BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo sapiens] (364 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo sa... 756 0.0 gi|74229015 2',5'-oligoadenylate synthetase 1 isoform 3 [Homo sa... 720 0.0 gi|74229013 2',5'-oligoadenylate synthetase 1 isoform 1 [Homo sa... 719 0.0 gi|45007007 2'-5'oligoadenylate synthetase 3 [Homo sapiens] 389 e-108 gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo sa... 369 e-102 gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo sa... 368 e-102 gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo... 240 1e-63 gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b [Homo... 131 8e-31 gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo sa... 73 3e-13 gi|24234747 interleukin enhancer binding factor 2 [Homo sapiens] 31 1.5 gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo... 29 7.6 gi|14719835 NLR family, pyrin domain containing 1 isoform 4 [Hom... 29 7.6 gi|14719833 NLR family, pyrin domain containing 1 isoform 3 [Hom... 29 7.6 gi|14719829 NLR family, pyrin domain containing 1 isoform 1 [Hom... 29 7.6 gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens] 29 7.6 gi|189458896 postmeiotic segregation 1 isoform b [Homo sapiens] 29 7.6 gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens] 29 7.6 gi|62750354 matrin 3 [Homo sapiens] 29 7.6 gi|21626466 matrin 3 [Homo sapiens] 29 7.6 gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 28 9.9 gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 28 9.9 gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 28 9.9 gi|41349491 protein phosphatase 2, regulatory subunit B'', beta ... 28 9.9 >gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo sapiens] Length = 364 Score = 756 bits (1951), Expect = 0.0 Identities = 364/364 (100%), Positives = 364/364 (100%) Query: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK 60 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK Sbjct: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK 60 Query: 61 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE 120 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE Sbjct: 61 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE 120 Query: 121 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL 180 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL Sbjct: 121 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL 180 Query: 181 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW 240 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW Sbjct: 181 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW 240 Query: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD Sbjct: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 Query: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRPPASSLPFIPAP 360 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRPPASSLPFIPAP Sbjct: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRPPASSLPFIPAP 360 Query: 361 LHEA 364 LHEA Sbjct: 361 LHEA 364 >gi|74229015 2',5'-oligoadenylate synthetase 1 isoform 3 [Homo sapiens] Length = 414 Score = 720 bits (1859), Expect = 0.0 Identities = 347/354 (98%), Positives = 349/354 (98%) Query: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK 60 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK Sbjct: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK 60 Query: 61 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE 120 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE Sbjct: 61 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE 120 Query: 121 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL 180 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL Sbjct: 121 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL 180 Query: 181 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW 240 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW Sbjct: 181 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW 240 Query: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD Sbjct: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 Query: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRPPASSL 354 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILL + S+ Sbjct: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLTQHTPGSI 354 >gi|74229013 2',5'-oligoadenylate synthetase 1 isoform 1 [Homo sapiens] Length = 400 Score = 719 bits (1856), Expect = 0.0 Identities = 346/346 (100%), Positives = 346/346 (100%) Query: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK 60 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK Sbjct: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVK 60 Query: 61 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE 120 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE Sbjct: 61 GGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFE 120 Query: 121 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL 180 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL Sbjct: 121 VQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDL 180 Query: 181 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW 240 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW Sbjct: 181 QKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYAW 240 Query: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD Sbjct: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 Query: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILL 346 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILL Sbjct: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILL 346 >gi|45007007 2'-5'oligoadenylate synthetase 3 [Homo sapiens] Length = 1087 Score = 389 bits (999), Expect = e-108 Identities = 206/344 (59%), Positives = 243/344 (70%), Gaps = 13/344 (3%) Query: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63 L TPA LDKFI ++L P+ F Q+N A+D IC FLKE CFR S P+ V KVVKGGS Sbjct: 747 LYQTPAGDLDKFISEFLQPNRQFLAQVNKAVDTICSFLKENCFRNS--PIKVIKVVKGGS 804 Query: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123 S KGT LRGRSDADLVVFLS + F +Q N+R E I EIR QLEACQ+ER F VKFEV Sbjct: 805 SAKGTALRGRSDADLVVFLSCFSQFTEQGNKRAEIISEIRAQLEACQQERQFEVKFEVS- 863 Query: 124 PRWGNPRALSFVLSS-LQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDLQK 182 +W NPR LSF L+S L + V+FDVLPAFDALGQL G +P+ Q+YV LI ++ Sbjct: 864 -KWENPRVLSFSLTSQTMLDQSVDFDVLPAFDALGQLVSGSRPSSQVYVDLIHSYSNA-- 920 Query: 183 EGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNC---KKKLGKLPPQYALELLTVYA 239 GE+STCFTELQRDF+ RPTKLKSLIRLVKHWYQ C K G LPPQ+ LELLTVYA Sbjct: 921 -GEYSTCFTELQRDFIISRPTKLKSLIRLVKHWYQQCTKISKGRGSLPPQHGLELLTVYA 979 Query: 240 WERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVIL 299 WE+G + FN A+GFRTVLELV Y+QLCIYWT Y+ K+ + +L++QL KPRP+IL Sbjct: 980 WEQGGKDSQFNMAEGFRTVLELVTQYRQLCIYWTINYNAKDKTVGDFLKQQLQKPRPIIL 1039 Query: 300 DPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSW 343 DPADPTGNLG W LA+EA A + C +G P+ W Sbjct: 1040 DPADPTGNLGHN--ARWDLLAKEAAACTSALCCMGRNGIPIQPW 1081 Score = 297 bits (760), Expect = 1e-80 Identities = 170/364 (46%), Positives = 222/364 (60%), Gaps = 25/364 (6%) Query: 2 MDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKG 61 +DL P K LD+FI+D+L P F+ Q+ AIDII L E C +S +V KG Sbjct: 406 LDLSQIPTKELDRFIQDHLKPSPQFQEQVKKAIDIILRCLHENCVHKAS------RVSKG 459 Query: 62 GSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEV 121 GS G+GT LR D +L++FL+ T ++DQ RR E + E+R QLE+ +++ S+ + Sbjct: 460 GSFGRGTDLRDGCDVELIIFLNCFTDYKDQGPRRAEILDEMRAQLESWWQDQVPSLS--L 517 Query: 122 QAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDLQ 181 Q P P AL F L S L + +LPAFDA+GQL+ G KPNPQ+Y +L+ T Sbjct: 518 QFPEQNVPEALQFQLVSTALKSWTDVSLLPAFDAVGQLSSGTKPNPQVYSRLL---TSGC 574 Query: 182 KEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWY-QNCKKKLGK------LPPQYALEL 234 +EGE CF EL+R+F+ RP KLK+LI LVKHWY Q + GK LPP YALEL Sbjct: 575 QEGEHKACFAELRRNFMNIRPVKLKNLILLVKHWYRQVAAQNKGKGPAPASLPPAYALEL 634 Query: 235 LTVYAWERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKP 294 LT++AWE+G + FN AQGFRTVL LV +QQLC+YWT Y ++P + +L QL KP Sbjct: 635 LTIFAWEQGCRQDCFNMAQGFRTVLGLVQQHQQLCVYWTVNYSTEDPAMRMHLLGQLRKP 694 Query: 295 RPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSW----ILLVRPP 350 RP++LDPADPT N+G G W LAQEA A CF + DG+ V W LL + P Sbjct: 695 RPLVLDPADPTWNVGHG---SWELLAQEAAALGMQACFLSRDGTSVQPWDVMPALLYQTP 751 Query: 351 ASSL 354 A L Sbjct: 752 AGDL 755 Score = 283 bits (724), Expect = 2e-76 Identities = 155/345 (44%), Positives = 214/345 (62%), Gaps = 8/345 (2%) Query: 2 MDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKG 61 MDL +TPA +LD+F+ L P F + A+ + L+ER R + V K VKG Sbjct: 1 MDLYSTPAAALDRFVARRLQPRKEFVEKARRALGALAAALRERGGRLGAAAPRVLKTVKG 60 Query: 62 GSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEV 121 GSSG+GT L+G D++LV+FL ++ DQ RR E + E+R LE+ + ++ Sbjct: 61 GSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTF 120 Query: 122 QAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDLQ 181 P P AL F L+S+ L + ++ ++PAF+ LGQ G KP PQ+Y L+ Sbjct: 121 --PEQSVPGALQFRLTSVDLEDWMDVSLVPAFNVLGQAGSGVKPKPQVYSTLLNSGC--- 175 Query: 182 KEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWY-QNCKKKLGK--LPPQYALELLTVY 238 + GE + CFTEL+R+F+ RP KLK+LI LVKHWY Q C + L K LPP YALELLT++ Sbjct: 176 QGGEHAACFTELRRNFVNIRPAKLKNLILLVKHWYHQVCLQGLWKETLPPVYALELLTIF 235 Query: 239 AWERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVI 298 AWE+G K F+ A+G RTVL L+ +Q LC++WT Y F++P + ++L+RQL +PRPVI Sbjct: 236 AWEQGCKKDAFSLAEGLRTVLGLIQQHQHLCVFWTVNYGFEDPAVGQFLQRQLKRPRPVI 295 Query: 299 LDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSW 343 LDPADPT +LG G W LAQEA + ++PCF G PV SW Sbjct: 296 LDPADPTWDLGNGAAWHWDLLAQEAASCYDHPCFLRGMGDPVQSW 340 >gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo sapiens] Length = 687 Score = 369 bits (946), Expect = e-102 Identities = 187/350 (53%), Positives = 249/350 (71%), Gaps = 9/350 (2%) Query: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63 L TP LDKFI+++L P+ CF QI+ A++II FLKE CFR S+ + ++V+GGS Sbjct: 340 LFTTPGHLLDKFIKEFLQPNKCFLEQIDSAVNIIRTFLKENCFRQSTAKI---QIVRGGS 396 Query: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123 + KGT L+ SDADLVVF + L ++ Q N R + ++EI QL+A RE+ ++ + Sbjct: 397 TAKGTALKTGSDADLVVFHNSLKSYTSQKNERHKIVKEIHEQLKAFWREKEEELEVSFEP 456 Query: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIE--ECTDLQ 181 P+W PR LSF L S L E V FDVLPAF+ALGQL+ G P+P++Y LI+ + +DL Sbjct: 457 PKWKAPRVLSFSLKSKVLNESVSFDVLPAFNALGQLSSGSTPSPEVYAGLIDLYKSSDLP 516 Query: 182 KEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKL---GKLPPQYALELLTVY 238 GEFSTCFT LQR+F++ RPTKLK LIRLVKHWY+ C++KL G LPP+YALELLT+Y Sbjct: 517 G-GEFSTCFTVLQRNFIRSRPTKLKDLIRLVKHWYKECERKLKPKGSLPPKYALELLTIY 575 Query: 239 AWERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVI 298 AWE+GS F+TA+GFRTVLELV YQQLCI+W Y+F++ + K+L QL K RPVI Sbjct: 576 AWEQGSGVPDFDTAEGFRTVLELVTQYQQLCIFWKVNYNFEDETVRKFLLSQLQKTRPVI 635 Query: 299 LDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVR 348 LDPA+PTG++GGGD W LA+EA+ WL+ PCFK+ G+P+ W + V+ Sbjct: 636 LDPAEPTGDVGGGDRWCWHLLAKEAKEWLSSPCFKDGTGNPIPPWKVPVK 685 Score = 231 bits (589), Expect = 8e-61 Identities = 142/349 (40%), Positives = 191/349 (54%), Gaps = 20/349 (5%) Query: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63 L + PA+ L FI++YL P + I+ ++ IC L+E +P+ V V GGS Sbjct: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP----EQFPL-VQGVAIGGS 62 Query: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123 G+ T LRG SD LV+F S L FQDQ + + + + +L+ C + FE+Q Sbjct: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK 122 Query: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDLQKE 183 G F + + + F+VL AF+AL P+P IY +L Sbjct: 123 SLDG------FTIQVFTKNQRISFEVLAAFNALSL---NDNPSPWIYRELKRSLDKTNAS 173 Query: 184 -GEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPP--QYALELLTVYAW 240 GEF+ CFTELQ+ F RP KLK LI L+KHW+Q C+KK+ LP YALELLTVYAW Sbjct: 174 PGEFAVCFTELQQKFFDNRPGKLKDLILLIKHWHQQCQKKIKDLPSLSPYALELLTVYAW 233 Query: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 E+G K +F+ A+G RTVLEL+ ++LCIYW Y+F++ I L QL RPVILD Sbjct: 234 EQGCRKDNFDIAEGVRTVLELIKCQEKLCIYWMVNYNFEDETIRNILLHQLQSARPVILD 293 Query: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRP 349 P DPT N+ GD W+ L +EA+ WL P N P SW +L P Sbjct: 294 PVDPTNNV-SGDKICWQWLKKEAQTWLTSPNLDN--ELPAPSWNVLPAP 339 >gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo sapiens] Length = 719 Score = 368 bits (945), Expect = e-102 Identities = 186/345 (53%), Positives = 246/345 (71%), Gaps = 9/345 (2%) Query: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63 L TP LDKFI+++L P+ CF QI+ A++II FLKE CFR S+ + ++V+GGS Sbjct: 340 LFTTPGHLLDKFIKEFLQPNKCFLEQIDSAVNIIRTFLKENCFRQSTAKI---QIVRGGS 396 Query: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123 + KGT L+ SDADLVVF + L ++ Q N R + ++EI QL+A RE+ ++ + Sbjct: 397 TAKGTALKTGSDADLVVFHNSLKSYTSQKNERHKIVKEIHEQLKAFWREKEEELEVSFEP 456 Query: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIE--ECTDLQ 181 P+W PR LSF L S L E V FDVLPAF+ALGQL+ G P+P++Y LI+ + +DL Sbjct: 457 PKWKAPRVLSFSLKSKVLNESVSFDVLPAFNALGQLSSGSTPSPEVYAGLIDLYKSSDLP 516 Query: 182 KEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKL---GKLPPQYALELLTVY 238 GEFSTCFT LQR+F++ RPTKLK LIRLVKHWY+ C++KL G LPP+YALELLT+Y Sbjct: 517 G-GEFSTCFTVLQRNFIRSRPTKLKDLIRLVKHWYKECERKLKPKGSLPPKYALELLTIY 575 Query: 239 AWERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVI 298 AWE+GS F+TA+GFRTVLELV YQQLCI+W Y+F++ + K+L QL K RPVI Sbjct: 576 AWEQGSGVPDFDTAEGFRTVLELVTQYQQLCIFWKVNYNFEDETVRKFLLSQLQKTRPVI 635 Query: 299 LDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSW 343 LDPA+PTG++GGGD W LA+EA+ WL+ PCFK+ G+P+ W Sbjct: 636 LDPAEPTGDVGGGDRWCWHLLAKEAKEWLSSPCFKDGTGNPIPPW 680 Score = 231 bits (589), Expect = 8e-61 Identities = 142/349 (40%), Positives = 191/349 (54%), Gaps = 20/349 (5%) Query: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63 L + PA+ L FI++YL P + I+ ++ IC L+E +P+ V V GGS Sbjct: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP----EQFPL-VQGVAIGGS 62 Query: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123 G+ T LRG SD LV+F S L FQDQ + + + + +L+ C + FE+Q Sbjct: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK 122 Query: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEECTDLQKE 183 G F + + + F+VL AF+AL P+P IY +L Sbjct: 123 SLDG------FTIQVFTKNQRISFEVLAAFNALSL---NDNPSPWIYRELKRSLDKTNAS 173 Query: 184 -GEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQNCKKKLGKLPP--QYALELLTVYAW 240 GEF+ CFTELQ+ F RP KLK LI L+KHW+Q C+KK+ LP YALELLTVYAW Sbjct: 174 PGEFAVCFTELQQKFFDNRPGKLKDLILLIKHWHQQCQKKIKDLPSLSPYALELLTVYAW 233 Query: 241 ERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILD 300 E+G K +F+ A+G RTVLEL+ ++LCIYW Y+F++ I L QL RPVILD Sbjct: 234 EQGCRKDNFDIAEGVRTVLELIKCQEKLCIYWMVNYNFEDETIRNILLHQLQSARPVILD 293 Query: 301 PADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSWILLVRP 349 P DPT N+ GD W+ L +EA+ WL P N P SW +L P Sbjct: 294 PVDPTNNV-SGDKICWQWLKKEAQTWLTSPNLDN--ELPAPSWNVLPAP 339 >gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo sapiens] Length = 514 Score = 240 bits (613), Expect = 1e-63 Identities = 141/350 (40%), Positives = 198/350 (56%), Gaps = 14/350 (4%) Query: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVCVSK 57 M +L +TPA LD F+ +L P ++ ++ A+ + FL++ F RG V V K Sbjct: 4 MQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLK 63 Query: 58 VVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSV 117 VVK GS G GT LR + +LV FLS +FQ+ + ++ I + + Q + + Sbjct: 64 VVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTM--WQSQDLLDL 121 Query: 118 KFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEEC 177 E P AL F + + E + ++PA+ ALG +P P++YV LI+ C Sbjct: 122 GLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKAC 181 Query: 178 TDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQN---CKKKLGKLPPQYALEL 234 G F F+ELQR+F+K RPTKLKSL+RLVKHWYQ + LPP YALEL Sbjct: 182 GG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQQYVKARSPRANLPPLYALEL 238 Query: 235 LTVYAWERGSMKT-HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTK 293 LT+YAWE G+ + +F +GF TV++L++ Y+ +CIYWTKYY N IIE +R+QL K Sbjct: 239 LTIYAWEMGTEEDENFMLDEGFTTVMDLLLEYEVICIYWTKYYTLHNAIIEDCVRKQLKK 298 Query: 294 PRPVILDPADPTGNLGGGDPKGWRQLAQEAEAWLNYPCFKNWDGSPVSSW 343 RP+ILDPADPT N+ G W +AQ A L C + +P+SSW Sbjct: 299 ERPIILDPADPTLNVAEG--YRWDIVAQRASQCLKQDCCYDNRENPISSW 346 >gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b [Homo sapiens] Length = 255 Score = 131 bits (330), Expect = 8e-31 Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 1 MMDLRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCF---RGSSYPVCVSK 57 M +L +TPA LD F+ +L P ++ ++ A+ + FL++ F RG V V K Sbjct: 4 MQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLK 63 Query: 58 VVKGGSSGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSV 117 VVK GS G GT LR + +LV FLS +FQ+ + ++ I + + Q + + Sbjct: 64 VVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTM--WQSQDLLDL 121 Query: 118 KFEVQAPRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQLTGGYKPNPQIYVKLIEEC 177 E P AL F + + E + ++PA+ ALG +P P++YV LI+ C Sbjct: 122 GLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKAC 181 Query: 178 TDLQKEGEFSTCFTELQRDFLKQRPTKLKSLIRLVKHWYQ 217 G F F+ELQR+F+K RPTKLKSL+RLVKHWYQ Sbjct: 182 GG---PGNFCPSFSELQRNFVKHRPTKLKSLLRLVKHWYQ 218 >gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo sapiens] Length = 172 Score = 73.2 bits (178), Expect = 3e-13 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 11/155 (7%) Query: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63 L + PA+ L FI++YL P + I+ ++ IC L+E +P+ V V GGS Sbjct: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP----EQFPL-VQGVAIGGS 62 Query: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123 G+ T LRG SD LV+F S L FQDQ + + + + +L+ C + FE+Q Sbjct: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK 122 Query: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQ 158 G F + + + F+VL AF+AL + Sbjct: 123 SLDG------FTIQVFTKNQRISFEVLAAFNALSK 151 >gi|24234747 interleukin enhancer binding factor 2 [Homo sapiens] Length = 390 Score = 31.2 bits (69), Expect = 1.5 Identities = 22/86 (25%), Positives = 38/86 (44%) Query: 20 LLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGSSGKGTTLRGRSDADLV 79 L P++ + I + I + ++ V + +V + GS KGT G + ADLV Sbjct: 64 LAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLV 123 Query: 80 VFLSPLTTFQDQLNRRGEFIQEIRRQ 105 V L L T + + ++ +R Q Sbjct: 124 VILKILPTLEAVAALGNKVVESLRAQ 149 >gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo sapiens] Length = 1429 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%) Query: 201 RPTKLKSLIRLVKHWYQNCK----KKLGKLPPQYALELLTVYAWERGSMK 246 RP++++ L L + W + CK + L + P +EL WE+GS K Sbjct: 1378 RPSQMRKLFSLSQSWDRKCKDGLYQALKETHPHLIMEL-----WEKGSKK 1422 >gi|14719835 NLR family, pyrin domain containing 1 isoform 4 [Homo sapiens] Length = 1399 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%) Query: 201 RPTKLKSLIRLVKHWYQNCK----KKLGKLPPQYALELLTVYAWERGSMK 246 RP++++ L L + W + CK + L + P +EL WE+GS K Sbjct: 1348 RPSQMRKLFSLSQSWDRKCKDGLYQALKETHPHLIMEL-----WEKGSKK 1392 >gi|14719833 NLR family, pyrin domain containing 1 isoform 3 [Homo sapiens] Length = 1443 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%) Query: 201 RPTKLKSLIRLVKHWYQNCK----KKLGKLPPQYALELLTVYAWERGSMK 246 RP++++ L L + W + CK + L + P +EL WE+GS K Sbjct: 1392 RPSQMRKLFSLSQSWDRKCKDGLYQALKETHPHLIMEL-----WEKGSKK 1436 >gi|14719829 NLR family, pyrin domain containing 1 isoform 1 [Homo sapiens] Length = 1473 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%) Query: 201 RPTKLKSLIRLVKHWYQNCK----KKLGKLPPQYALELLTVYAWERGSMK 246 RP++++ L L + W + CK + L + P +EL WE+GS K Sbjct: 1422 RPSQMRKLFSLSQSWDRKCKDGLYQALKETHPHLIMEL-----WEKGSKK 1466 >gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens] Length = 770 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 197 FLKQRPTKLKSLIRLVKHWYQ-NCKKKLGKLPPQYALEL 234 F+ RP K +++L++H Y C K+ +L P + L++ Sbjct: 261 FINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKI 299 >gi|189458896 postmeiotic segregation 1 isoform b [Homo sapiens] Length = 893 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 197 FLKQRPTKLKSLIRLVKHWYQ-NCKKKLGKLPPQYALEL 234 F+ RP K +++L++H Y C K+ +L P + L++ Sbjct: 222 FINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKI 260 >gi|4505911 postmeiotic segregation 1 isoform a [Homo sapiens] Length = 932 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 197 FLKQRPTKLKSLIRLVKHWYQ-NCKKKLGKLPPQYALEL 234 F+ RP K +++L++H Y C K+ +L P + L++ Sbjct: 261 FINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKI 299 >gi|62750354 matrin 3 [Homo sapiens] Length = 847 Score = 28.9 bits (63), Expect = 7.6 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 248 HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILDPADPTGN 307 H N A R L+ Y + W D + + + ++ +Q T P P IL P P+ + Sbjct: 309 HINGASHSRRCQLLLEIYPE----WNPDNDTGHTMGDPFMLQQSTNPAPGILGPPPPSFH 364 Query: 308 LGG 310 LGG Sbjct: 365 LGG 367 >gi|21626466 matrin 3 [Homo sapiens] Length = 847 Score = 28.9 bits (63), Expect = 7.6 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 248 HFNTAQGFRTVLELVINYQQLCIYWTKYYDFKNPIIEKYLRRQLTKPRPVILDPADPTGN 307 H N A R L+ Y + W D + + + ++ +Q T P P IL P P+ + Sbjct: 309 HINGASHSRRCQLLLEIYPE----WNPDNDTGHTMGDPFMLQQSTNPAPGILGPPPPSFH 364 Query: 308 LGG 310 LGG Sbjct: 365 LGG 367 >gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo sapiens] Length = 1858 Score = 28.5 bits (62), Expect = 9.9 Identities = 35/146 (23%), Positives = 53/146 (36%), Gaps = 23/146 (15%) Query: 181 QKEGEFSTCFTELQRDFLKQRPTKL-KSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYA 239 + E + TE + L + PTK K+ LV W +K GK P E Sbjct: 703 ETETALAEIITETEVPALNKCPTKYPKTKKHLVNEWLSEKNEKTGK-PSDGLSERPLRIT 761 Query: 240 WERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYY-DFKNPIIEKYLRRQLTKPRPVI 298 + + T N+ G + Y K+Y F +P + + RR+ Sbjct: 762 TDPEVLATQLNSLPG--------LTYSPHVYSTPKHYIRFTSPFLSEKRRRK-------- 805 Query: 299 LDPADPTGNLGGGDPKGWRQLAQEAE 324 +PT N+ G K W + A E E Sbjct: 806 ----EPTENISGSCKKRWLKQALEEE 827 >gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo sapiens] Length = 1858 Score = 28.5 bits (62), Expect = 9.9 Identities = 35/146 (23%), Positives = 53/146 (36%), Gaps = 23/146 (15%) Query: 181 QKEGEFSTCFTELQRDFLKQRPTKL-KSLIRLVKHWYQNCKKKLGKLPPQYALELLTVYA 239 + E + TE + L + PTK K+ LV W +K GK P E Sbjct: 703 ETETALAEIITETEVPALNKCPTKYPKTKKHLVNEWLSEKNEKTGK-PSDGLSERPLRIT 761 Query: 240 WERGSMKTHFNTAQGFRTVLELVINYQQLCIYWTKYY-DFKNPIIEKYLRRQLTKPRPVI 298 + + T N+ G + Y K+Y F +P + + RR+ Sbjct: 762 TDPEVLATQLNSLPG--------LTYSPHVYSTPKHYIRFTSPFLSEKRRRK-------- 805 Query: 299 LDPADPTGNLGGGDPKGWRQLAQEAE 324 +PT N+ G K W + A E E Sbjct: 806 ----EPTENISGSCKKRWLKQALEEE 827 >gi|33695078 protein phosphatase 2, regulatory subunit B'', beta isoform 1 [Homo sapiens] Length = 575 Score = 28.5 bits (62), Expect = 9.9 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 13/86 (15%) Query: 283 IEKYLRRQLTKPRPVILDPADPTGNLGGGDPKGWRQLAQE------AEAWLNYPCFKNWD 336 IEKYL + + ++ D G+ GG + W + A E AE P ++ Sbjct: 474 IEKYLDHEQKEQISLLRD-----GDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFE 528 Query: 337 G--SPVSSWILLVRPPASSLPFIPAP 360 SPV + +R P + PF AP Sbjct: 529 AELSPVEQKLSALRSPLAQRPFFEAP 554 >gi|41349491 protein phosphatase 2, regulatory subunit B'', beta isoform 2 [Homo sapiens] Length = 176 Score = 28.5 bits (62), Expect = 9.9 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 13/86 (15%) Query: 283 IEKYLRRQLTKPRPVILDPADPTGNLGGGDPKGWRQLAQE------AEAWLNYPCFKNWD 336 IEKYL + + ++ D G+ GG + W + A E AE P ++ Sbjct: 75 IEKYLDHEQKEQISLLRD-----GDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFE 129 Query: 337 G--SPVSSWILLVRPPASSLPFIPAP 360 SPV + +R P + PF AP Sbjct: 130 AELSPVEQKLSALRSPLAQRPFFEAP 155 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.139 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,540,735 Number of Sequences: 37866 Number of extensions: 752089 Number of successful extensions: 1746 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 1694 Number of HSP's gapped (non-prelim): 27 length of query: 364 length of database: 18,247,518 effective HSP length: 104 effective length of query: 260 effective length of database: 14,309,454 effective search space: 3720458040 effective search space used: 3720458040 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.