Guide to the Human Genome
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Name: SLC35A2 Sequence: fasta or formatted (242aa) NCBI GI: 73808086
Description:

solute carrier family 35, member A2 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [393aa] solute carrier family 35, member A2 isoform c
alt prot [396aa] solute carrier family 35, member A2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         34           2
 C cysteine            1.7          4           1
 D aspartate           1.2          3           1
 E glutamate           2.1          5           1
 F phenylalanine       3.3          8           2
 G glycine            10.3         25           2
 H histidine           3.7          9           2
 I isoleucine          2.1          5           1
 K lysine              2.5          6           1
 L leucine            12.8         31           4
 M methionine          0.8          2           1
 N asparagine          2.5          6           2
 P proline             7.0         17           2
 Q glutamine           3.7          9           1
 R arginine            6.6         16           2
 S serine              8.7         21           2
 T threonine           5.8         14           3
 V valine              8.3         20           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member A2 isoform b 
SLC35A2               0.538   solute carrier family 35, member A2 isoform c [Homo...
SLC35A2               0.538   solute carrier family 35, member A2 isoform a 
SLC35A3               0.193   solute carrier family 35 member 3A 
SLC35A1               0.112   solute carrier family 35 (CMP-sialic acid transporter...
DGKI                  0.022   diacylglycerol kinase, iota 
OLIG2                 0.020   oligodendrocyte lineage transcription factor 2 [Homo...
LOC645321             0.015   PREDICTED: hypothetical protein 
HRNR                  0.011   hornerin 
LOC100294001          0.011   PREDICTED: hypothetical protein 
LOC100290969          0.011   PREDICTED: hypothetical protein XP_002347122 
LOC100289446          0.011   PREDICTED: hypothetical protein XP_002344250 
GATAD1                0.011   GATA zinc finger domain containing 1 
C8orf33               0.011   hypothetical protein LOC65265 
KAT2A                 0.011   general control of amino acid synthesis 5-like 2 [H...
RBM12                 0.011   RNA binding motif protein 12 
RBM12                 0.011   RNA binding motif protein 12 
RPRD2                 0.011   Regulation of nuclear pre-mRNA domain containing 2 ...
RELN                  0.009   reelin isoform b 
RELN                  0.009   reelin isoform a 
LOC100288382          0.009   PREDICTED: hypothetical protein XP_002342213 
SPEG                  0.009   SPEG complex locus 
KLHDC7B               0.009   kelch domain containing 7B 
TMEM181               0.009   G protein-coupled receptor 178 
ZNF703                0.009   zinc finger protein 703 
LOC100132713          0.009   PREDICTED: similar to hCG1654128 
LOC100132713          0.009   PREDICTED: similar to hCG1654128 
LOC100132713          0.009   PREDICTED: similar to hCG1654128 
C14orf43              0.009   hypothetical protein LOC91748 
C2orf28               0.009   apoptosis related protein 3 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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