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Search of human proteins with 74275342
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74275342 trace amine associated receptor 2 isoform 2 [Homo
sapiens]
(306 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74275342 trace amine associated receptor 2 isoform 2 [Homo sa... 635 0.0
gi|74275344 trace amine associated receptor 2 isoform 1 [Homo sa... 635 0.0
gi|21264324 trace amine associated receptor 1 [Homo sapiens] 315 3e-86
gi|223633986 trace amine associated receptor 5 [Homo sapiens] 271 7e-73
gi|28173558 trace amine associated receptor 6 [Homo sapiens] 255 3e-68
gi|110618256 trace amine associated receptor 9 [Homo sapiens] 254 5e-68
gi|16751917 trace amine associated receptor 8 [Homo sapiens] 237 1e-62
gi|94421462 serotonin 5-HT4 receptor isoform n [Homo sapiens] 190 1e-48
gi|94421460 serotonin 5-HT4 receptor isoform i [Homo sapiens] 190 1e-48
gi|94421456 serotonin 5-HT4 receptor isoform d [Homo sapiens] 190 1e-48
gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens] 190 1e-48
gi|41282074 serotonin 5-HT4 receptor isoform g [Homo sapiens] 190 1e-48
gi|11321563 serotonin 5-HT4 receptor isoform b [Homo sapiens] 190 1e-48
gi|94421458 serotonin 5-HT4 receptor isoform hb [Homo sapiens] 189 3e-48
gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens] 144 7e-35
gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens] 144 7e-35
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens] 144 7e-35
gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens] 144 7e-35
gi|197085610 histamine receptor H2 isoform 1 [Homo sapiens] 144 7e-35
gi|13435405 histamine receptor H2 isoform 2 [Homo sapiens] 144 7e-35
gi|4501959 alpha-1B-adrenergic receptor [Homo sapiens] 144 1e-34
gi|4504535 5-hydroxytryptamine (serotonin) receptor 1D [Homo sap... 140 2e-33
gi|4501969 adrenergic, beta-2-, receptor, surface [Homo sapiens] 137 9e-33
gi|4503383 dopamine receptor D1 [Homo sapiens] 136 3e-32
gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens] 130 1e-30
gi|4504537 5-hydroxytryptamine (serotonin) receptor 1E [Homo sap... 125 6e-29
gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens] 121 9e-28
gi|16604258 neuropeptide FF receptor 2 isoform 2 [Homo sapiens] 119 4e-27
gi|221316654 neuropeptide FF receptor 2 isoform 1 [Homo sapiens] 119 4e-27
gi|221316652 neuropeptide FF receptor 2 isoform 3 [Homo sapiens] 119 4e-27
>gi|74275342 trace amine associated receptor 2 isoform 2 [Homo
sapiens]
Length = 306
Score = 635 bits (1638), Expect = 0.0
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV
Sbjct: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
Query: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL
Sbjct: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
Query: 121 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 180
LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM
Sbjct: 121 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 180
Query: 181 VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD 240
VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD
Sbjct: 181 VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD 240
Query: 241 PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTILC 300
PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTILC
Sbjct: 241 PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTILC 300
Query: 301 MQKESE 306
MQKESE
Sbjct: 301 MQKESE 306
>gi|74275344 trace amine associated receptor 2 isoform 1 [Homo
sapiens]
Length = 351
Score = 635 bits (1638), Expect = 0.0
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV
Sbjct: 46 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 105
Query: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL
Sbjct: 106 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 165
Query: 121 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 180
LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM
Sbjct: 166 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 225
Query: 181 VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD 240
VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD
Sbjct: 226 VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD 285
Query: 241 PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTILC 300
PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTILC
Sbjct: 286 PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTILC 345
Query: 301 MQKESE 306
MQKESE
Sbjct: 346 MQKESE 351
>gi|21264324 trace amine associated receptor 1 [Homo sapiens]
Length = 339
Score = 315 bits (807), Expect = 3e-86
Identities = 155/301 (51%), Positives = 203/301 (67%), Gaps = 13/301 (4%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
+YS M I T+ GNL +I+SIS+FKQLHTPTN+LI SMA DFLLG +MPYSM+RS
Sbjct: 26 LYSLMVLIILTTLVGNLIVIVSISHFKQLHTPTNWLIHSMATVDFLLGCLVMPYSMVRSA 85
Query: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
E+CWYFG FCKI+ S D+MLS SIFHL ++IDR+YA+C PL Y K+ I VI ++
Sbjct: 86 EHCWYFGEVFCKIHTSTDIMLSSASIFHLSFISIDRYYAVCDPLRYKAKMNILVICVMIF 145
Query: 121 LCWSVPGAFAFGVVFSEAYADGIEG-YDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSM 179
+ WSVP FAFG++F E G E Y V C C V F+K+ G FM F+ PGS+
Sbjct: 146 ISWSVPAVFAFGMIFLELNFKGAEEIYYKHVHCRGGCSVFFSKISGVLTFMTSFYIPGSI 205
Query: 180 MVGIYGKIFAVSRKHAHAINNLRENQNNQV----------KKDKKAAKTLGIVIGVFLLC 229
M+ +Y +I+ ++++ A I++ NQ Q+ K++KA KTLGIV+GVFL+C
Sbjct: 206 MLCVYYRIYLIAKEQARLISD--ANQKLQIGLEMKNGISQSKERKAVKTLGIVMGVFLIC 263
Query: 230 WFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKI 289
W P F ++DPFL++ P L D L WFGY NST NP++Y FFYPWFR+ALK +L GKI
Sbjct: 264 WCPFFICTVMDPFLHYIIPPTLNDVLIWFGYLNSTFNPMVYAFFYPWFRKALKMMLFGKI 323
Query: 290 F 290
F
Sbjct: 324 F 324
>gi|223633986 trace amine associated receptor 5 [Homo sapiens]
Length = 337
Score = 271 bits (692), Expect = 7e-73
Identities = 127/291 (43%), Positives = 181/291 (62%), Gaps = 1/291 (0%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
+Y A + I + GN+ + ++SYFK LHTPTNFL+LS+A+ D LG ++P S IRSV
Sbjct: 37 IYLACAAGMLIIVLGNVFVAFAVSYFKALHTPTNFLLLSLALADMFLGLLVLPLSTIRSV 96
Query: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
E+CW+FG C+++ D + +TSIFHLC ++IDR AIC PLLY +K T+ V R +L
Sbjct: 97 ESCWFFGDFLCRLHTYLDTLFCLTSIFHLCFISIDRHCAICDPLLYPSKFTVRVALRYIL 156
Query: 121 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 180
W VP A+ ++++ + + + C SC ++ NK WG F FF P +M
Sbjct: 157 AGWGVPAAYTSLFLYTDVVETRLSQWLEEMPCVGSCQLLLNKFWGWLNFPL-FFVPCLIM 215
Query: 181 VGIYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLD 240
+ +Y KIF V+ + A I L ++ K ++KAAKTLGI +G++LLCW P ++D
Sbjct: 216 ISLYVKIFVVATRQAQQITTLSKSLAGAAKHERKAAKTLGIAVGIYLLCWLPFTIDTMVD 275
Query: 241 PFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFS 291
L+F TP ++FD WF YFNS CNP+IY F Y WFR+ALK L K+FS
Sbjct: 276 SLLHFITPPLVFDIFIWFAYFNSACNPIIYVFSYQWFRKALKLTLSQKVFS 326
>gi|28173558 trace amine associated receptor 6 [Homo sapiens]
Length = 345
Score = 255 bits (652), Expect = 3e-68
Identities = 117/300 (39%), Positives = 182/300 (60%), Gaps = 9/300 (3%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
+Y + +FGNL ++ISI +FKQLH+PTNFL+ S+A DFL+G T+MP+SM+R+V
Sbjct: 35 LYIVFGFGAVLAVFGNLLVMISILHFKQLHSPTNFLVASLACADFLVGVTVMPFSMVRTV 94
Query: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
E+CWYFG +FC + D+ +S+FHLC ++IDR+ A+ PL+Y TK T+ V +
Sbjct: 95 ESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFISIDRYIAVTDPLVYPTKFTVSVSGICIS 154
Query: 121 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 180
+ W +P ++ V ++ Y DG+E + C C + N+ W T F++ FF P +M
Sbjct: 155 VSWILPLMYSGAVFYTGVYDDGLEELSDALNCIGGCQTVVNQNWVLTDFLS-FFIPTFIM 213
Query: 181 VGIYGKIFAVSRKHAHAINNLRENQNNQ--------VKKDKKAAKTLGIVIGVFLLCWFP 232
+ +YG IF V+R+ A I N + ++++KAAKTLG+ + F++ W P
Sbjct: 214 IILYGNIFLVARRQAKKIENTGSKTESSSESYKARVARRERKAAKTLGVTVVAFMISWLP 273
Query: 233 CFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSS 292
L+D F+ F TP +++ W Y+NS NPLIY FYPWFR+A+K I+ G++ +
Sbjct: 274 YSIDSLIDAFMGFITPACIYEICCWCAYYNSAMNPLIYALFYPWFRKAIKVIVTGQVLKN 333
>gi|110618256 trace amine associated receptor 9 [Homo sapiens]
Length = 348
Score = 254 bits (650), Expect = 5e-68
Identities = 120/297 (40%), Positives = 177/297 (59%), Gaps = 9/297 (3%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSV 60
+Y+ + + FGNL ++I+I +FKQLHTPTNFLI S+A DFL+G T+MP+S +RSV
Sbjct: 35 LYAVLGFGAVLAAFGNLLVMIAILHFKQLHTPTNFLIASLACADFLVGVTVMPFSTVRSV 94
Query: 61 ENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLL 120
E+CWYFG ++CK + FD S+FHLC +++DR+ A+ PL Y TK T+ V ++
Sbjct: 95 ESCWYFGDSYCKFHTCFDTSFCFASLFHLCCISVDRYIAVTDPLTYPTKFTVSVSGICIV 154
Query: 121 LCWSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMM 180
L W ++F + ++ A +GIE + + C C N+ W F+ FF P M
Sbjct: 155 LSWFFSVTYSFSIFYTGANEEGIEELVVALTCVGGCQAPLNQNWVLLCFLL-FFIPNVAM 213
Query: 181 VGIYGKIFAVSRKHAHAINNLRENQNNQ--------VKKDKKAAKTLGIVIGVFLLCWFP 232
V IY KIF V++ A I + + K+++KAAKTLGI + FL+ W P
Sbjct: 214 VFIYSKIFLVAKHQARKIESTASQAQSSSESYKERVAKRERKAAKTLGIAMAAFLVSWLP 273
Query: 233 CFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKI 289
++D ++NF TP +++ L W Y+NS NPLIY FFY WF +A+K I+ GK+
Sbjct: 274 YLVDAVIDAYMNFITPPYVYEILVWCVYYNSAMNPLIYAFFYQWFGKAIKLIVSGKV 330
>gi|16751917 trace amine associated receptor 8 [Homo sapiens]
Length = 342
Score = 237 bits (604), Expect = 1e-62
Identities = 112/298 (37%), Positives = 178/298 (59%), Gaps = 10/298 (3%)
Query: 3 SFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVEN 62
+F GS+ + +FGNL ++ S+ +FKQLH+PTNFLI S+A DFL+G T+M +SM+R+VE+
Sbjct: 37 AFSFGSL-LAVFGNLLVMTSVLHFKQLHSPTNFLIASLACADFLVGVTVMLFSMVRTVES 95
Query: 63 CWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLC 122
CWYFG FC ++ D+ +S+ HLC + IDR+ + PL+Y+TK T+ V + +
Sbjct: 96 CWYFGAKFCTLHSCCDVAFCYSSVLHLCFICIDRYIVVTDPLVYATKFTVSVSGICISVS 155
Query: 123 WSVPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMMVG 182
W +P ++ V ++ DG+E + C C ++ ++ W F+ FF P +M+
Sbjct: 156 WILPLTYSGAVFYTGVNDDGLEELVSALNCVGGCQIIVSQGWVLIDFLL-FFIPTLVMII 214
Query: 183 IYGKIFAVSRKHAHAINNLRENQNNQ--------VKKDKKAAKTLGIVIGVFLLCWFPCF 234
+Y KIF ++++ A I + K+++KAAKTLG+ + F++ W P
Sbjct: 215 LYSKIFLIAKQQAIKIETTSSKVESSSESYKIRVAKRERKAAKTLGVTVLAFVISWLPYT 274
Query: 235 FTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSS 292
IL+D F+ F TP +++ W Y+NS NPLIY FYPWFR+A+K IL G + +
Sbjct: 275 VDILIDAFMGFLTPAYIYEICCWSAYYNSAMNPLIYALFYPWFRKAIKLILSGDVLKA 332
>gi|94421462 serotonin 5-HT4 receptor isoform n [Homo sapiens]
Length = 359
Score = 190 bits (483), Expect = 1e-48
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 25/308 (8%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAFGVVFSEAYADGIEGYDILV-------ACSSSCPVMFNKLWGTTLFMA 171
L CW +P +F + GI D++ + S+ C M NK + T +
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGI--IDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVV 199
Query: 172 GFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQNNQVKKDKKAAK 217
F+ P +MV Y +I+ +++HAH I L+ ++ ++++ + KAAK
Sbjct: 200 AFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAK 259
Query: 218 TLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWF 277
TL I++G F LCW P F T ++DPF++++ P ++ A W GY NS NP +Y F F
Sbjct: 260 TLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSF 319
Query: 278 RRALKYIL 285
RRA IL
Sbjct: 320 RRAFLIIL 327
>gi|94421460 serotonin 5-HT4 receptor isoform i [Homo sapiens]
Length = 428
Score = 190 bits (483), Expect = 1e-48
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 25/308 (8%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAFGVVFSEAYADGIEGYDILV-------ACSSSCPVMFNKLWGTTLFMA 171
L CW +P +F + GI D++ + S+ C M NK + T +
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGI--IDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVV 199
Query: 172 GFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQNNQVKKDKKAAK 217
F+ P +MV Y +I+ +++HAH I L+ ++ ++++ + KAAK
Sbjct: 200 AFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAK 259
Query: 218 TLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWF 277
TL I++G F LCW P F T ++DPF++++ P ++ A W GY NS NP +Y F F
Sbjct: 260 TLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSF 319
Query: 278 RRALKYIL 285
RRA IL
Sbjct: 320 RRAFLIIL 327
>gi|94421456 serotonin 5-HT4 receptor isoform d [Homo sapiens]
Length = 360
Score = 190 bits (483), Expect = 1e-48
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 25/308 (8%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAFGVVFSEAYADGIEGYDILV-------ACSSSCPVMFNKLWGTTLFMA 171
L CW +P +F + GI D++ + S+ C M NK + T +
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGI--IDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVV 199
Query: 172 GFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQNNQVKKDKKAAK 217
F+ P +MV Y +I+ +++HAH I L+ ++ ++++ + KAAK
Sbjct: 200 AFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAK 259
Query: 218 TLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWF 277
TL I++G F LCW P F T ++DPF++++ P ++ A W GY NS NP +Y F F
Sbjct: 260 TLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSF 319
Query: 278 RRALKYIL 285
RRA IL
Sbjct: 320 RRAFLIIL 327
>gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens]
Length = 387
Score = 190 bits (483), Expect = 1e-48
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 25/308 (8%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAFGVVFSEAYADGIEGYDILV-------ACSSSCPVMFNKLWGTTLFMA 171
L CW +P +F + GI D++ + S+ C M NK + T +
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGI--IDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVV 199
Query: 172 GFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQNNQVKKDKKAAK 217
F+ P +MV Y +I+ +++HAH I L+ ++ ++++ + KAAK
Sbjct: 200 AFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAK 259
Query: 218 TLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWF 277
TL I++G F LCW P F T ++DPF++++ P ++ A W GY NS NP +Y F F
Sbjct: 260 TLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSF 319
Query: 278 RRALKYIL 285
RRA IL
Sbjct: 320 RRAFLIIL 327
>gi|41282074 serotonin 5-HT4 receptor isoform g [Homo sapiens]
Length = 378
Score = 190 bits (483), Expect = 1e-48
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 25/308 (8%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAFGVVFSEAYADGIEGYDILV-------ACSSSCPVMFNKLWGTTLFMA 171
L CW +P +F + GI D++ + S+ C M NK + T +
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGI--IDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVV 199
Query: 172 GFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQNNQVKKDKKAAK 217
F+ P +MV Y +I+ +++HAH I L+ ++ ++++ + KAAK
Sbjct: 200 AFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAK 259
Query: 218 TLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWF 277
TL I++G F LCW P F T ++DPF++++ P ++ A W GY NS NP +Y F F
Sbjct: 260 TLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSF 319
Query: 278 RRALKYIL 285
RRA IL
Sbjct: 320 RRAFLIIL 327
>gi|11321563 serotonin 5-HT4 receptor isoform b [Homo sapiens]
Length = 388
Score = 190 bits (483), Expect = 1e-48
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 25/308 (8%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAFGVVFSEAYADGIEGYDILV-------ACSSSCPVMFNKLWGTTLFMA 171
L CW +P +F + GI D++ + S+ C M NK + T +
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGI--IDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVV 199
Query: 172 GFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQNNQVKKDKKAAK 217
F+ P +MV Y +I+ +++HAH I L+ ++ ++++ + KAAK
Sbjct: 200 AFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAK 259
Query: 218 TLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWF 277
TL I++G F LCW P F T ++DPF++++ P ++ A W GY NS NP +Y F F
Sbjct: 260 TLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSF 319
Query: 278 RRALKYIL 285
RRA IL
Sbjct: 320 RRAFLIIL 327
>gi|94421458 serotonin 5-HT4 receptor isoform hb [Homo sapiens]
Length = 402
Score = 189 bits (479), Expect = 3e-48
Identities = 105/320 (32%), Positives = 172/320 (53%), Gaps = 35/320 (10%)
Query: 1 MYSFMAGSIFITIFGNLAMIISISYFKQLHT-PTNFLILSMAITDFLLGFTIMPYSMIRS 59
+ +F++ I + I GNL +++++ + +QL TN+ I+S+A D L+ +MP+ I
Sbjct: 22 LLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIEL 81
Query: 60 VENCWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAIC-YPLLYSTKITIPVIKRL 118
V++ W +G FC + S D++L+ SIFHLC +++DR+YAIC PL+Y K+T I +
Sbjct: 82 VQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALM 141
Query: 119 LLLCWSVPGAFAF----------GVVFSEAYADGIEGYDILV---------ACSSSCPVM 159
L CW +P +F G++ E + G D + S+ C M
Sbjct: 142 LGGCWVIPTFISFLPIMQGWNNIGIIDLERSLNQGLGQDFHAIEKRKFNQNSNSTYCVFM 201
Query: 160 FNKLWGTTLFMAGFFTPGSMMVGIYGKIFAVSRKHAHAINNLR--------------ENQ 205
NK + T + F+ P +MV Y +I+ +++HAH I L+ ++
Sbjct: 202 VNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHS 261
Query: 206 NNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTC 265
++++ + KAAKTL I++G F LCW P F T ++DPF++++ P ++ A W GY NS
Sbjct: 262 THRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGL 321
Query: 266 NPLIYGFFYPWFRRALKYIL 285
NP +Y F FRRA IL
Sbjct: 322 NPFLYAFLNKSFRRAFLIIL 341
>gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens]
Length = 455
Score = 144 bits (364), Expect = 7e-35
Identities = 89/319 (27%), Positives = 153/319 (47%), Gaps = 48/319 (15%)
Query: 5 MAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCW 64
+ G I + GN+ +I+S++ + LH+ T++ I+++A+ D LL T++P+S I V W
Sbjct: 33 LGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGYW 92
Query: 65 YFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWS 124
FG FC I+ + D++ SI LC ++IDR+ + YPL Y T +T LL W+
Sbjct: 93 AFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWA 152
Query: 125 VPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMA--GFFTPGSMMVG 182
+ + G +F A N+ G LF A F+ P ++++
Sbjct: 153 LSLVISIGPLFGWRQP----------APEDETICQINEEPGYVLFSALGSFYLPLAIILV 202
Query: 183 IYGKIFAVSRKHAHAINN-------------LRENQNN---------------------- 207
+Y +++ V+++ + + + LR ++ N
Sbjct: 203 MYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLL 262
Query: 208 QVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFL-NFSTPVVLFDALTWFGYFNSTCN 266
+ ++KKAAKTLGIV+G F+LCW P F + + F +F +F + W GY NS N
Sbjct: 263 KFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCIN 322
Query: 267 PLIYGFFYPWFRRALKYIL 285
P+IY F++A + +L
Sbjct: 323 PIIYPCSSQEFKKAFQNVL 341
>gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens]
Length = 466
Score = 144 bits (364), Expect = 7e-35
Identities = 89/319 (27%), Positives = 153/319 (47%), Gaps = 48/319 (15%)
Query: 5 MAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCW 64
+ G I + GN+ +I+S++ + LH+ T++ I+++A+ D LL T++P+S I V W
Sbjct: 33 LGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGYW 92
Query: 65 YFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWS 124
FG FC I+ + D++ SI LC ++IDR+ + YPL Y T +T LL W+
Sbjct: 93 AFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWA 152
Query: 125 VPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMA--GFFTPGSMMVG 182
+ + G +F A N+ G LF A F+ P ++++
Sbjct: 153 LSLVISIGPLFGWRQP----------APEDETICQINEEPGYVLFSALGSFYLPLAIILV 202
Query: 183 IYGKIFAVSRKHAHAINN-------------LRENQNN---------------------- 207
+Y +++ V+++ + + + LR ++ N
Sbjct: 203 MYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLL 262
Query: 208 QVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFL-NFSTPVVLFDALTWFGYFNSTCN 266
+ ++KKAAKTLGIV+G F+LCW P F + + F +F +F + W GY NS N
Sbjct: 263 KFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCIN 322
Query: 267 PLIYGFFYPWFRRALKYIL 285
P+IY F++A + +L
Sbjct: 323 PIIYPCSSQEFKKAFQNVL 341
>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
Length = 475
Score = 144 bits (364), Expect = 7e-35
Identities = 89/319 (27%), Positives = 153/319 (47%), Gaps = 48/319 (15%)
Query: 5 MAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCW 64
+ G I + GN+ +I+S++ + LH+ T++ I+++A+ D LL T++P+S I V W
Sbjct: 33 LGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGYW 92
Query: 65 YFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWS 124
FG FC I+ + D++ SI LC ++IDR+ + YPL Y T +T LL W+
Sbjct: 93 AFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWA 152
Query: 125 VPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMA--GFFTPGSMMVG 182
+ + G +F A N+ G LF A F+ P ++++
Sbjct: 153 LSLVISIGPLFGWRQP----------APEDETICQINEEPGYVLFSALGSFYLPLAIILV 202
Query: 183 IYGKIFAVSRKHAHAINN-------------LRENQNN---------------------- 207
+Y +++ V+++ + + + LR ++ N
Sbjct: 203 MYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLL 262
Query: 208 QVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFL-NFSTPVVLFDALTWFGYFNSTCN 266
+ ++KKAAKTLGIV+G F+LCW P F + + F +F +F + W GY NS N
Sbjct: 263 KFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCIN 322
Query: 267 PLIYGFFYPWFRRALKYIL 285
P+IY F++A + +L
Sbjct: 323 PIIYPCSSQEFKKAFQNVL 341
>gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens]
Length = 429
Score = 144 bits (364), Expect = 7e-35
Identities = 89/319 (27%), Positives = 153/319 (47%), Gaps = 48/319 (15%)
Query: 5 MAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCW 64
+ G I + GN+ +I+S++ + LH+ T++ I+++A+ D LL T++P+S I V W
Sbjct: 33 LGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTSTVLPFSAIFEVLGYW 92
Query: 65 YFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWS 124
FG FC I+ + D++ SI LC ++IDR+ + YPL Y T +T LL W+
Sbjct: 93 AFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWA 152
Query: 125 VPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMA--GFFTPGSMMVG 182
+ + G +F A N+ G LF A F+ P ++++
Sbjct: 153 LSLVISIGPLFGWRQP----------APEDETICQINEEPGYVLFSALGSFYLPLAIILV 202
Query: 183 IYGKIFAVSRKHAHAINN-------------LRENQNN---------------------- 207
+Y +++ V+++ + + + LR ++ N
Sbjct: 203 MYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVRLL 262
Query: 208 QVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFL-NFSTPVVLFDALTWFGYFNSTCN 266
+ ++KKAAKTLGIV+G F+LCW P F + + F +F +F + W GY NS N
Sbjct: 263 KFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCIN 322
Query: 267 PLIYGFFYPWFRRALKYIL 285
P+IY F++A + +L
Sbjct: 323 PIIYPCSSQEFKKAFQNVL 341
>gi|197085610 histamine receptor H2 isoform 1 [Homo sapiens]
Length = 397
Score = 144 bits (364), Expect = 7e-35
Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 10/299 (3%)
Query: 5 MAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCW 64
+A I IT+ GN+ + +++ ++L TN I+S+AITD LLG ++P+S I + W
Sbjct: 25 LAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSLAITDLLLGLLVLPFSAIYQLSCKW 84
Query: 65 YFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWS 124
FG FC IY S D+ML SI +L +++DR+ A+ PL Y +T + L+L W
Sbjct: 85 SFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRVAISLVLIWV 144
Query: 125 VPGAFAFGVVFS--EAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMMVG 182
+ +F + + + +G +S C V N+++G + F+ P +M
Sbjct: 145 ISITLSFLSIHLGWNSRNETSKGNH----TTSKCKVQVNEVYGLVDGLVTFYLPLLIMCI 200
Query: 183 IYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPF 242
Y +IF V+R A IN++ + + ++ KA TL V+G F++CWFP +FT +
Sbjct: 201 TYYRIFKVARDQAKRINHISSWKAATI-REHKATVTLAAVMGAFIICWFP-YFTAFVYRG 258
Query: 243 LNFSTPV--VLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTIL 299
L + VL + W GY NS NP++Y FR + + ++ + H T L
Sbjct: 259 LRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANRNSHKTSL 317
>gi|13435405 histamine receptor H2 isoform 2 [Homo sapiens]
Length = 359
Score = 144 bits (364), Expect = 7e-35
Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 10/299 (3%)
Query: 5 MAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCW 64
+A I IT+ GN+ + +++ ++L TN I+S+AITD LLG ++P+S I + W
Sbjct: 25 LAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSLAITDLLLGLLVLPFSAIYQLSCKW 84
Query: 65 YFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWS 124
FG FC IY S D+ML SI +L +++DR+ A+ PL Y +T + L+L W
Sbjct: 85 SFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRVAISLVLIWV 144
Query: 125 VPGAFAFGVVFS--EAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMMVG 182
+ +F + + + +G +S C V N+++G + F+ P +M
Sbjct: 145 ISITLSFLSIHLGWNSRNETSKGNH----TTSKCKVQVNEVYGLVDGLVTFYLPLLIMCI 200
Query: 183 IYGKIFAVSRKHAHAINNLRENQNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPF 242
Y +IF V+R A IN++ + + ++ KA TL V+G F++CWFP +FT +
Sbjct: 201 TYYRIFKVARDQAKRINHISSWKAATI-REHKATVTLAAVMGAFIICWFP-YFTAFVYRG 258
Query: 243 LNFSTPV--VLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYILLGKIFSSCFHNTIL 299
L + VL + W GY NS NP++Y FR + + ++ + H T L
Sbjct: 259 LRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANRNSHKTSL 317
>gi|4501959 alpha-1B-adrenergic receptor [Homo sapiens]
Length = 520
Score = 144 bits (362), Expect = 1e-34
Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 47/316 (14%)
Query: 9 IFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGL 68
I I GN+ +I+S++ + L TPTN+ I+++A+ D LL FT++P+S V W G
Sbjct: 56 ILFAIVGNILVILSVACNRHLRTPTNYFIVNLAMADLLLSFTVLPFSAALEVLGYWVLGR 115
Query: 69 TFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSVPGA 128
FC I+ + D++ SI LC+++IDR+ + Y L Y T +T LL W +
Sbjct: 116 IFCDIWAAVDVLCCTASILSLCAISIDRYIGVRYSLQYPTLVTRRKAILALLSVWVLSTV 175
Query: 129 FAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMMVGIYGKIF 188
+ G + + + D C V + + F+ P ++++ +Y +++
Sbjct: 176 ISIGPLL--GWKEPAPNDD------KECGVTEEPFYALFSSLGSFYIPLAVILVMYCRVY 227
Query: 189 AVSRK----------------------------HAHAINNLRENQNN----------QVK 210
V+++ H +++ + +N +
Sbjct: 228 IVAKRTTKNLEAGVMKEMSNSKELTLRIHSKNFHEDTLSSTKAKGHNPRSSIAVKLFKFS 287
Query: 211 KDKKAAKTLGIVIGVFLLCWFPCFFTILLDP-FLNFSTPVVLFDALTWFGYFNSTCNPLI 269
++KKAAKTLGIV+G+F+LCW P F + L F P +F + W GYFNS NP+I
Sbjct: 288 REKKAAKTLGIVVGMFILCWLPFFIALPLGSLFSTLKPPDAVFKVVFWLGYFNSCLNPII 347
Query: 270 YGFFYPWFRRALKYIL 285
Y F+RA IL
Sbjct: 348 YPCSSKEFKRAFVRIL 363
>gi|4504535 5-hydroxytryptamine (serotonin) receptor 1D [Homo
sapiens]
Length = 377
Score = 140 bits (352), Expect = 2e-33
Identities = 93/327 (28%), Positives = 148/327 (45%), Gaps = 60/327 (18%)
Query: 12 TIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGLTFC 71
T+ N ++ +I ++LHTP N+LI S+A TD L+ +MP S+ ++ + W FG C
Sbjct: 52 TVLSNAFVLTTILLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILC 111
Query: 72 KIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSVPGAFAF 131
I+ S D+ SI HLC +A+DR++AI L YS + T ++ + W++ +
Sbjct: 112 DIWLSSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISI 171
Query: 132 GVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMMVGIYGKIFAVS 191
+F E D LV S +++ F+ P +++ +YG+I+ +
Sbjct: 172 PPLFWRQAKAQEEMSDCLVNTSQISYTIYST-------CGAFYIPSVLLIILYGRIYRAA 224
Query: 192 RKH--------------AHAI------------NNLRENQN---------NQVK------ 210
R AH I ++L E + N VK
Sbjct: 225 RNRILNPPSLYGKRFTTAHLITGSAGSSLCSLNSSLHEGHSHSAGSPLFFNHVKIKLADS 284
Query: 211 ----------KDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFLNFSTPV--VLFDALTWF 258
+++KA K LGI++G F++CW P F L+ P S + LFD TW
Sbjct: 285 ALERKRISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWL 344
Query: 259 GYFNSTCNPLIYGFFYPWFRRALKYIL 285
GY NS NP+IY F FR+A + I+
Sbjct: 345 GYLNSLINPIIYTVFNEEFRQAFQKIV 371
>gi|4501969 adrenergic, beta-2-, receptor, surface [Homo sapiens]
Length = 413
Score = 137 bits (346), Expect = 9e-33
Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 22/298 (7%)
Query: 9 IFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGL 68
+ +FGN+ +I +I+ F++L T TN+ I S+A D ++G ++P+ + W FG
Sbjct: 44 VLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGN 103
Query: 69 TFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSVPGA 128
+C+ + S D++ SI LC +A+DR++AI P Y + +T + ++L+ W V G
Sbjct: 104 FWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGL 163
Query: 129 FAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFTPGSMMVGIYGKIF 188
+F + Y + A + C N+ + + F+ P +MV +Y ++F
Sbjct: 164 TSFLPIQMHWYRATHQEAINCYANETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVF 223
Query: 189 AVSRKHAHAINNLREN---QN-NQVK-----------------KDKKAAKTLGIVIGVFL 227
+++ I+ QN +QV+ K+ KA KTLGI++G F
Sbjct: 224 QEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFT 283
Query: 228 LCWFPCFFTILLDPFLNFSTPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALKYIL 285
LCW P F ++ + ++ L W GY NS NPLIY P FR A + +L
Sbjct: 284 LCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIY-CRSPDFRIAFQELL 340
>gi|4503383 dopamine receptor D1 [Homo sapiens]
Length = 446
Score = 136 bits (342), Expect = 3e-32
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 43/321 (13%)
Query: 4 FMAGSIFITIFGNLAMIISISYFKQLHTP-TNFLILSMAITDFLLGFTIMPYSMIRSVEN 62
F++ I T+ GN + ++ F+ L + TNF ++S+A++D L+ +MP+ + +
Sbjct: 29 FLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAG 88
Query: 63 CWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLC 122
W FG +FC I+ +FD+M S SI +LC +++DR++AI P Y K+T L+ +
Sbjct: 89 FWPFG-SFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVA 147
Query: 123 WS-------VPGAFAFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAGFFT 175
W+ +P ++ + +DG L +C ++ + + + F+
Sbjct: 148 WTLSVLISFIPVQLSWHKAKPTSPSDG--NATSLAETIDNCDSSLSRTYAISSSVISFYI 205
Query: 176 PGSMMVGIYGKIFAVSRKH-----------AHAINNLRENQNNQ--------------VK 210
P ++M+ Y +I+ +++K HA N N + K
Sbjct: 206 PVAIMIVTYTRIYRIAQKQIRRIAALERAAVHAKNCQTTTGNGKPVECSQPESSFKMSFK 265
Query: 211 KDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFLN------FSTPVVLFDALTWFGYFNST 264
++ K KTL +++GVF+ CW P F + PF F FD WFG+ NS+
Sbjct: 266 RETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSNTFDVFVWFGWANSS 325
Query: 265 CNPLIYGFFYPWFRRALKYIL 285
NP+IY F FR+A +L
Sbjct: 326 LNPIIYAFNAD-FRKAFSTLL 345
>gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens]
Length = 432
Score = 130 bits (327), Expect = 1e-30
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 53/317 (16%)
Query: 11 ITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPY-SMIRSVENCWYFGLT 69
+TI GN ++IS+ + K+L P+N+LI+S+A+ D + +MP+ S+ + W FG
Sbjct: 94 LTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIFGHF 153
Query: 70 FCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSVPGAF 129
FC ++ + D+M SI LC ++IDR+ I PL Y + + +++L W + +
Sbjct: 154 FCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI 213
Query: 130 AFGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLF--MAGFFTPGSMMVGIYGKI 187
+F +A + + + ++ +G T++ F+ P S+M+ +Y +I
Sbjct: 214 TLPPLF--GWAQNVNDDKV---------CLISQDFGYTIYSTAVAFYIPMSVMLFMYYQI 262
Query: 188 FAVSRKHAH----------------AINNL------------------RENQNNQV-KKD 212
+ +RK A A+N + E +N + K++
Sbjct: 263 YKAARKSAAKHKFPGFPRVEPDSVIALNGIVKLQKEVEECANLSRLLKHERKNISIFKRE 322
Query: 213 KKAAKTLGIVIGVFLLCWFPCFFTILLDPFLNFST----PVVLFDALTWFGYFNSTCNPL 268
+KAA TLGI++G F +CW P F PF+ ++ P+ + W GY NS NP
Sbjct: 323 QKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTFLWLGYANSLINPF 382
Query: 269 IYGFFYPWFRRALKYIL 285
IY FF R + +L
Sbjct: 383 IYAFFNRDLRTTYRSLL 399
>gi|4504537 5-hydroxytryptamine (serotonin) receptor 1E [Homo
sapiens]
Length = 365
Score = 125 bits (313), Expect = 6e-29
Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 64/332 (19%)
Query: 11 ITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGLTF 70
+T NLA+I++I K+LH P N+LI S+A+TD L+ +MP S+I V + W G
Sbjct: 35 LTTLLNLAVIMAIGTTKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFL 94
Query: 71 CKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSVPGAFA 130
C+++ S D+ SI HLC +A+DR++AI + Y+ K T ++L W++ +
Sbjct: 95 CEVWLSVDMTCCTCSILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFIS 154
Query: 131 FGVVFSEAYADGIEGYDILVACSSSCPVMFNKLWGTTLFMAG-FFTPGSMMVGIYGKIFA 189
+F ++ L S C + + + T G F+ P ++++ +Y +I+
Sbjct: 155 MPPLFWRSHRR-------LSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYH 207
Query: 190 VSR-------KHAHAINNLRENQNN----------------------------------- 207
++ H N ++QN+
Sbjct: 208 AAKSLYQKRGSSRHLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPP 267
Query: 208 --------------QVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFLNFSTPVVLFD 253
+++KAA+ LG+++G F+L W P F L+ ++ + D
Sbjct: 268 FDNDLDHPGERQQISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVAD 327
Query: 254 ALTWFGYFNSTCNPLIYGFFYPWFRRALKYIL 285
LTW GY NS NPL+Y F F+ A K ++
Sbjct: 328 FLTWLGYVNSLINPLLYTSFNEDFKLAFKKLI 359
>gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens]
Length = 408
Score = 121 bits (303), Expect = 9e-28
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 42/322 (13%)
Query: 3 SFMAGSIFITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVEN 62
+ +A ++ T+ GNL +I++I++ +L T TN + S+A D ++G ++P + ++
Sbjct: 42 ALLALAVLATVGGNLLVIVAIAWTPRLQTMTNVFVTSLAAADLVMGLLVVPPAATLALTG 101
Query: 63 CWYFGLTFCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLC 122
W G T C+++ S D++ SI LC++A+DR+ A+ PL Y +T + ++L
Sbjct: 102 HWPLGATGCELWTSVDVLCVTASIETLCALAVDRYLAVTNPLRYGALVTKRCARTAVVLV 161
Query: 123 WSVPGAFAFGVVFSEAYADGIEGYDILVACSSS---CPVMFNKLWGTTLFMAGFFTPGSM 179
W V A +F + S+ + G + C S+ C N + F+ P +
Sbjct: 162 WVVSAAVSFAPIMSQWWRVGADAE--AQRCHSNPRCCAFASNMPYVLLSSSVSFYLPLLV 219
Query: 180 MVGIYGKIFAVSRKHAHAINNL-----------------------------------REN 204
M+ +Y ++F V+ + + R
Sbjct: 220 MLFVYARVFVVATRQLRLLRGELGRFPPEESPPAPSRSLAPAPVGTCAPPEGVPACGRRP 279
Query: 205 QNNQVKKDKKAAKTLGIVIGVFLLCWFPCFFTILLDPFLNFS-TPVVLFDALTWFGYFNS 263
++ +A TLG+++G F LCW P F +L S P F AL W GY NS
Sbjct: 280 ARLLPLREHRALCTLGLIMGTFTLCWLPFFLANVLRALGGPSLVPGPAFLALNWLGYANS 339
Query: 264 TCNPLIYGFFYPWFRRALKYIL 285
NPLIY P FR A + +L
Sbjct: 340 AFNPLIY-CRSPDFRSAFRRLL 360
>gi|16604258 neuropeptide FF receptor 2 isoform 2 [Homo sapiens]
Length = 420
Score = 119 bits (297), Expect = 4e-27
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 10 FITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGLT 69
F+ + GN + + K +HT TN IL++AI+D L+G MP +++ ++ W FG T
Sbjct: 57 FLCMMGNTVVCFIVMRNKHMHTVTNLFILNLAISDLLVGIFCMPITLLDNIIAGWPFGNT 116
Query: 70 FCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSV---- 125
CKI + S+F L ++A+DRF + YP + K+TI ++++ W +
Sbjct: 117 MCKISGLVQGISVAASVFTLVAIAVDRFQCVVYP--FKPKLTIKTAFVIIMIIWVLAITI 174
Query: 126 --PGAFAFGVVFSEAYADGIEGYD---ILVACSSSCPVM-FNKLWGTTLFMAGFFTPGSM 179
P A V + Y + + + C P K++ T LF + P S+
Sbjct: 175 MSPSAVMLHVQEEKYYRVRLNSQNKTSPVYWCREDWPNQEMRKIYTTVLFANIYLAPLSL 234
Query: 180 MVGIYGKIFAVSRKHAHAINNLRENQNN---QVKKDKKAAKTLGIVIGVFLLCWFPCFFT 236
+V +YG+I +S A + R+NQ +K +K K L IV +F+L W P +
Sbjct: 235 IVIMYGRI-GISLFRAAVPHTGRKNQEQWHVVSRKKQKIIKMLLIVALLFILSWLPLWTL 293
Query: 237 ILLDPFLNFS------TPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALK 282
++L + + S + ++ W + NS+ NP+IYGFF FRR +
Sbjct: 294 MMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSVNPIIYGFFNENFRRGFQ 345
>gi|221316654 neuropeptide FF receptor 2 isoform 1 [Homo sapiens]
Length = 522
Score = 119 bits (297), Expect = 4e-27
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 10 FITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGLT 69
F+ + GN + + K +HT TN IL++AI+D L+G MP +++ ++ W FG T
Sbjct: 159 FLCMMGNTVVCFIVMRNKHMHTVTNLFILNLAISDLLVGIFCMPITLLDNIIAGWPFGNT 218
Query: 70 FCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSV---- 125
CKI + S+F L ++A+DRF + YP + K+TI ++++ W +
Sbjct: 219 MCKISGLVQGISVAASVFTLVAIAVDRFQCVVYP--FKPKLTIKTAFVIIMIIWVLAITI 276
Query: 126 --PGAFAFGVVFSEAYADGIEGYD---ILVACSSSCPVM-FNKLWGTTLFMAGFFTPGSM 179
P A V + Y + + + C P K++ T LF + P S+
Sbjct: 277 MSPSAVMLHVQEEKYYRVRLNSQNKTSPVYWCREDWPNQEMRKIYTTVLFANIYLAPLSL 336
Query: 180 MVGIYGKIFAVSRKHAHAINNLRENQNN---QVKKDKKAAKTLGIVIGVFLLCWFPCFFT 236
+V +YG+I +S A + R+NQ +K +K K L IV +F+L W P +
Sbjct: 337 IVIMYGRI-GISLFRAAVPHTGRKNQEQWHVVSRKKQKIIKMLLIVALLFILSWLPLWTL 395
Query: 237 ILLDPFLNFS------TPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALK 282
++L + + S + ++ W + NS+ NP+IYGFF FRR +
Sbjct: 396 MMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSVNPIIYGFFNENFRRGFQ 447
>gi|221316652 neuropeptide FF receptor 2 isoform 3 [Homo sapiens]
Length = 423
Score = 119 bits (297), Expect = 4e-27
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 10 FITIFGNLAMIISISYFKQLHTPTNFLILSMAITDFLLGFTIMPYSMIRSVENCWYFGLT 69
F+ + GN + + K +HT TN IL++AI+D L+G MP +++ ++ W FG T
Sbjct: 60 FLCMMGNTVVCFIVMRNKHMHTVTNLFILNLAISDLLVGIFCMPITLLDNIIAGWPFGNT 119
Query: 70 FCKIYYSFDLMLSITSIFHLCSVAIDRFYAICYPLLYSTKITIPVIKRLLLLCWSV---- 125
CKI + S+F L ++A+DRF + YP + K+TI ++++ W +
Sbjct: 120 MCKISGLVQGISVAASVFTLVAIAVDRFQCVVYP--FKPKLTIKTAFVIIMIIWVLAITI 177
Query: 126 --PGAFAFGVVFSEAYADGIEGYD---ILVACSSSCPVM-FNKLWGTTLFMAGFFTPGSM 179
P A V + Y + + + C P K++ T LF + P S+
Sbjct: 178 MSPSAVMLHVQEEKYYRVRLNSQNKTSPVYWCREDWPNQEMRKIYTTVLFANIYLAPLSL 237
Query: 180 MVGIYGKIFAVSRKHAHAINNLRENQNN---QVKKDKKAAKTLGIVIGVFLLCWFPCFFT 236
+V +YG+I +S A + R+NQ +K +K K L IV +F+L W P +
Sbjct: 238 IVIMYGRI-GISLFRAAVPHTGRKNQEQWHVVSRKKQKIIKMLLIVALLFILSWLPLWTL 296
Query: 237 ILLDPFLNFS------TPVVLFDALTWFGYFNSTCNPLIYGFFYPWFRRALK 282
++L + + S + ++ W + NS+ NP+IYGFF FRR +
Sbjct: 297 MMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSVNPIIYGFFNENFRRGFQ 348
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.333 0.145 0.477
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,508,899
Number of Sequences: 37866
Number of extensions: 419969
Number of successful extensions: 3007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 1513
Number of HSP's gapped (non-prelim): 934
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.