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Search of human proteins with 7662354
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662354 MON1 homolog B [Homo sapiens]
(547 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662354 MON1 homolog B [Homo sapiens] 1090 0.0
gi|215820630 MON1 homolog A isoform a [Homo sapiens] 409 e-114
gi|215820632 MON1 homolog A isoform b [Homo sapiens] 320 2e-87
gi|14149746 nuclear receptor subfamily 2, group F, member 2 isof... 43 8e-04
gi|70980547 FYVE-finger-containing Rab5 effector protein rabenos... 43 8e-04
gi|28144916 lin-37 homolog [Homo sapiens] 40 0.004
gi|47519490 reticulon 4 isoform D [Homo sapiens] 40 0.007
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 39 0.009
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 39 0.009
gi|33286446 opioid growth factor receptor [Homo sapiens] 39 0.012
gi|24431935 reticulon 4 isoform A [Homo sapiens] 39 0.012
gi|4758410 fragile X mental retardation syndrome related protein... 39 0.012
gi|31563386 sulfotransferase family, cytosolic, 2B, member 1 iso... 39 0.016
gi|31563388 sulfotransferase family, cytosolic, 2B, member 1 iso... 39 0.016
gi|189181750 human immunodeficiency virus type I enhancer bindin... 38 0.027
gi|116089331 human immunodeficiency virus type I enhancer bindin... 38 0.027
gi|24431933 reticulon 4 isoform B [Homo sapiens] 37 0.061
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.061
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 36 0.079
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 36 0.079
gi|23510333 pygopus homolog 2 [Homo sapiens] 36 0.079
gi|27734799 REST corepressor 2 [Homo sapiens] 36 0.079
gi|38176300 nestin [Homo sapiens] 36 0.10
gi|194097341 period 1 [Homo sapiens] 36 0.10
gi|19923391 homeobox D3 [Homo sapiens] 36 0.10
gi|66932999 testis-specific protein kinase 1 [Homo sapiens] 36 0.10
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 36 0.10
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 35 0.14
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14
gi|190358526 hypothetical protein LOC54785 [Homo sapiens] 35 0.14
>gi|7662354 MON1 homolog B [Homo sapiens]
Length = 547
Score = 1090 bits (2818), Expect = 0.0
Identities = 547/547 (100%), Positives = 547/547 (100%)
Query: 1 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP 60
MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
Sbjct: 1 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP 60
Query: 61 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK 120
SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
Sbjct: 61 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK 120
Query: 121 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS 180
PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
Sbjct: 121 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS 180
Query: 181 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP 240
QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
Sbjct: 181 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP 240
Query: 241 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD 300
GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
Sbjct: 241 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD 300
Query: 301 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF 360
PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
Sbjct: 301 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF 360
Query: 361 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI 420
HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
Sbjct: 361 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI 420
Query: 421 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA 480
PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
Sbjct: 421 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA 480
Query: 481 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH 540
WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
Sbjct: 481 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH 540
Query: 541 NGLFTGL 547
NGLFTGL
Sbjct: 541 NGLFTGL 547
>gi|215820630 MON1 homolog A isoform a [Homo sapiens]
Length = 652
Score = 409 bits (1051), Expect = e-114
Identities = 240/523 (45%), Positives = 316/523 (60%), Gaps = 31/523 (5%)
Query: 15 AEDLEDTQFPSEEAREGG----GVHAVPPDPED-EGLEETGSKDKDQPPSPSPPPQSEAL 69
A ED + A G G PP P D + + S+ Q + Q E L
Sbjct: 151 ARSYEDLTESEDGAASGDSHKEGTRGPPPLPTDMRQISQDFSELSTQLTGVARDLQEEML 210
Query: 70 SSTSRLW-SPAAPENSPTCSPESSSGGQGGDPSD--EEWRSQRKHVFVLSEAGKPIYSRY 126
+S W P P P G GD D E WR +KHVFVLSEAGKP+YSRY
Sbjct: 211 PGSSEDWLEPPGAVGRPATEPPRE-GTTEGDEEDATEAWRLHQKHVFVLSEAGKPVYSRY 269
Query: 127 GSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQL 186
GS EALS+TMGVM ALVSF+++ +AIR+I+A+ +K+VF+++ PL+LVA++RT QSA +L
Sbjct: 270 GSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQEL 329
Query: 187 RGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLLG 246
ELL ++ QI+S LT A ++ IF KQNYDLRRLL+GSER D LL M +DP + L+G
Sbjct: 330 AQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDP-SFLMG 388
Query: 247 AVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQL 306
A RC+PLA +RD + A L++ A L S+L +L+ + ++ L P DL L
Sbjct: 389 AARCLPLAAAVRDTVSASLQQARARSLVFSILLARNQLVALVRRKDQF----LHPIDLHL 444
Query: 307 LLDWV-GAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDA-MPVCLLLLGTQREAFHAMA 364
L + + + +F GEAW PVCLP+FN GFF+A+++ L+ +CLLL+ T RE F A++
Sbjct: 445 LFNLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVS 504
Query: 365 ACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHH 424
CRR ++ + GA AL EA P YSV VG P LRHFLYK
Sbjct: 505 DCRRRFQERLRKRGAHLALREA--------LRTPYYSVAQVGIPDLRHFLYK-------S 549
Query: 425 RQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTS 484
+ FTSPE+EAPY+ EEE++RL LY LH+R H+ SRPL+ IY+ E LLAWVT
Sbjct: 550 KSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYYTGPNENLLAWVTG 609
Query: 485 KFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKY 527
FELY C SPL TKA A+ + KL+RW++KEEDRLFI P Y
Sbjct: 610 AFELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY 652
>gi|215820632 MON1 homolog A isoform b [Homo sapiens]
Length = 490
Score = 320 bits (821), Expect = 2e-87
Identities = 176/371 (47%), Positives = 237/371 (63%), Gaps = 22/371 (5%)
Query: 159 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL 218
+ +K+VF+++ PL+LVA++RT QSA +L ELL ++ QI+S LT A ++ IF KQNYDL
Sbjct: 140 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL 199
Query: 219 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL 278
RRLL+GSER D LL M +DP + L+GA RC+PLA +RD + A L++ A L S+L
Sbjct: 200 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL 258
Query: 279 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY 337
+L+ + ++ L P DL LL + + + + F GEAW PVCLP+FN GFF+
Sbjct: 259 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH 314
Query: 338 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS 396
A+++ L+ +CLLL+ T RE F A++ CRR ++ + GA AL EA
Sbjct: 315 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR-------- 366
Query: 397 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH 456
P YSV VG P LRHFLYK + FTSPE+EAPY+ EEE++RL LY LH
Sbjct: 367 TPYYSVAQVGIPDLRHFLYKS-------KSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH 419
Query: 457 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE 516
+R H+ SRPL+ IY+ E LLAWVT FELY C SPL TKA A+ + KL+RW++KEE
Sbjct: 420 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE 479
Query: 517 DRLFIRYPPKY 527
DRLFI P Y
Sbjct: 480 DRLFILTPLTY 490
>gi|14149746 nuclear receptor subfamily 2, group F, member 2 isoform
a [Homo sapiens]
Length = 414
Score = 42.7 bits (99), Expect = 8e-04
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 40 DPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGD 99
DP+DE GS+ PP P PPP + T P ++P + GG GG
Sbjct: 10 DPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTP---GQGGPASTPAQTAAGGQGGPGGP 66
Query: 100 PSDEEWRSQRKHVFVLSEAGKPIYSRYG 127
SD++ Q++H+ + K YG
Sbjct: 67 GSDKQ--QQQQHIECVVCGDKSSGKHYG 92
>gi|70980547 FYVE-finger-containing Rab5 effector protein
rabenosyn-5 [Homo sapiens]
Length = 784
Score = 42.7 bits (99), Expect = 8e-04
Identities = 41/130 (31%), Positives = 51/130 (39%), Gaps = 26/130 (20%)
Query: 17 DLEDTQFPSEEAREGGGVHAVPPDP-------------EDEGLEETGSKDKDQPPSPSPP 63
D ED P EEA G V DP EDE E QP SP+P
Sbjct: 629 DEEDLSSPMEEATTGPPAAGVSLDPSARILKEYNPFEEEDEEEEAVAGNPFIQPDSPAPN 688
Query: 64 PQSEA-LSSTSRLWSPAAPEN---SPTC----SPESSSGGQGGDPSDEEWRSQ-----RK 110
P SE RL SP P N PTC +S SG + +P +EE Q +
Sbjct: 689 PFSEEDEHPQQRLSSPLVPGNPFEEPTCINPFEMDSDSGPEAEEPIEEELLLQQIDNIKA 748
Query: 111 HVFVLSEAGK 120
++F + G+
Sbjct: 749 YIFDAKQCGR 758
>gi|28144916 lin-37 homolog [Homo sapiens]
Length = 246
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/74 (40%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 24 PSEEAREGGGVHAVPPDPED-EGLEETGSKDKD----QPPSPSPPPQSEALSSTSRLWSP 78
PS RE +PP PED EG E T SK +D PP+P PP + SR+ SP
Sbjct: 127 PSVRERECSPSSPLPPLPEDEEGSEVTNSKSRDVYKLPPPTPPGPPGD---ACRSRIPSP 183
Query: 79 AAPENSPTCSPESS 92
PE T E S
Sbjct: 184 LQPEMQGTPDDEPS 197
>gi|47519490 reticulon 4 isoform D [Homo sapiens]
Length = 392
Score = 39.7 bits (91), Expect = 0.007
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 1 MEVGGDTAAPAPGG----AEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQ 56
M+ G D PAP G A + + PS + P + + + D+
Sbjct: 79 MDFGNDFVPPAPRGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDE 138
Query: 57 PPS-PSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVL 115
PP+ P PPP + +W+P AP + S ++ +G S +E +F L
Sbjct: 139 PPARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPKRRGSSGSVDE------TLFAL 192
Query: 116 SEAGKPIYSRYGSVEAL 132
A +P+ V+ L
Sbjct: 193 PAASEPVIRSSAVVDLL 209
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 39.3 bits (90), Expect = 0.009
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Query: 10 PAPGGAEDLE-DTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEA 68
P+PGGA P+ E R GG P + + P SP+ P S +
Sbjct: 1583 PSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS 1642
Query: 69 LSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
S TS +SP +P SPT SP S P+ +
Sbjct: 1643 YSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSY 1678
Score = 32.7 bits (73), Expect = 0.88
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 49 TGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
T S P SPS P S + TS +SP++PE +PT SP+ S P+ ++
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT-SPKYSPTSPKYSPTSPKY 1874
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SPS P S + S TS +SP +P SPT SP S P+ +
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSY 1699
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SPS P S + S TS +SP +P SPT SP S P+ +
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSY 1720
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SPS P S + S TS +SP +P SPT SP S P+ +
Sbjct: 1694 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSY 1741
Score = 32.3 bits (72), Expect = 1.1
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SP PQS + +S +SP++P SPT SP+ + PS E+
Sbjct: 1806 PSSPRYTPQSPTYTPSSPSYSPSSPSYSPT-SPKYTPTSPSYSPSSPEY 1853
Score = 32.3 bits (72), Expect = 1.1
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 47 EETGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPT 86
E T + K P SP P S S TS +SP P+ SPT
Sbjct: 1852 EYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Score = 32.0 bits (71), Expect = 1.5
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SPS P S + S TS +SP +P SPT SP S P+ +
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPNYSPTSPNYTPTSPSY 1762
Score = 32.0 bits (71), Expect = 1.5
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPE---NSPTCSPESSS 93
P SPS P S + S TS +SP++P SPT +P S S
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPS 1824
Score = 30.8 bits (68), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SPS P S + S TS ++P +P SPT SP S P+ +
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPT-SPSYSPTSPSYSPTSPSY 1804
Score = 30.8 bits (68), Expect = 3.3
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPE---NSPTCSPESSSG 94
P SP P S S TS +SP +P+ SPT SP S G
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKG 1937
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 49 TGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPE------NSPTCSPES-----SSGGQG 97
T + K P SP+ P S S TS +SP +P+ SP SP S +S
Sbjct: 1903 TPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAIS 1962
Query: 98 GDPSDEE 104
D SDEE
Sbjct: 1963 PDDSDEE 1969
Score = 30.0 bits (66), Expect = 5.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SP+ P S + S TS +SP +P +PT SP S P+ +
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTPT-SPNYSPTSPSYSPTSPSY 1797
Score = 29.6 bits (65), Expect = 7.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSS 93
P SP+ P S S TS +SP +P SPT S S
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Score = 29.6 bits (65), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 51 SKDKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
S + P SP+ P S + S +S +SP +P+ +PT SP S P+ ++
Sbjct: 1807 SSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT-SPSYSPSSPEYTPTSPKY 1860
Score = 29.6 bits (65), Expect = 7.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 54 KDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESS 92
K P SP+ P S + TS +SP +P SPT SP+ S
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT-SPKYS 1924
Score = 29.3 bits (64), Expect = 9.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEW 105
P SPS P S S TS ++P +P SPT SP S P+ +
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPT-SPSYSPTSPNYTPTSPNY 1783
Score = 29.3 bits (64), Expect = 9.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 57 PPSPSPPPQSEALSSTSRLWSPAAPENSPT 86
P SP P S S TS +SP +P+ SPT
Sbjct: 1848 PSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 39.3 bits (90), Expect = 0.009
Identities = 32/83 (38%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 26 EEAREGGGVHAVPPDPEDEG---LEETGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPE 82
EE REG HA+ E +G L+E P SPSPPP L S L SPAAPE
Sbjct: 2 EEVREG---HALGGGMEADGPASLQEL----PPSPRSPSPPPSPPPLPSPPSLPSPAAPE 54
Query: 83 NSPTCSPESSSGGQGGDPSDEEW 105
P S EEW
Sbjct: 55 APELPEPAQPSEAHARQLLLEEW 77
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 38.9 bits (89), Expect = 0.012
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 2 EVGGDTAAPAPGGAED--LEDTQFPSEEAREGGGVHAVPPDPEDE-GLEE--TGSKDKDQ 56
E GD+AA A GGA+ L + PS + G + V D E G +E GS +
Sbjct: 463 EGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETP 522
Query: 57 PPSPSPPPQSEALSSTSRLWS--PAAPE-NSPTCSPESSSGGQGGDPSDEE 104
PSP+ P E S S PA P + P SP + G + P+ +E
Sbjct: 523 GPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDE 573
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 38.9 bits (89), Expect = 0.012
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 1 MEVGGDTAAPAPGG----AEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQ 56
M+ G D PAP G A + + PS + P + + + D+
Sbjct: 79 MDFGNDFVPPAPRGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDE 138
Query: 57 PPS-PSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVL 115
PP+ P PPP + +W+P AP + S ++ +G S +E +F L
Sbjct: 139 PPARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPKRRGSSGSVDE------TLFAL 192
Query: 116 SEAGKPI 122
A +P+
Sbjct: 193 PAASEPV 199
>gi|4758410 fragile X mental retardation syndrome related protein 2
[Homo sapiens]
Length = 673
Score = 38.9 bits (89), Expect = 0.012
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 4 GGDTAAPAPGGAEDLEDTQFPSEEARE-----GGGVHAVPPDPEDEGLEETGSKDKDQPP 58
G T PA G + D+ E RE G G P E+ TG + + PP
Sbjct: 435 GRRTGGPAYGPSSDVSTASETESEKREEPNRAGPGDRDPPTRGEESRRRPTGGRGRGPPP 494
Query: 59 SPSPPPQSEALSSTSRLWSPAAPENS--PTCSPESSSGGQGGDPSDEEWRSQR 109
+P P + + S +S L P + S T PE + G+P R +R
Sbjct: 495 APRPTSRYNSSSISSVLKDPDSNPYSLLDTSEPEPPVDSEPGEPPPASARRRR 547
>gi|31563386 sulfotransferase family, cytosolic, 2B, member 1
isoform b [Homo sapiens]
Length = 365
Score = 38.5 bits (88), Expect = 0.016
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 34 VHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSS 93
+ +P P DE EE GS D + P P P P E +S R P +SP+ SP +S
Sbjct: 301 MRGMPTFPWDEDPEEDGSPDPEPSPEPEPKPSLEPNTSLER---EPRPNSSPSPSPGQAS 357
>gi|31563388 sulfotransferase family, cytosolic, 2B, member 1
isoform a [Homo sapiens]
Length = 350
Score = 38.5 bits (88), Expect = 0.016
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 34 VHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSS 93
+ +P P DE EE GS D + P P P P E +S R P +SP+ SP +S
Sbjct: 286 MRGMPTFPWDEDPEEDGSPDPEPSPEPEPKPSLEPNTSLER---EPRPNSSPSPSPGQAS 342
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 37.7 bits (86), Expect = 0.027
Identities = 35/92 (38%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 15 AEDLEDTQFPSEEAREGGGVHAVPPDPEDEG----LEETGSKDKDQPPSPSP-PPQSE-- 67
+ +LE +P E R GGG PPD G E T + PP P PPQ
Sbjct: 2265 SSELEGGDYPKERERTGGG-PGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRA 2323
Query: 68 ALSSTSRLWSPAAPEN-SPTCSP---ESSSGG 95
A S + RL SP AP N P+ +P SSS G
Sbjct: 2324 AQSWSPRLESPRAPTNPEPSATPPLDRSSSVG 2355
Score = 29.6 bits (65), Expect = 7.4
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 14 GAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTS 73
G+E +E+ QF E + D ++E ++ S+ + P P PP AL + S
Sbjct: 1838 GSEAVEEHQFSDLEDSDSDSDLDEDEDEDEEESQDELSRPSSEAPPPGPP---HALRADS 1894
Query: 74 RLWSPAAPENSPTCSPESSSG 94
P ++P E++ G
Sbjct: 1895 SPILGPQPPDAPASGTEATRG 1915
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 37.7 bits (86), Expect = 0.027
Identities = 35/92 (38%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 15 AEDLEDTQFPSEEAREGGGVHAVPPDPEDEG----LEETGSKDKDQPPSPSP-PPQSE-- 67
+ +LE +P E R GGG PPD G E T + PP P PPQ
Sbjct: 2266 SSELEGGDYPKERERTGGG-PGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRA 2324
Query: 68 ALSSTSRLWSPAAPEN-SPTCSP---ESSSGG 95
A S + RL SP AP N P+ +P SSS G
Sbjct: 2325 AQSWSPRLESPRAPTNPEPSATPPLDRSSSVG 2356
Score = 29.6 bits (65), Expect = 7.4
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 14 GAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTS 73
G+E +E+ QF E + D ++E ++ S+ + P P PP AL + S
Sbjct: 1838 GSEAVEEHQFSDLEDSDSDSDLDEDEDEDEEESQDELSRPSSEAPPPGPP---HALRADS 1894
Query: 74 RLWSPAAPENSPTCSPESSSG 94
P ++P E++ G
Sbjct: 1895 SPILGPQPPDAPASGTEATRG 1915
>gi|24431933 reticulon 4 isoform B [Homo sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 0.061
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 1 MEVGGDTAAPAPGG----AEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQ 56
M+ G D PAP G A + + PS + P + + + D+
Sbjct: 79 MDFGNDFVPPAPRGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDE 138
Query: 57 PPS-PSPPPQSEALSSTSRLW-----SPAAPENSPTCSPESSSGG 95
PP+ P PPP + +W +PAAP ++P S G
Sbjct: 139 PPARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPKRRGSSG 183
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 36.6 bits (83), Expect = 0.061
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 18/108 (16%)
Query: 14 GAEDLEDTQFPSEEAR-------EGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSP-PPQ 65
GAE D+Q S E R +G ++ PP P+ ET + +P P+P PP
Sbjct: 354 GAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPK-TAWAETSRPPETEPGPPAPKPPL 412
Query: 66 SEALSSTSRLWSPAA---PENSPTCSPESSSGGQGGDPSDEEWRSQRK 110
+ W P P C P + + DE WR +RK
Sbjct: 413 PPPHRGPAGNWGPPGDYPDRGGPPCKPPAP------EDEDEAWRQRRK 454
Score = 33.9 bits (76), Expect = 0.39
Identities = 34/115 (29%), Positives = 43/115 (37%), Gaps = 19/115 (16%)
Query: 24 PSEEAREGGGVHAVPPDPED-----EGLEETGSKDKD----QPPSPSPPPQSEALSSTSR 74
PS +A G V P+D E++ K D QPP P P S+ +S
Sbjct: 63 PSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQTPASNQP 122
Query: 75 LWSPAAPENSP----------TCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAG 119
PAAPEN+P S + G GG S R R+ L AG
Sbjct: 123 KRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAAG 177
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 36.2 bits (82), Expect = 0.079
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 8 AAPAPGGAEDLEDTQFPSE-EAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQS 66
AAPAP + + P + + R GG ++ G++D+++ + +P P S
Sbjct: 73 AAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTS 132
Query: 67 EALSSTSRLWSPAAPENSPTCSPESSSG---GQGGDPSDEEWRSQ 108
+ R P C P + +G G G PS ++ R+Q
Sbjct: 133 SGHRTEKR------KPQQPQCRPAAGTGQRRGSGCSPSADQQRAQ 171
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 36.2 bits (82), Expect = 0.079
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 14/100 (14%)
Query: 11 APGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALS 70
A GG TQ GGG PP P ++ P P P S
Sbjct: 465 ARGGGSPTSKTQTLPSRGPRGGGAGEQPPPP--------SARSTPLPGPPGSPRSSGGTP 516
Query: 71 STSRLWSP-AAPENSP-TCSPESSSGGQGGDPSDEEWRSQ 108
S L +P A+P +P T P S GG GG WRS+
Sbjct: 517 LHSPLHTPRASPTGTPGTTPPPSPGGGVGG----AAWRSR 552
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 36.2 bits (82), Expect = 0.079
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 24 PSEEAREGGGVHAVPPDPE-----DEGLEETGSKDKDQPPSPSPPPQSEALSSTSRLWSP 78
PS R G G+ ++PP+ D G G +D +P +P P S A SP
Sbjct: 224 PSPLQRPGQGLPSLPPNTSPFPGPDPGFPGPGGEDGGKPLNP---PASTAFPQEPHSGSP 280
Query: 79 AAPENSPTCSPESSSGGQGGDPSD 102
AA N S +S G+GG D
Sbjct: 281 AAAVNGNQPSFPPNSSGRGGGTPD 304
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 36.2 bits (82), Expect = 0.079
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 24 PSEEAREGGGVHAVPPDPEDEGLEETG---SKDKDQPPSPSPPPQSEALSSTSRLWSPAA 80
P EEAR G + A P ED+ ++ T S + PP+P PPP +LS L P
Sbjct: 399 PMEEARRGAPLPA-PALEEDDEVQITSVSTSVPRSVPPAPPPPPPPTSLSQPPPLLRPPL 457
Query: 81 PENSPT 86
P +PT
Sbjct: 458 P-TAPT 462
Score = 31.6 bits (70), Expect = 2.0
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 6 DTAAPAPGGAEDLEDTQFPSEEAREG-GGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPP 64
D A GG +D ED S+E EG GGV PDP D E S+ + P P
Sbjct: 187 DRQARRLGGRKDKED----SDELEEGRGGVSEGEPDPADPKREPLPSRPLNARPGPGKKE 242
Query: 65 QSEALSSTSRLWSPAAPENSPTCSPESSSGGQG 97
+ L + P SPE + G
Sbjct: 243 VQVSQYRHHPLRTRRRPPKGMYLSPEGLTAVSG 275
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 35.8 bits (81), Expect = 0.10
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 13 GGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSP---PPQSEAL 69
G AE L + EE G +P P++EG E ++D+ P P
Sbjct: 1251 GRAEALGKVESEQEELGSG----EIPEGPQEEGEESREESEEDELGETLPDSTPLGFYLR 1306
Query: 70 SSTSRLWSPAAPENSPTCSPESSSGGQGGDPS 101
S TS W P + P P+ +G +G DP+
Sbjct: 1307 SPTSPRWDPTGEQRPP---PQGETGKEGWDPA 1335
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 35.8 bits (81), Expect = 0.10
Identities = 99/426 (23%), Positives = 145/426 (34%), Gaps = 77/426 (18%)
Query: 51 SKDKDQPPSPSPPPQ--------SEAL-----------SSTSRLWSPAAPENSPTCSPES 91
++D PP+PSP P SE + S T A P SP S
Sbjct: 467 NEDVFTPPAPSPAPSLDTDIQELSEQIHRLLLQPVHSPSPTGLCGVGAVTSPGPLHSPGS 526
Query: 92 SSGGQGGD------PSDEEWRSQRKHVFVLSEAGKPIY----SRYGSVEALSATMGVMTA 141
SS GGD P+ ++ K V ++ G+ ++ +R S L AT G A
Sbjct: 527 SSDSNGGDAEGPGPPAPVTFQQICKDVHLVKHQGQQLFIESRARPQSRPRLPAT-GTFKA 585
Query: 142 LVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTL 201
QS + A A Q PL LV + A+ + + I+ L
Sbjct: 586 KALPCQSPDPELEAGSAP-------VQAPLALVPEEAERKEASSCSYQQINCLDSILRYL 638
Query: 202 TRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDAL 261
++ + R+ + S T D Q G + +G + P A
Sbjct: 639 ESCNL-------PSTTKRKCASSSSYTTSSASDDDRQRTGPVSVGTKKDPPSA--ALSGE 689
Query: 262 GALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQL---------LLDWVG 312
GA R+ G LS LA+ + A +V ++C + + ++
Sbjct: 690 GATPRKEPVVGGTLSPLALANK---AESVVSVTSQCSFSSTIVHVGDKKPPESDIIMMED 746
Query: 313 APAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAACRRLVED 372
P A G A +P P PD AY R + +L L TQ+E ++ R
Sbjct: 747 LPGLAPGPAPSPAPSPTVAPDPAPDAY--RPVGLTKAVLSLHTQKEEQAFLSRFR----- 799
Query: 373 GMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTS 432
LG +R L S S A SA P RH HH+ +
Sbjct: 800 ---DLGRLRGLD---SSSTAPSALGERGCHHGPAPPSRRHHCRSKAKRSRHHQ------N 847
Query: 433 PELEAP 438
P EAP
Sbjct: 848 PRAEAP 853
>gi|19923391 homeobox D3 [Homo sapiens]
Length = 432
Score = 35.8 bits (81), Expect = 0.10
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 11/85 (12%)
Query: 9 APAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEA 68
APA GAE P +GGG + PP G + QPP P PPP +
Sbjct: 78 APAHKGAELNGSCMRPGTGNSQGGGGGSQPP----------GLNSEQQPPQPPPPPPTLP 127
Query: 69 LSSTSRLWSPAAPENSPTCSPESSS 93
SS + P P P +SS
Sbjct: 128 PSSPTNP-GGGVPAKKPKGGPNASS 151
>gi|66932999 testis-specific protein kinase 1 [Homo sapiens]
Length = 626
Score = 35.8 bits (81), Expect = 0.10
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 26 EEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPP-PQSEA-------LSSTSRLWS 77
E A G G AV P E++ +E GS + +PP P+P P + A SS S+ WS
Sbjct: 449 ETALPGPGPPAVGPSAEEK-MECEGSSPEPEPPGPAPQLPLAVATDNFISTCSSASQPWS 507
Query: 78 PAAP---ENSPTCSPESSSGGQGGDP 100
P + N+P +S G G+P
Sbjct: 508 PRSGPVLNNNPPAVVVNSPQGWAGEP 533
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 35.8 bits (81), Expect = 0.10
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 4 GGDTAAPAPGGAED----LEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPS 59
GG+ APGGA D LE + EE + P+PE E EE + + P +
Sbjct: 32 GGEAGEGAPGGAGDYGNGLESEELEPEEL-------LLEPEPEPEP-EEEPPRPRAPPGA 83
Query: 60 PSPPPQSEALSSTSRLWSPAAPENSP 85
P P P S A S P E P
Sbjct: 84 PGPGPGSGAPGSQEEEEEPGLVEGDP 109
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 35.4 bits (80), Expect = 0.14
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
Query: 5 GDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQ-------- 56
G AA GG ++ E+ P EE E G V P P + EE ++ Q
Sbjct: 505 GTAAASDEGGGDEEEE---PEEEEEEWGDVPLSPGAPLERPAEEEEDEEDGQEPGGLALP 561
Query: 57 PPSPSPPPQSEALSSTSRLWSP 78
PP P PPP R + P
Sbjct: 562 PPPPPPPPPPPRSREQRRNYQP 583
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 35.4 bits (80), Expect = 0.14
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 10 PAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEAL 69
P GG D+ P+ + R G AVP P L ++ PPSP PP A
Sbjct: 84 PQGGGGGDIASPLPPALQPR---GAPAVPAAPSPGPLP---ARPSSPPPSPPSPPVPTAQ 137
Query: 70 SSTSRLWSPAAPEN 83
SS W P P +
Sbjct: 138 SSLPAPWPPQGPRS 151
>gi|190358526 hypothetical protein LOC54785 [Homo sapiens]
Length = 357
Score = 35.4 bits (80), Expect = 0.14
Identities = 46/168 (27%), Positives = 62/168 (36%), Gaps = 25/168 (14%)
Query: 1 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEE--------TGSK 52
+ V G+ GGA T S + G VH PE E LE +G+
Sbjct: 40 LRVSGEEETENVGGANRHPRT---SPKTSSCGVVHR----PEREALENEPGPQGTLSGAG 92
Query: 53 DKDQPPSPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGG--DPSDEEWRSQRK 110
+ P P S +SR +PA PE P+ + GG GG D +E +
Sbjct: 93 SRRGAPGAEHEP-----SLSSRHKNPAPPEGKPSSGRDCRRGGPGGGMDVEQQEEEDNDE 147
Query: 111 HVFVLSEAGKPIYSRY---GSVEALSATMGVMTALVSFVQSAGDAIRA 155
S AG+ SR S++ LS G + S AG RA
Sbjct: 148 EAAAGSRAGRSFSSRLQDSRSLDGLSEACGGAGSSGSAESGAGGGRRA 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,432,042
Number of Sequences: 37866
Number of extensions: 1233608
Number of successful extensions: 9878
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 8874
Number of HSP's gapped (non-prelim): 1170
length of query: 547
length of database: 18,247,518
effective HSP length: 107
effective length of query: 440
effective length of database: 14,195,856
effective search space: 6246176640
effective search space used: 6246176640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.