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Search of human proteins with 75677608
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677608 serine incorporator 4 [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677608 serine incorporator 4 [Homo sapiens] 571 e-163
gi|30172548 developmentally regulated protein TPO1 [Homo sapiens] 108 7e-24
gi|24308213 serine incorporator 1 [Homo sapiens] 104 7e-23
gi|71834872 tumor differentially expressed 2-like [Homo sapiens] 99 5e-21
gi|39812106 tumor differentially expressed protein 1 [Homo sapiens] 96 3e-20
gi|5803193 tumor differentially expressed protein 1 [Homo sapiens] 96 3e-20
gi|58533159 PDZ and LIM domain 5 isoform d [Homo sapiens] 30 3.0
gi|169204908 PREDICTED: similar to Thyroid hormone receptor inte... 29 3.9
gi|169205597 PREDICTED: similar to Thyroid hormone receptor inte... 29 3.9
gi|169203883 PREDICTED: hypothetical protein [Homo sapiens] 29 3.9
gi|60460881 zinc finger, SWIM-type containing 1 [Homo sapiens] 29 5.1
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 28 6.6
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 28 6.6
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 28 8.6
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 28 8.6
gi|229093316 phospholipase B domain containing 2 isoform 1 precu... 28 8.6
gi|229091322 phospholipase B domain containing 2 isoform 2 precu... 28 8.6
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 28 8.6
gi|4557329 fas ligand [Homo sapiens] 28 8.6
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 28 8.6
>gi|75677608 serine incorporator 4 [Homo sapiens]
Length = 274
Score = 571 bits (1472), Expect = e-163
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MSISSQHGITLASVEALHSSYCSWCLLQLLPIPGTRTEQPRSGLLQASVISCYIMYLTFS 60
MSISSQHGITLASVEALHSSYCSWCLLQLLPIPGTRTEQPRSGLLQASVISCYIMYLTFS
Sbjct: 1 MSISSQHGITLASVEALHSSYCSWCLLQLLPIPGTRTEQPRSGLLQASVISCYIMYLTFS 60
Query: 61 ALSSRPPERVILQGQNHTLCLPGLSKMEPQTPDISLAMLSASIMYACVLFACNEASYLAE 120
ALSSRPPERVILQGQNHTLCLPGLSKMEPQTPDISLAMLSASIMYACVLFACNEASYLAE
Sbjct: 61 ALSSRPPERVILQGQNHTLCLPGLSKMEPQTPDISLAMLSASIMYACVLFACNEASYLAE 120
Query: 121 VFGPLWIVKVYSYEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYN 180
VFGPLWIVKVYSYEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYN
Sbjct: 121 VFGPLWIVKVYSYEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYN 180
Query: 181 YSAFHFVFFLASLYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLL 240
YSAFHFVFFLASLYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLL
Sbjct: 181 YSAFHFVFFLASLYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLL 240
Query: 241 LAPLCWPPTQKPQPLILRRRRHRIISPDNKYPPV 274
LAPLCWPPTQKPQPLILRRRRHRIISPDNKYPPV
Sbjct: 241 LAPLCWPPTQKPQPLILRRRRHRIISPDNKYPPV 274
>gi|30172548 developmentally regulated protein TPO1 [Homo sapiens]
Length = 423
Score = 108 bits (269), Expect = 7e-24
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 11/182 (6%)
Query: 26 LLQLLPI-PGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERVILQ-GQNHTLCLPG 83
L+ L+ I P + QP SGLLQ+ VISCY+ YLTFSALSS+P E V+ + G+N T+C+P
Sbjct: 242 LISLVAISPWVQNRQPHSGLLQSGVISCYVTYLTFSALSSKPAEVVLDEHGKNVTICVPD 301
Query: 84 LSKMEPQTPDISLAMLSASIMYACVLFACNEASYLAEVFGPLWIVKVYSYEFQKPSLCFC 143
+ + + + +L S++ C+L++C ++ + + + E + CFC
Sbjct: 302 FGQ-DLYRDENLVTILGTSLLIGCILYSCLTSTTRSS--SDALQGRYAAPELEIARCCFC 358
Query: 144 CPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLASLYVMVTLTNWF 203
E + Q+ G +E P + + Y YS FHFVFFLASLYVM+T+TNWF
Sbjct: 359 FSPGGEDTEEQQPG------KEGPRVIYDEKKGTVYIYSYFHFVFFLASLYVMMTVTNWF 412
Query: 204 SY 205
++
Sbjct: 413 NH 414
>gi|24308213 serine incorporator 1 [Homo sapiens]
Length = 453
Score = 104 bits (260), Expect = 7e-23
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 30/220 (13%)
Query: 32 IPGTRTEQPRSGLLQASVISCYIMYLTFSALSSRP-----PERVILQGQNHTLCLPGLSK 86
+P + QPRSGLLQ+SVI+ Y MYLT+SA+++ P P + + G N T +P
Sbjct: 249 LPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLLSIIGYNTTSTVP---- 304
Query: 87 MEPQTPDI--SLAMLSASIMYACVLFACNEASYLAEVFGPLWIVKVYSYEFQKPSLCFCC 144
E Q+ + ++ + CV ++ S ++V L + S
Sbjct: 305 KEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQV-NKLTLTSDES------------ 351
Query: 145 PETVEADKGQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLASLYVMVTLTNWFS 204
T+ D G R + + A + ++Y+YS FHF+ FLASLY+M+TLTNW+
Sbjct: 352 --TLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYIMMTLTNWYR 409
Query: 205 YEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLLLAPL 244
YE + +K W WVK++S W ++LY+ L+APL
Sbjct: 410 YEPSR----EMKSQWTAVWVKISSSWIGIVLYVWTLVAPL 445
>gi|71834872 tumor differentially expressed 2-like [Homo sapiens]
Length = 455
Score = 98.6 bits (244), Expect = 5e-21
Identities = 80/236 (33%), Positives = 119/236 (50%), Gaps = 36/236 (15%)
Query: 16 ALHSSYCSWCLLQLLPIPGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPER----VI 71
+L+ ++C C+ +P + QP SGLLQASVI+ Y M++T+SALSS P ++ +
Sbjct: 241 SLNLTFCV-CVSIAAVLPKVQDAQPNSGLLQASVITLYTMFVTWSALSSIPEQKCNPHLP 299
Query: 72 LQGQNHTLCLPGLSKMEPQTPDISLAMLSASIMYACVLFACNEASYLAEVFGPLWIVKVY 131
Q N T+ + G E Q D + +++ I C LF +S +V + +
Sbjct: 300 TQLGNETV-VAGPEGYETQWWD-APSIVGLIIFLLCTLFISLRSSDHRQVNSLMQTEE-- 355
Query: 132 SYEFQKPSLCFCCPETVEADKGQRGGAA---RPADQETPPAPPVQVQHLSYNYSAFHFVF 188
CP ++A + Q+ AA R D E ++Y+YS FHF
Sbjct: 356 ------------CPPMLDATQQQQQVAACEGRAFDNEQ--------DGVTYSYSFFHFCL 395
Query: 189 FLASLYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLLLAPL 244
LASL+VM+TLTNW Y+ E K +W WVK+ + WA +LLYL L+APL
Sbjct: 396 VLASLHVMMTLTNW--YKPGETRKMI--STWTAVWVKICASWAGLLLYLWTLVAPL 447
>gi|39812106 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 95.9 bits (237), Expect = 3e-20
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 33 PGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERV--------------ILQGQNHT 78
P + QPRSGLLQ+S+I+ Y MYLT+SA+S+ P L N T
Sbjct: 258 PKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLMSFITRITAPTLAPGNST 317
Query: 79 LCLPGLSKMEPQTPDISLAMLSAS------IMYACVLFACNEASYLAEVFGPLWIVKVYS 132
+P P P S ++L + + C+L++ S ++V
Sbjct: 318 AVVP-----TPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQV----------- 361
Query: 133 YEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLAS 192
L ++V GA+ D + A + + + Y+YS FH + LAS
Sbjct: 362 -----DKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLAS 416
Query: 193 LYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLLLAPL 244
LY+M+TLT+W+S + T W WVK++S W C+LLY+ L+APL
Sbjct: 417 LYIMMTLTSWYSPDAKFQSMT---SKWPAVWVKISSSWVCLLLYVWTLVAPL 465
>gi|5803193 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 95.9 bits (237), Expect = 3e-20
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 33 PGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERV--------------ILQGQNHT 78
P + QPRSGLLQ+S+I+ Y MYLT+SA+S+ P L N T
Sbjct: 258 PKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLMSFITRITAPTLAPGNST 317
Query: 79 LCLPGLSKMEPQTPDISLAMLSAS------IMYACVLFACNEASYLAEVFGPLWIVKVYS 132
+P P P S ++L + + C+L++ S ++V
Sbjct: 318 AVVP-----TPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQV----------- 361
Query: 133 YEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLAS 192
L ++V GA+ D + A + + + Y+YS FH + LAS
Sbjct: 362 -----DKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLAS 416
Query: 193 LYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLLLAPL 244
LY+M+TLT+W+S + T W WVK++S W C+LLY+ L+APL
Sbjct: 417 LYIMMTLTSWYSPDAKFQSMT---SKWPAVWVKISSSWVCLLLYVWTLVAPL 465
>gi|58533159 PDZ and LIM domain 5 isoform d [Homo sapiens]
Length = 234
Score = 29.6 bits (65), Expect = 3.0
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 136 QKPSLCFCCPETV-EADKGQRGGAARPADQETPPAPPVQV--QHLSYNYSAFHFV 187
QKP++ C ET E +GQR G+ + Q+ PP + +H+ Y+ F+ V
Sbjct: 96 QKPTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIPPKRPPRKHIVERYTEFYHV 150
>gi|169204908 PREDICTED: similar to Thyroid hormone receptor
interactor 11 [Homo sapiens]
Length = 352
Score = 29.3 bits (64), Expect = 3.9
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 32 IPGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERVILQGQNHTLCLPGLSKMEPQT 91
+P T + +L +S C++ +L + SS PP ++ + L PG K++
Sbjct: 216 VPNTPLRPNQQSVLNSSFSECFVKFLETESHSSVPPPKLSVHDMK-PLESPGRRKLDTNA 274
Query: 92 PD 93
P+
Sbjct: 275 PE 276
>gi|169205597 PREDICTED: similar to Thyroid hormone receptor
interactor 11 [Homo sapiens]
Length = 352
Score = 29.3 bits (64), Expect = 3.9
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 32 IPGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERVILQGQNHTLCLPGLSKMEPQT 91
+P T + +L +S C++ +L + SS PP ++ + L PG K++
Sbjct: 216 VPNTPLRPNQQSVLNSSFSECFVKFLETESHSSVPPPKLSVHDMK-PLESPGRRKLDTNA 274
Query: 92 PD 93
P+
Sbjct: 275 PE 276
>gi|169203883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 29.3 bits (64), Expect = 3.9
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 32 IPGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERVILQGQNHTLCLPGLSKMEPQT 91
+P T + +L +S C++ +L + SS PP ++ + L PG K++
Sbjct: 216 VPNTPLRPNQQSVLNSSFSECFVKFLETESHSSVPPPKLSVHDMK-PLESPGRRKLDTNA 274
Query: 92 PD 93
P+
Sbjct: 275 PE 276
>gi|60460881 zinc finger, SWIM-type containing 1 [Homo sapiens]
Length = 485
Score = 28.9 bits (63), Expect = 5.1
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 30 LPIPGTRTEQPRSGLLQASVISCYIMYLTFSALS-SRPPERVILQGQNHTLC 80
LP+P E P + +L ++ C + F LS RP ER++L T+C
Sbjct: 152 LPLPILAMEFPTAEVLLSAFHICKFLQAKFYQLSLERPVERLLLTSLQSTMC 203
>gi|46397390 pogo transposable element with ZNF domain isoform 1
[Homo sapiens]
Length = 1410
Score = 28.5 bits (62), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 140 LCFCCPETVEADKGQRGGAARPA--DQETPPAP 170
+C+CCPE VE K + + P+ PP+P
Sbjct: 394 MCYCCPEMVEYQKKGKSLDSEPSVPSAAKPPSP 426
>gi|46397394 pogo transposable element with ZNF domain isoform 2
[Homo sapiens]
Length = 1357
Score = 28.5 bits (62), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 140 LCFCCPETVEADKGQRGGAARPA--DQETPPAP 170
+C+CCPE VE K + + P+ PP+P
Sbjct: 341 MCYCCPEMVEYQKKGKSLDSEPSVPSAAKPPSP 373
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 145 PETVEADKGQR-GGAARPADQETPPAPP 171
P T EA G R GG + E PPAPP
Sbjct: 343 PSTREAQAGARAGGPPESVEGEAPPAPP 370
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 145 PETVEADKGQR-GGAARPADQETPPAPP 171
P T EA G R GG + E PPAPP
Sbjct: 479 PSTREAQAGARAGGPPESVEGEAPPAPP 506
>gi|229093316 phospholipase B domain containing 2 isoform 1
precursor [Homo sapiens]
Length = 589
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 178 SYNYSAFHFVFFLASLYVMVT-LTNWFSYEGAELEKTF 214
SYN +F VF + L +V +WFSY+G+ + F
Sbjct: 425 SYNIPSFETVFNASGLQALVAQYGDWFSYDGSPRAQIF 462
>gi|229091322 phospholipase B domain containing 2 isoform 2
precursor [Homo sapiens]
Length = 557
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 178 SYNYSAFHFVFFLASLYVMVT-LTNWFSYEGAELEKTF 214
SYN +F VF + L +V +WFSY+G+ + F
Sbjct: 393 SYNIPSFETVFNASGLQALVAQYGDWFSYDGSPRAQIF 430
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 145 PETVEADKGQR-GGAARPADQETPPAPP 171
P T EA G R GG + E PPAPP
Sbjct: 479 PSTREAQAGARAGGPPESVEGEAPPAPP 506
>gi|4557329 fas ligand [Homo sapiens]
Length = 281
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/46 (30%), Positives = 17/46 (36%)
Query: 126 WIVKVYSYEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPP 171
W+ S + P CP +V GQR P PP PP
Sbjct: 14 WVDSSASSPWAPPGTVLPCPTSVPRRPGQRRPPPPPPPPPLPPPPP 59
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 28.1 bits (61), Expect = 8.6
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 145 PETVEADKGQR-GGAARPADQETPPAPP 171
P T EA G R GG + E PPAPP
Sbjct: 535 PSTREAQAGARAGGPPESVEGEAPPAPP 562
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.136 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,210,980
Number of Sequences: 37866
Number of extensions: 559577
Number of successful extensions: 2267
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2243
Number of HSP's gapped (non-prelim): 30
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.