Search of human proteins with 73808086

Search of human proteins with 73808086

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|73808086 solute carrier family 35, member A2 isoform b [Homo
sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|73808086 solute carrier family 35, member A2 isoform b [Homo ...   482   e-136
gi|109948265 solute carrier family 35, member A2 isoform c [Homo...   271   4e-73
gi|5032211 solute carrier family 35, member A2 isoform a [Homo s...   271   4e-73
gi|6912668 solute carrier family 35 member 3A [Homo sapiens]          113   1e-25
gi|5453621 solute carrier family 35 (CMP-sialic acid transporter...    76   3e-14
gi|4758156 diacylglycerol kinase, iota [Homo sapiens]                  35   0.077
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo...    34   0.10 
gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]            32   0.38 
gi|57864582 hornerin [Homo sapiens]                                    30   1.4  
gi|239755210 PREDICTED: hypothetical protein [Homo sapiens]            30   1.4  
gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo ...    30   1.4  
gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo ...    30   1.4  
gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens]        30   1.9  
gi|12751497 hypothetical protein LOC65265 [Homo sapiens]               30   1.9  
gi|153791535 general control of amino acid synthesis 5-like 2 [H...    30   2.5  
gi|19923345 RNA binding motif protein 12 [Homo sapiens]                30   2.5  
gi|23510462 RNA binding motif protein 12 [Homo sapiens]                30   2.5  
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ...    30   2.5  
gi|27436940 reelin isoform b [Homo sapiens]                            29   3.2  
gi|27436938 reelin isoform a [Homo sapiens]                            29   3.2  
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ...    29   3.2  
gi|157785645 SPEG complex locus [Homo sapiens]                         29   3.2  
gi|206597556 kelch domain containing 7B [Homo sapiens]                 29   3.2  
gi|153792042 G protein-coupled receptor 178 [Homo sapiens]             29   3.2  
gi|13376611 zinc finger protein 703 [Homo sapiens]                     29   4.2  
gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]           29   4.2  
gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]           29   4.2  
gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens]           29   4.2  
gi|112807226 hypothetical protein LOC91748 [Homo sapiens]              29   4.2  
gi|47078300 apoptosis related protein 3 isoform b [Homo sapiens]       29   4.2  

>gi|73808086 solute carrier family 35, member A2 isoform b [Homo
           sapiens]
          Length = 242

 Score =  482 bits (1240), Expect = e-136
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL 60
           MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL
Sbjct: 1   MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL 60

Query: 61  PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL 120
           PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL
Sbjct: 61  PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL 120

Query: 121 IYTLQNNLQYVAISNLPAATFQPSPRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPP 180
           IYTLQNNLQYVAISNLPAATFQPSPRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPP
Sbjct: 121 IYTLQNNLQYVAISNLPAATFQPSPRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPP 180

Query: 181 WRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPGSSGFGRWSFLP 240
           WRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPGSSGFGRWSFLP
Sbjct: 181 WRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPGSSGFGRWSFLP 240

Query: 241 GH 242
           GH
Sbjct: 241 GH 242


>gi|109948265 solute carrier family 35, member A2 isoform c [Homo
           sapiens]
          Length = 393

 Score =  271 bits (693), Expect = 4e-73
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL 60
           MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL
Sbjct: 1   MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL 60

Query: 61  PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL 120
           PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL
Sbjct: 61  PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL 120

Query: 121 IYTLQNNLQYVAISNLPAATFQ 142
           IYTLQNNLQYVAISNLPAATFQ
Sbjct: 121 IYTLQNNLQYVAISNLPAATFQ 142


>gi|5032211 solute carrier family 35, member A2 isoform a [Homo
           sapiens]
          Length = 396

 Score =  271 bits (693), Expect = 4e-73
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL 60
           MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL
Sbjct: 1   MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTL 60

Query: 61  PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL 120
           PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL
Sbjct: 61  PGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSL 120

Query: 121 IYTLQNNLQYVAISNLPAATFQ 142
           IYTLQNNLQYVAISNLPAATFQ
Sbjct: 121 IYTLQNNLQYVAISNLPAATFQ 142


>gi|6912668 solute carrier family 35 member 3A [Homo sapiens]
          Length = 325

 Score =  113 bits (283), Expect = 1e-25
 Identities = 58/110 (52%), Positives = 85/110 (77%), Gaps = 2/110 (1%)

Query: 35  LKYISLAVLVVQNASLILSIRYARTLP--GDRFFATTAVVMAEVLKGLTCLLLLFAQKRG 92
           LKY+SL +LV Q  SL+L++RY+RTL   G R+ ++TAVV+AE+LK + C+LL++   + 
Sbjct: 5   LKYVSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKC 64

Query: 93  NVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQ 142
           +++ L   LH+ +L + ++TLKLA+PS IYTLQNNL YVA+SNL AAT+Q
Sbjct: 65  SLRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQ 114


>gi|5453621 solute carrier family 35 (CMP-sialic acid transporter),
           member A1 [Homo sapiens]
          Length = 337

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 1/107 (0%)

Query: 36  KYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVK 95
           K   LAV+ +  A   +++RY RT   + +F+TTAV + EV+K L  + +L A++ G++ 
Sbjct: 13  KLYCLAVMTLMAAVYTIALRYTRTSDKELYFSTTAVCITEVIKLLLSVGIL-AKETGSLG 71

Query: 96  HLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQ 142
                L E VL    + LKL+VPSL+Y +QNN+ ++A+SNL AA +Q
Sbjct: 72  RFKASLRENVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQ 118


>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
          Length = 1065

 Score = 34.7 bits (78), Expect = 0.077
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 154 CLCLRLRALRSPAASRAATTTAAVFPPW-----------RPHHGALSAKVSAGEVRAGSN 202
           C  L L A R PA + AA   AA  PP                GA++   SAGE + G+ 
Sbjct: 8   CHLLPLPAARGPARAPAAAAAAAASPPGPCSGAACAPSAAAGAGAMNPSSSAGEEK-GAT 66

Query: 203 GGTQGRGTGVEGVGHLQDPSRHPPGPGSS 231
           GG+   G+G        +    P G GS+
Sbjct: 67  GGSSSSGSGAGSCCLGAEGGADPRGAGSA 95


>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
           sapiens]
          Length = 323

 Score = 34.3 bits (77), Expect = 0.10
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 136 LPAATFQPSPRCSQSHSLCL---CLRLRALRSPAASRAATTTAAVFP--------PWRPH 184
           LPAAT  P+     +H   +    L   A  + AA+ AA  ++A  P          RP 
Sbjct: 198 LPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLPSVGSIRPP 257

Query: 185 HGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDP 221
           HG L +  +A     G  GG  G   G +  G +  P
Sbjct: 258 HGLLKSPSAAAAAPLGGGGGGSGASGGFQHWGGMPCP 294


>gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 17/78 (21%)

Query: 160 RALRSPAASRAATTTAAVFPPWRP-HHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHL 218
           R+ R PAA +     A VFP   P HHG                 G  G G+  +    L
Sbjct: 149 RSTRVPAAGKGGDRRAPVFPTLVPLHHGP---------------PGASGVGSERDRKFQL 193

Query: 219 -QDPSRHPPGPGSSGFGR 235
            Q P+R PP PG SG  R
Sbjct: 194 HQTPARGPPFPGISGMTR 211


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 185  HGALSAKVSAGEVRAGSNGG-TQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWSFLPGH 242
            HG+  ++ S+G  R GS  G +  RG    G+GH     +H  G G SS  G +    GH
Sbjct: 1222 HGS-GSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGH 1280



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 185  HGALSAKVSAGEVRAGSNGG-TQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWSFLPGH 242
            HG+  ++ S+G  R GS  G +  RG    G+GH     +H  G G SS  G +    GH
Sbjct: 1692 HGS-GSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGH 1750



 Score = 29.6 bits (65), Expect = 2.5
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 185  HGALSAKVSAGEVRAGSNGG-TQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWSFLPGH 242
            HG+  ++ S+G  R GS  G +  RG    G+GH     +H  G G SS  G +    GH
Sbjct: 2632 HGS-GSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGH 2690



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 180  PWRPHHGALSAKVSA-GEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWS 237
            P R  HG+ S + S+ G  R+GS G +  RG    G GH           G SSG+G+  
Sbjct: 1009 PSRGRHGSGSGQSSSYGPYRSGS-GWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHG 1067

Query: 238  FLPGH 242
               GH
Sbjct: 1068 SSSGH 1072



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 185  HGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPS--RHPPGPGSS 231
            HG+ S++ S+G  R GS  G Q  G G  G G  Q PS  RH  G G S
Sbjct: 1105 HGSGSSQ-SSGYGRQGSGSG-QSPGHGQRGSGSRQSPSYGRHGSGSGRS 1151



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 185  HGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPS--RHPPGPGSS 231
            HG+ S++ S+G  R GS  G Q  G G  G G  Q PS  RH  G G S
Sbjct: 1575 HGSGSSQ-SSGYGRQGSGSG-QSPGHGQRGSGSRQSPSYGRHGSGSGRS 1621



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 185  HGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPS--RHPPGPGSS 231
            HG+ S++ S+G  R GS  G Q  G G  G G  Q PS  RH  G G S
Sbjct: 2045 HGSGSSQ-SSGYGRQGSGSG-QSPGHGQRGSGSRQSPSYGRHGSGSGRS 2091



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 185  HGALSAKVSAGEVRAGSNGG-TQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWSFLPGH 242
            HG+  ++ S+G  R GS  G +  RG    G GH     +H  G G SS  G +    GH
Sbjct: 2162 HGS-GSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGH 2220



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 185  HGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPS--RHPPGPGSS 231
            HG+ S++ S+G  R GS  G Q  G G  G G  Q PS  RH  G G S
Sbjct: 2515 HGSGSSQ-SSGYGRQGSGSG-QSPGHGQRGSGSRQSPSYGRHGSGSGRS 2561



 Score = 28.9 bits (63), Expect = 4.2
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 20/78 (25%)

Query: 185 HGALSAKVSAGEVRAGSNGGT-----------QGRGTGVEGVGHLQDPS--RHPPGPG-S 230
           HG+ S + S GE    S+G +           Q  G G +G G  Q PS  RH  G G S
Sbjct: 260 HGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHS 319

Query: 231 SGFGR------WSFLPGH 242
           S  G+      +S+  GH
Sbjct: 320 SSHGQHGSGSSYSYSRGH 337



 Score = 28.5 bits (62), Expect = 5.5
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 180  PWRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWSF 238
            P R  HG+ S + S+       +G +  RG    G GH           G SSG+G+   
Sbjct: 2419 PSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 2478

Query: 239  LPGH 242
              GH
Sbjct: 2479 SSGH 2482



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 182 RPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWS 237
           R  HG+ S +      R   +G +   G    G G      RH  G G SSGFG  S
Sbjct: 880 RGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKS 936



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 16/66 (24%)

Query: 185  HGALSAKVSAGEVRAGSNGGT-----------QGRGTGVEGVGHLQDPS----RHPPGPG 229
            HG+ S + S GE    S+G +           Q  G G  G G  Q PS    RH  G G
Sbjct: 1900 HGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSG 1959

Query: 230  -SSGFG 234
             SS +G
Sbjct: 1960 QSSSYG 1965



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 185  HGALSAKVSAGEVRAGSNGGT-----------QGRGTGVEGVGHLQDPSRHPPGPG 229
            HG+ S + S GE    S+G +           Q  G G +G G  Q PSR   G G
Sbjct: 2606 HGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSG 2661



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 180  PWRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPG-SSGFGRWSF 238
            P R  HG+ S + S+       +G +  RG    G GH           G SSG+G+   
Sbjct: 1949 PSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 2008

Query: 239  LPGH 242
              GH
Sbjct: 2009 SSGH 2012



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 11/57 (19%)

Query: 185  HGALSAKVSAGEVRAGSNGGT-----------QGRGTGVEGVGHLQDPSRHPPGPGS 230
            HG+ S + S GE    S+G +           Q  G G +G G    PSR   G GS
Sbjct: 2136 HGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGS 2192


>gi|239755210 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 241

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 21  GALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGL 80
           GAL       AH ++  + LA L +  A L L +    TL      A  AV+  ++L  +
Sbjct: 157 GALLLTLVRQAHGQVVVLLLAALELAAAGLALLLEPLHTL---LVLAQQAVLHPQLLDEV 213

Query: 81  TCLLLLFAQKRGNVKHLVLFLHE 103
               +  AQ+RG V HL+L LH+
Sbjct: 214 ----IFGAQQRGQVLHLLLQLHD 232


>gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo
           sapiens]
          Length = 241

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 21  GALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGL 80
           GAL       AH ++  + LA L +  A L L +    TL      A  AV+  ++L  +
Sbjct: 157 GALLLTLVRQAHGQVVVLLLAALELAAAGLALLLEPLHTL---LVLAQQAVLHPQLLDEV 213

Query: 81  TCLLLLFAQKRGNVKHLVLFLHE 103
               +  AQ+RG V HL+L LH+
Sbjct: 214 ----IFGAQQRGQVLHLLLQLHD 232


>gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo
           sapiens]
          Length = 241

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 21  GALEPGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGL 80
           GAL       AH ++  + LA L +  A L L +    TL      A  AV+  ++L  +
Sbjct: 157 GALLLTLVRQAHGQVVVLLLAALELAAAGLALLLEPLHTL---LVLAQQAVLHPQLLDEV 213

Query: 81  TCLLLLFAQKRGNVKHLVLFLHE 103
               +  AQ+RG V HL+L LH+
Sbjct: 214 ----IFGAQQRGQVLHLLLQLHD 232


>gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens]
          Length = 269

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 17/54 (31%), Positives = 21/54 (38%)

Query: 184 HHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPGSSGFGRWS 237
           HH        +G   +G+ GGT G G G  G       S  PP     G G+ S
Sbjct: 31  HHCTGRGGAGSGGAGSGAAGGTGGSGGGGFGAATFASTSATPPQSNGGGGGKQS 84


>gi|12751497 hypothetical protein LOC65265 [Homo sapiens]
          Length = 229

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 4/35 (11%)

Query: 1  MAAVG--AGGSTAAPGPG--AVSAGALEPGTASAA 31
          MAA+G  AG + AAPGPG    S GA  PG  S+A
Sbjct: 1  MAALGHLAGEAAAAPGPGTPCASRGARLPGPVSSA 35


>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
           sapiens]
          Length = 837

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 160 RALRSPAASRAATTTAAVFPPWRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQ 219
           R L+SPA   A T T A  P   P      A   A       + GT G G G  G G   
Sbjct: 17  RPLQSPAP--APTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGTGGPGVGSGGAGSGG 74

Query: 220 DPSR 223
           DP+R
Sbjct: 75  DPAR 78


>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
          Length = 932

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)

Query: 200 GSNGGTQGRGTGVEGV----GHLQDPSRHPPGPG 229
           GS GG  G G+G  G+    GHL  P    PGPG
Sbjct: 797 GSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG 830


>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
          Length = 932

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%)

Query: 200 GSNGGTQGRGTGVEGV----GHLQDPSRHPPGPG 229
           GS GG  G G+G  G+    GHL  P    PGPG
Sbjct: 797 GSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG 830


>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2
          [Homo sapiens]
          Length = 1461

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 1  MAAVGAGGSTAAPGPGAVSAGALEPGTASAAHRRLKYISLAVLVVQNAS 49
          MAA G GGS+ A    A SAGALE    S+  R+ + ++  +  +Q  S
Sbjct: 1  MAAGGGGGSSKASSSSASSAGALE----SSLDRKFQSVTNTMESIQGLS 45


>gi|27436940 reelin isoform b [Homo sapiens]
          Length = 3458

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 171  ATTTAAVFPPWRPHHGALSAKVSAGEVRAGSNGGTQ 206
            A T A  F  W+P HG  SA+ +  +V  G N  +Q
Sbjct: 1568 AKTPATAFRWWQPQHGKHSAQWALDDVLIGMNDSSQ 1603


>gi|27436938 reelin isoform a [Homo sapiens]
          Length = 3460

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 171  ATTTAAVFPPWRPHHGALSAKVSAGEVRAGSNGGTQ 206
            A T A  F  W+P HG  SA+ +  +V  G N  +Q
Sbjct: 1568 AKTPATAFRWWQPQHGKHSAQWALDDVLIGMNDSSQ 1603


>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
           sapiens]
          Length = 233

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 4/100 (4%)

Query: 137 PAATFQPS-PRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPPWRPHHGALSAKVSAG 195
           P A   PS P+ S S S  LC R   LRS +        +    P  P   + +A   + 
Sbjct: 80  PLALIPPSEPQHSPSKSRALCNR--GLRSTSRCTQQGLPSVPPSPLTPLPPSPTAPRRSQ 137

Query: 196 EVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPGSSGFGR 235
               GS  G +G GTG   + H   PS+ PP       GR
Sbjct: 138 YPSPGSRVG-RGLGTGRGKLAHRVAPSKEPPERACGSRGR 176


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 163  RSPAASRAATTTAAVFPPWRPHHGALSAKVSAGEVRAGSNG-------GTQGRGTGVEGV 215
            R+P+  + A +  A+  P +    A  A    GE+R GS+        G +  G G+   
Sbjct: 1978 RAPSQDQEAPSPEALPSPGQ--EPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHKA 2035

Query: 216  GHLQDPSRHPPGPGSSGFGR 235
              ++ P R  P PG++   R
Sbjct: 2036 ASVELPQRRSPSPGATRLAR 2055


>gi|206597556 kelch domain containing 7B [Homo sapiens]
          Length = 594

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 7   GGSTAAPGPGAVSAGALEPGTASAAHRRL 35
           GG     GP   S+ ALEP TA+A  RRL
Sbjct: 190 GGWGVVEGPRKPSSRALEPATAAALRRRL 218


>gi|153792042 G protein-coupled receptor 178 [Homo sapiens]
          Length = 612

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 165 PAASRAATTTAAVFPPWRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQD---- 220
           P+ +R  TT+ A  PP R             E R G+ G T+G   G  G G L+     
Sbjct: 42  PSPARPLTTSPAPAPPPRSRPARQQPDPQCWEKRGGAGGDTKGGAAG-PGPGRLRGMDAE 100

Query: 221 -PSRHPP 226
            P+  PP
Sbjct: 101 YPAFEPP 107


>gi|13376611 zinc finger protein 703 [Homo sapiens]
          Length = 590

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 164 SPAASRAATTTAAVFPPWRPHHGALSAKVSA---GEVRAGSNGGTQGRGTGVEGVGHLQD 220
           SP         +A  PP+ PH   +SA  S+   G  R GS   +  +  G  G G L  
Sbjct: 185 SPGDKAGFRVPSAACPPFPPHGAPVSASSSSSSPGGSRGGSPHHSDCKNGGGVGGGELDK 244

Query: 221 PSRHP-PGPGSSGFGR 235
             + P P P  +   R
Sbjct: 245 KDQEPKPSPEPAAVSR 260


>gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]
          Length = 851

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 137 PAATFQPSPRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPP 180
           P     PSP C Q+H++C C+      + A  +     A+V PP
Sbjct: 691 PQPDLLPSPSC-QAHTVCSCIVSEVTTAMAERQGGPPRASVSPP 733


>gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]
          Length = 1070

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 137 PAATFQPSPRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPP 180
           P     PSP C Q+H++C C+      + A  +     A+V PP
Sbjct: 910 PQPDLLPSPSC-QAHTVCSCIVSEVTTAMAERQGGPPRASVSPP 952


>gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens]
          Length = 1015

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 137 PAATFQPSPRCSQSHSLCLCLRLRALRSPAASRAATTTAAVFPP 180
           P     PSP C Q+H++C C+      + A  +     A+V PP
Sbjct: 855 PQPDLLPSPSC-QAHTVCSCIVSEVTTAMAERQGGPPRASVSPP 897


>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 165 PAASRAATTTAAVFPPWRPHHGALSAKVSA----GEVRAGSNGGTQGRGTGVEGVGHLQD 220
           P  S  A   + V+ P R     LS +V++      V A   G  +G G GV      Q 
Sbjct: 65  PPPSSLALLNSVVYGPERTSAAMLSQQVASVKWPNSVMAPGRGPERGGGGGVSDSSWQQQ 124

Query: 221 PSRHPP 226
           P + PP
Sbjct: 125 PGQPPP 130


>gi|47078300 apoptosis related protein 3 isoform b [Homo sapiens]
          Length = 284

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 3  AVGAG--GSTAAPGPGAVSAGALEPGTASAAHRRLKYI------SLAVLVVQNASLILSI 54
          A G G  G     GP A+  GA  PG AS+   R + +      SL  LV   A+L+L++
Sbjct: 19 ATGPGRLGHARGRGPDALRGGAAGPGRASSGAPRERKMAPHGPGSLTTLVPWAAALLLAL 78

Query: 55 RYARTL 60
             R L
Sbjct: 79 GVERAL 84


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,495,447
Number of Sequences: 37866
Number of extensions: 487150
Number of successful extensions: 2822
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 2678
Number of HSP's gapped (non-prelim): 179
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.