Guide to the Human Genome
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Name: IKBKE Sequence: fasta or formatted (716aa) NCBI GI: 7661946
Description:

IKK-related kinase epsilon

Referenced in:

Interferon
NF-kappaB Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         56           3
 C cysteine            1.8         13           2
 D aspartate           3.6         26           3
 E glutamate           7.5         54           2
 F phenylalanine       3.5         25           2
 G glycine             5.6         40           2
 H histidine           3.5         25           2
 I isoleucine          4.1         29           2
 K lysine              4.9         35           2
 L leucine            12.3         88           3
 M methionine          1.8         13           1
 N asparagine          3.4         24           2
 P proline             4.3         31           3
 Q glutamine           6.0         43           2
 R arginine            6.6         47           2
 S serine              7.0         50           3
 T threonine           4.9         35           2
 V valine              8.0         57           3
 W tryptophan          0.7          5           1
 Y tyrosine            2.8         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IKK-related kinase epsilon 
TBK1                  0.456   TANK-binding kinase 1 
IKBKB                 0.088   inhibitor of nuclear factor kappa B kinase beta subu...
CHUK                  0.077   conserved helix-loop-helix ubiquitous kinase 
ULK1                  0.062   Unc-51-like kinase 1 
ULK2                  0.062   unc-51-like kinase 2 
ULK2                  0.062   unc-51-like kinase 2 
MARK4                 0.059   MAP/microtubule affinity-regulating kinase 4 
STK36                 0.057   serine/threonine kinase 36 
MARK1                 0.057   MAP/microtubule affinity-regulating kinase 1 
DCLK3                 0.055   doublecortin-like kinase 3 
DAPK3                 0.055   death-associated protein kinase 3 
MARK3                 0.054   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.054   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.054   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.054   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK2                 0.054   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.054   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.054   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.054   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.054   MAP/microtubule affinity-regulating kinase 2 isoform...
DAPK2                 0.054   death-associated kinase 2 
PRKD1                 0.054   protein kinase D1 
DAPK1                 0.053   death-associated protein kinase 1 
RPS6KA1               0.053   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
PRKD3                 0.053   protein kinase D3 
RPS6KA1               0.053   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA2               0.053   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.053   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
STK10                 0.053   serine/threonine kinase 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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