Guide to the Human Genome
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Name: SLC35A3 Sequence: fasta or formatted (325aa) NCBI GI: 6912668
Description:

solute carrier family 35 member 3A

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         24           2
 C cysteine            0.9          3           1
 D aspartate           2.8          9           1
 E glutamate           2.8          9           2
 F phenylalanine       5.8         19           2
 G glycine             6.8         22           2
 H histidine           0.3          1           1
 I isoleucine          6.8         22           2
 K lysine              5.8         19           2
 L leucine            15.4         50           2
 M methionine          2.5          8           1
 N asparagine          3.4         11           2
 P proline             2.5          8           1
 Q glutamine           4.0         13           1
 R arginine            2.2          7           1
 S serine              8.6         28           2
 T threonine           6.5         21           2
 V valine              8.9         29           3
 W tryptophan          1.5          5           1
 Y tyrosine            5.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35 member 3A 
SLC35A2               0.462   solute carrier family 35, member A2 isoform c [Homo...
SLC35A2               0.462   solute carrier family 35, member A2 isoform a 
SLC35A1               0.350   solute carrier family 35 (CMP-sialic acid transporter...
SLC35A2               0.145   solute carrier family 35, member A2 isoform b 
SLC35A5               0.135   solute carrier family 35, member A5 
SLC35A4               0.114   solute carrier family 35, member A4 
C2orf18               0.033   ANT2-binding protein 
TMEM22                0.030   transmembrane protein 22 
TMEM22                0.030   transmembrane protein 22 
TMEM22                0.030   transmembrane protein 22 
TM7SF4                0.012   dendritic cell-specific transmembrane protein 
CTNNA2                0.010   catenin, alpha 2 
BNC2                  0.008   basonuclin 2 
LOC649660             0.008   PREDICTED: similar to transient receptor potential ...
ARL6IP5               0.007   ADP-ribosylation-like factor 6 interacting protein 5 ...
CTNNA1                0.007   catenin, alpha 1 
SLC35D1               0.007   solute carrier family 35 (UDP-glucuronic acid/UDP-N-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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