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 38.1 bits (87), Expect = 0.004
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 35 VEKRYSEFHALHKKLKK---CIKTPEIPSKHVR-NWVPKVLEQRRQG----LETYLQAVI 86
V +RY EF L K+L++ + PE+P K + +E+RRQG LE LQ+V+
Sbjct: 56 VRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVV 115
Query: 87 LENEELPKLFLDFLNVRHLPSLPKAESC 114
L ++ LFL + S+P+ E+C
Sbjct: 116 LLSDSQLHLFL-----QSQLSVPEIEAC 138
>gi|23111028 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 38.1 bits (87), Expect = 0.004
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 35 VEKRYSEFHALHKKLKK---CIKTPEIPSKHVR-NWVPKVLEQRRQG----LETYLQAVI 86
V +RY EF L K+L++ + PE+P K + +E+RRQG LE LQ+V+
Sbjct: 56 VRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVV 115
Query: 87 LENEELPKLFLDFLNVRHLPSLPKAESC 114
L ++ LFL + S+P+ E+C
Sbjct: 116 LLSDSQLHLFL-----QSQLSVPEIEAC 138
>gi|222537716 sorting nexin 31 [Homo sapiens]
Length = 440
Score = 37.0 bits (84), Expect = 0.008
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 34 FVEKRYSEFHALHKKLKKCIKT--PEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEE 91
F RYS+ H +++L++ P P K+ + ++RR LE YLQ V ++
Sbjct: 33 FCRVRYSQLHGWNEQLRRVFGNCLPPFPPKYYLAMTTAMADERRDQLEQYLQNVTMDPNV 92
Query: 92 L-PKLFLDFLNVRHL 105
L +F++FL + L
Sbjct: 93 LRSDVFVEFLKLAQL 107
>gi|47519798 neutrophil cytosolic factor 4 isoform 1 [Homo sapiens]
Length = 339
Score = 37.0 bits (84), Expect = 0.008
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 16 ERGYT---VFKIEV-LMNGRKHFVEKRYSEFHALHKKLKK-----------CIKTPEIPS 60
+RG+T VF IEV G K+ + +RY +FHAL KL++ P +P+
Sbjct: 32 KRGFTSHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEERFGPDSKSSALACTLPTLPA 91
Query: 61 KHVRNWVPKVLEQRRQGLETYLQAVI 86
K ++ E R L Y+++++
Sbjct: 92 KVYVGVKQEIAEMRIPALNAYMKSLL 117
>gi|163644267 neutrophil cytosolic factor 4 isoform 2 [Homo sapiens]
Length = 348
Score = 37.0 bits (84), Expect = 0.008
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 16 ERGYT---VFKIEV-LMNGRKHFVEKRYSEFHALHKKLKK-----------CIKTPEIPS 60
+RG+T VF IEV G K+ + +RY +FHAL KL++ P +P+
Sbjct: 32 KRGFTSHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEERFGPDSKSSALACTLPTLPA 91
Query: 61 KHVRNWVPKVLEQRRQGLETYLQAVI 86
K ++ E R L Y+++++
Sbjct: 92 KVYVGVKQEIAEMRIPALNAYMKSLL 117
>gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform a [Homo sapiens]
Length = 1066
Score = 36.2 bits (82), Expect = 0.014
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 16/83 (19%)
Query: 17 RGYTVFKIEVLMNGRKH-------FVEKRYSEFHALHKKL----KKCIKTPEIPSKHVRN 65
RGYTV+K+ + R++ V KRYS+F LHK+L K + E+ +
Sbjct: 25 RGYTVYKVTARVVSRRNPEDVQEIIVWKRYSDFKKLHKELWQIHKNLFRHSELFPPFAKG 84
Query: 66 WV-----PKVLEQRRQGLETYLQ 83
V V+E+RRQ E LQ
Sbjct: 85 IVFGRFDETVIEERRQCAEDLLQ 107
>gi|23111030 sorting nexin 12 [Homo sapiens]
Length = 162
Score = 35.8 bits (81), Expect = 0.018
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 35 VEKRYSEFHALHKKLKKCIK--TPEIPSKHVRNWVP----------KVLEQRRQGLETYL 82
V +RYS+F L +L++ K P +P K ++ +P +E+RRQGLE ++
Sbjct: 68 VRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFI 127
Query: 83 QAV----ILENEELPKLFL 97
+ + +NE +FL
Sbjct: 128 NKIAGHPLAQNERCLHMFL 146
>gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform b [Homo sapiens]
Length = 1054
Score = 35.0 bits (79), Expect = 0.031
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 17 RGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKL----KKCIKTPEIPSKHVRNWV----- 67
RGYTV+K+ + V KRYS+F LHK+L K + E+ + V
Sbjct: 25 RGYTVYKVTARI-----IVWKRYSDFKKLHKELWQIHKNLFRHSELFPPFAKGIVFGRFD 79
Query: 68 PKVLEQRRQGLETYLQ 83
V+E+RRQ E LQ
Sbjct: 80 ETVIEERRQCAEDLLQ 95
>gi|157671929 phosphoinositide-3-kinase, class 2 alpha polypeptide
[Homo sapiens]
Length = 1686
Score = 34.7 bits (78), Expect = 0.040
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 8 FRYEESDLERGYTVFKIEVLMNGR--KHFVEKRYSEFHALHKKLKKCI---KTPEIPSKH 62
F Y + + ++ + +L G+ FV + + EF LH KL K P P++
Sbjct: 1430 FTYHKKYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSIIFPLWKLPGFPNRM 1489
Query: 63 V--RNWVPKVLEQRRQGLETYLQAV------ILENEELPKLFLDFLNVRHLPSLPKAESC 114
V R + V +R+ L +YLQ++ + E + + F L + ++
Sbjct: 1490 VLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHPLLRDEKAEGIARSADA 1549
Query: 115 GSFDETESE 123
GSF T +
Sbjct: 1550 GSFSPTPGQ 1558
>gi|4507143 sorting nexin 3 isoform a [Homo sapiens]
Length = 162
Score = 34.3 bits (77), Expect = 0.052
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 19 YTVFKIEVLMNG-----RKHFVEKRYSEFHALHKKLKKCIKT--PEIPSKHVRNWVP--- 68
+T ++I V N ++ V +RYS+F L +L++ K P +P K +P
Sbjct: 46 FTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFRG 105
Query: 69 -------KVLEQRRQGLETYLQAV----ILENEELPKLFL--DFLNVRHLPS 107
+E+R+QGLE ++ V + +NE +FL + ++ + PS
Sbjct: 106 DDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPS 157
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 34.3 bits (77), Expect = 0.052
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 22 FKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEI------PSKHVRNWVPKVLEQRR 75
F++++ + V +RYS F +HK LK +K E+ P K N +V+ +RR
Sbjct: 1204 FEVKITVLDETWTVFRRYSRFREMHKTLK--LKYAELAALEFPPKKLFGNKDERVIAERR 1261
Query: 76 QGLETYLQ---AVILENEELP 93
LE YL+ +V+L++ P
Sbjct: 1262 SHLEKYLRDFFSVMLQSATSP 1282
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.068
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 10 YEESDLERGYTVFKIEVLMNGRKHFVE-KRYSEFHALHKKLKKCIKTPEIPSKHVR---- 64
YE + +TV+KI V + +V +RY++F L+ KLK+ + R
Sbjct: 115 YEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKD 174
Query: 65 NWVPKVLEQRRQGLETYLQAVILENEELPKLFL-DFLNVRHLPS-LPKAESCGSFDETES 122
N+ LE R+ GL+ +LQ ++ + L + +FL + P E +F ET
Sbjct: 175 NYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLE 234
Query: 123 EESSKLSHQ 131
E + +L +
Sbjct: 235 ETNYRLQKE 243
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.068
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 10 YEESDLERGYTVFKIEVLMNGRKHFVE-KRYSEFHALHKKLKKCIKTPEIPSKHVR---- 64
YE + +TV+KI V + +V +RY++F L+ KLK+ + R
Sbjct: 115 YEVMEERAKFTVYKILVKKTPEESWVVFRRYTDFSRLNDKLKEMFPGFRLALPPKRWFKD 174
Query: 65 NWVPKVLEQRRQGLETYLQAVILENEELPKLFL-DFLNVRHLPS-LPKAESCGSFDETES 122
N+ LE R+ GL+ +LQ ++ + L + +FL + P E +F ET
Sbjct: 175 NYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGPFDSLEESRAFCETLE 234
Query: 123 EESSKLSHQ 131
E + +L +
Sbjct: 235 ETNYRLQKE 243
>gi|38708169 sorting nexin 25 [Homo sapiens]
Length = 840
Score = 33.5 bits (75), Expect = 0.089
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 35 VEKRYSEFHALHKKLKKC------IKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVI-- 86
V +R SEF LH+KL +C ++ P + ++ K +E+ + L +LQ ++
Sbjct: 549 VPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQLNKFLQNLLSD 608
Query: 87 --LENEELPKLFL----DFLNVRHLPSLPKAESCGSF-----------DETESEESSKLS 129
L E FL D+L V + + S SF E E+EE S LS
Sbjct: 609 ERLCQSEALYAFLSPSPDYLKVIDVQGKKNSFSLSSFLERLPRDFFSHQEEETEEDSDLS 668
>gi|194097347 phosphoinositide-3-kinase, class 2 beta polypeptide
[Homo sapiens]
Length = 1634
Score = 33.1 bits (74), Expect = 0.12
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 17 RGYTVFKIEVLMNGRKH--FVEKRYSEFHALHKKLKKCIKT---PEIPSKHV--RNWVPK 69
+GY ++ ++V+ ++++ + EF LH KL+ + P PS+ V R+
Sbjct: 1383 KGY-IYVVKVMRENTHEATYIQRTFEEFQELHNKLRLLFPSSHLPSFPSRFVIGRSRGEA 1441
Query: 70 VLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKA 111
V E+RR+ L Y+ +I E+ + L + LP KA
Sbjct: 1442 VAERRREELNGYIWHLIHAPPEVAECDLVYTFFHPLPRDEKA 1483
>gi|15553099 sorting nexin 21 isoform a [Homo sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 0.34
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 35 VEKRYSEFHALHKKLKKCIKTP----EIPSKHV-RNWVPKVLEQRRQGLETYL--QAVIL 87
+ +RYS+F LH+ L++ + P P K + RN+ + + +R + E +L +
Sbjct: 168 ISRRYSDFERLHRNLQRQFRGPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVP 227
Query: 88 ENEELPKLFLDFLNVRHLPSLPKAES 113
E P L F+ LP L +A+S
Sbjct: 228 ELRHAPDLQDFFV----LPELRRAQS 249
>gi|46370089 sorting nexin 15 isoform B [Homo sapiens]
Length = 256
Score = 31.2 bits (69), Expect = 0.44
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 17 RGYTVFKIEVLMNGRKH-------FVEKRYSEFHALHKKL--------KKCIKTPEIPSK 61
+GYT +K+ +K V KRYS+F LH L ++ + P P
Sbjct: 23 KGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPAFPRA 82
Query: 62 HV-RNWVPKVLEQRRQGLETYLQAVI 86
V + V+E+RR+G E L+ +
Sbjct: 83 QVFGRFEASVIEERRKGAEDLLRFTV 108
>gi|22547191 sorting nexin 15 isoform A [Homo sapiens]
Length = 342
Score = 31.2 bits (69), Expect = 0.44
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 17 RGYTVFKIEVLMNGRKH-------FVEKRYSEFHALHKKL--------KKCIKTPEIPSK 61
+GYT +K+ +K V KRYS+F LH L ++ + P P
Sbjct: 23 KGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPAFPRA 82
Query: 62 HV-RNWVPKVLEQRRQGLETYLQAVI 86
V + V+E+RR+G E L+ +
Sbjct: 83 QVFGRFEASVIEERRKGAEDLLRFTV 108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.139 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,939,516
Number of Sequences: 37866
Number of extensions: 307237
Number of successful extensions: 860
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 57
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.