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Search of human proteins with 71896667
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71896667 retinaldehyde binding protein 1-like 2 [Homo
sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71896667 retinaldehyde binding protein 1-like 2 [Homo sapiens] 663 0.0
gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens] 539 e-153
gi|4506541 retinaldehyde binding protein 1 [Homo sapiens] 201 1e-51
gi|85861243 tocopherol (alpha) transfer protein-like [Homo sapiens] 183 2e-46
gi|85861250 tocopherol (alpha) transfer protein-like [Homo sapiens] 183 2e-46
gi|4507723 tocopherol (alpha) transfer protein [Homo sapiens] 142 3e-34
gi|27923592 SEC14-like 3 [Homo sapiens] 75 1e-13
gi|238624167 SEC14p-like protein TAP3 isoform b [Homo sapiens] 68 1e-11
gi|28376621 SEC14p-like protein TAP3 isoform a [Homo sapiens] 68 1e-11
gi|209364516 SEC14-like 2 isoform 2 [Homo sapiens] 61 2e-09
gi|7110715 SEC14-like 2 isoform 1 [Homo sapiens] 61 2e-09
gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Hom... 60 2e-09
gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Hom... 59 6e-09
gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Hom... 59 6e-09
gi|150010661 SEC14-like 5 [Homo sapiens] 59 8e-09
gi|4506301 protein tyrosine phosphatase, non-receptor type 9 [Ho... 58 1e-08
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens] 57 2e-08
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 57 2e-08
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 57 2e-08
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens] 57 2e-08
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 57 2e-08
gi|228008343 BCL2/adenovirus E1B 19kD interacting protein like i... 35 0.12
gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like i... 35 0.12
gi|168480080 BCL2/adenovirus E1B 19kD interacting protein 2 [Hom... 30 2.9
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 30 2.9
gi|169808399 prenyl diphosphate synthase, subunit 2 [Homo sapiens] 30 3.8
>gi|71896667 retinaldehyde binding protein 1-like 2 [Homo sapiens]
Length = 327
Score = 663 bits (1710), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MTHLQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRA 60
MTHLQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRA
Sbjct: 1 MTHLQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRA 60
Query: 61 RKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILV 120
RKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILV
Sbjct: 61 RKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILV 120
Query: 121 LFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSML 180
LFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSML
Sbjct: 121 LFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSML 180
Query: 181 RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLI 240
RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLI
Sbjct: 181 RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLI 240
Query: 241 HPEILPSEFGGMLPPYDMGTWARTLLDHEYDDDSEYNVDSYSMPVKEVEKELSPKSMKRS 300
HPEILPSEFGGMLPPYDMGTWARTLLDHEYDDDSEYNVDSYSMPVKEVEKELSPKSMKRS
Sbjct: 241 HPEILPSEFGGMLPPYDMGTWARTLLDHEYDDDSEYNVDSYSMPVKEVEKELSPKSMKRS 300
Query: 301 QSVVDPTVLKRMDKNEEENMQPLLSLD 327
QSVVDPTVLKRMDKNEEENMQPLLSLD
Sbjct: 301 QSVVDPTVLKRMDKNEEENMQPLLSLD 327
>gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens]
Length = 354
Score = 539 bits (1389), Expect = e-153
Identities = 265/332 (79%), Positives = 294/332 (88%), Gaps = 5/332 (1%)
Query: 1 MTHLQAGLSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRA 60
MTHLQAGLSPET+EKARLELNENPD LHQDIQ+VRDM+ITRPDIGFLRTDDAFILRFLRA
Sbjct: 23 MTHLQAGLSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRA 82
Query: 61 RKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILV 120
RKFH +AFRLLAQYF+YRQ NLDMFK+FKA DPGIK+AL DGFPG L N DHYGRKIL+
Sbjct: 83 RKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKILL 142
Query: 121 LFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSML 180
LFAANWDQSR + DILRAILLSLE +IEDPELQ+NGF+LIIDWSNF+FKQASKLTPS+L
Sbjct: 143 LFAANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSIL 202
Query: 181 RLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLI 240
+LAIEGLQDSFPARFGG+HFVNQPWYIHALYT+I+PFLK+KTRKRIFLHGNNLNSLHQLI
Sbjct: 203 KLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLI 262
Query: 241 HPEILPSEFGGMLPPYDMGTWARTLLDHEYDDDSEYNVDSY-SMPVK----EVEKELSPK 295
HPE LPSEFGG LPPYDMGTWARTLL +Y D+++Y SY +M VK +E+E SPK
Sbjct: 263 HPEFLPSEFGGTLPPYDMGTWARTLLGPDYSDENDYTHTSYNAMHVKHTSSNLERECSPK 322
Query: 296 SMKRSQSVVDPTVLKRMDKNEEENMQPLLSLD 327
MKRSQSVV+ LK +K E EN QPLL+LD
Sbjct: 323 LMKRSQSVVEAGTLKHEEKGENENTQPLLALD 354
>gi|4506541 retinaldehyde binding protein 1 [Homo sapiens]
Length = 317
Score = 201 bits (510), Expect = 1e-51
Identities = 104/260 (40%), Positives = 156/260 (60%), Gaps = 12/260 (4%)
Query: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIG----------FLRTDDAFILRF 57
L TL+KA+ ELNE +T + ++E+++MV + G D F LRF
Sbjct: 40 LPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRF 99
Query: 58 LRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRK 117
+RARKF+ A+ LL Y +R Q ++F S + ++ ++ G+PG L++ D YGR
Sbjct: 100 IRARKFNVGRAYELLRGYVNFRLQYPELFDSL--SPEAVRCTIEAGYPGVLSSRDKYGRV 157
Query: 118 ILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP 177
+++ NW T +IL+A LE ++E+ E Q+NGF +I ++ FT +QA+ L
Sbjct: 158 VMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRT 217
Query: 178 SMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLH 237
S LR ++ LQDSFPARF IHF++QPWY Y V++PFLK K +R+F+HG++L+ +
Sbjct: 218 SDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFY 277
Query: 238 QLIHPEILPSEFGGMLPPYD 257
Q I ILPS+FGG LP YD
Sbjct: 278 QEIDENILPSDFGGTLPKYD 297
>gi|85861243 tocopherol (alpha) transfer protein-like [Homo sapiens]
Length = 342
Score = 183 bits (465), Expect = 2e-46
Identities = 106/271 (39%), Positives = 151/271 (55%), Gaps = 6/271 (2%)
Query: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRT--DDAFILRFLRARKFHH 65
L+ + + KAR EL E P+ +D+Q +RDMV R + L T DDAF+LRFLRARKF +
Sbjct: 35 LTEDLVTKAREELQEKPEWRLRDVQALRDMV--RKEYPNLSTSLDDAFLLRFLRARKFDY 92
Query: 66 FEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAAN 125
A +LL Y R+ ++F + K + +K L GF L + D G ++ +
Sbjct: 93 DRALQLLVNYHSCRRSWPEVFNNLKPS--ALKDVLASGFLTVLPHTDPRGCHVVCIRPDR 150
Query: 126 WDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIE 185
W S Y + + +RAI L+LE +I+ E QVNG V++ D+ + +AS P + + I
Sbjct: 151 WIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIG 210
Query: 186 GLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEIL 245
LQD FP R +H VN+P ++ +I+PFLKEK R FLHG++LNSLH + IL
Sbjct: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
Query: 246 PSEFGGMLPPYDMGTWARTLLDHEYDDDSEY 276
P E+GG D TW LL E D E+
Sbjct: 271 PKEYGGTAGELDTATWNAVLLASEDDFVKEF 301
>gi|85861250 tocopherol (alpha) transfer protein-like [Homo sapiens]
Length = 342
Score = 183 bits (465), Expect = 2e-46
Identities = 106/271 (39%), Positives = 151/271 (55%), Gaps = 6/271 (2%)
Query: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRT--DDAFILRFLRARKFHH 65
L+ + + KAR EL E P+ +D+Q +RDMV R + L T DDAF+LRFLRARKF +
Sbjct: 35 LTEDLVTKAREELQEKPEWRLRDVQALRDMV--RKEYPNLSTSLDDAFLLRFLRARKFDY 92
Query: 66 FEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAAN 125
A +LL Y R+ ++F + K + +K L GF L + D G ++ +
Sbjct: 93 DRALQLLVNYHSCRRSWPEVFNNLKPS--ALKDVLASGFLTVLPHTDPRGCHVVCIRPDR 150
Query: 126 WDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIE 185
W S Y + + +RAI L+LE +I+ E QVNG V++ D+ + +AS P + + I
Sbjct: 151 WIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIG 210
Query: 186 GLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEIL 245
LQD FP R +H VN+P ++ +I+PFLKEK R FLHG++LNSLH + IL
Sbjct: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
Query: 246 PSEFGGMLPPYDMGTWARTLLDHEYDDDSEY 276
P E+GG D TW LL E D E+
Sbjct: 271 PKEYGGTAGELDTATWNAVLLASEDDFVKEF 301
>gi|4507723 tocopherol (alpha) transfer protein [Homo sapiens]
Length = 278
Score = 142 bits (359), Expect = 3e-34
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 2/201 (0%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D+F+LRFLRAR F A+RLL Y+++R + ++ S I LK G+ G L +
Sbjct: 49 DSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEI--SADLHPRSIIGLLKAGYHGVLRS 106
Query: 111 LDHYGRKILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFK 170
D G K+L+ A+WD +T D+ R L++ E ++++ E Q NG I D + F
Sbjct: 107 RDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFS 166
Query: 171 QASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHG 230
A ++TPS+ + L DSFP + GIH +N+P HA++++I+PFL EK ++RI +HG
Sbjct: 167 HAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHG 226
Query: 231 NNLNSLHQLIHPEILPSEFGG 251
NN P+ILP E+GG
Sbjct: 227 NNYKQSLLQHFPDILPLEYGG 247
>gi|27923592 SEC14-like 3 [Homo sapiens]
Length = 400
Score = 74.7 bits (182), Expect = 1e-13
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 21/245 (8%)
Query: 25 DTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLD 84
+TL + + V+D++ P+ DD F+LR+LRAR F ++ LL +Y E+R + +D
Sbjct: 14 ETLAKFRENVQDVLPALPN-----PDDYFLLRWLRARNFDLQKSEALLRKYMEFR-KTMD 67
Query: 85 MFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQS----RYTLVDILRAI 140
+ P + ++ PGGL D G + D T D+L+
Sbjct: 68 IDHILDWQPP---EVIQKYMPGGLCGYDRDGCPVWYDIIGPLDPKGLLFSVTKQDLLKTK 124
Query: 141 LLSLEAMIEDPELQ-------VNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPA 193
+ E ++ + +LQ + V+I D K K + + L++++P
Sbjct: 125 MRDCERILHECDLQTERLGKKIETIVMIFDCEGLGLKHFWKPLVEVYQEFFGLLEENYPE 184
Query: 194 RFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNN-LNSLHQLIHPEILPSEFGGM 252
+ V Y +++PFL E TR++I + GNN L +LI PE LP++FGG
Sbjct: 185 TLKFMLIVKATKLFPVGYNLMKPFLSEDTRRKIIVLGNNWKEGLLKLISPEELPAQFGGT 244
Query: 253 LPPYD 257
L D
Sbjct: 245 LTDPD 249
>gi|238624167 SEC14p-like protein TAP3 isoform b [Homo sapiens]
Length = 360
Score = 68.2 bits (165), Expect = 1e-11
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 50 DDAFILRFLRARKFHHFEAFRLLAQYFEYR-QQNLDMFKSFKATDPGIKQALKDGFPGGL 108
DD F+LR+LRAR F ++ +L ++ E+R QQ+LD +++ P + Q GGL
Sbjct: 34 DDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQ--PPEVIQLYDS---GGL 88
Query: 109 ANLDHYGRKILVLFAANWDQSRYTL----VDILRAILLSLEAMIEDPELQ-------VNG 157
D+ G + + D L D++R + E ++ + ELQ +
Sbjct: 89 CGYDYEGCPVYFNIIGSLDPKGLLLSASKQDMIRKRIKVCELLLHECELQTQKLGRKIEM 148
Query: 158 FVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPF 217
+++ D + K K + + L+ ++P + + P + +++ F
Sbjct: 149 ALMVFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSF 208
Query: 218 LKEKTRKRIFLHGNN-LNSLHQLIHPEILPSEFGGMLPPYD 257
+ E+TR++I + G+N L + I P+ LP EFGG + D
Sbjct: 209 MSEETRRKIVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|28376621 SEC14p-like protein TAP3 isoform a [Homo sapiens]
Length = 406
Score = 68.2 bits (165), Expect = 1e-11
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 50 DDAFILRFLRARKFHHFEAFRLLAQYFEYR-QQNLDMFKSFKATDPGIKQALKDGFPGGL 108
DD F+LR+LRAR F ++ +L ++ E+R QQ+LD +++ P + Q GGL
Sbjct: 34 DDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQ--PPEVIQLYDS---GGL 88
Query: 109 ANLDHYGRKILVLFAANWDQSRYTL----VDILRAILLSLEAMIEDPELQ-------VNG 157
D+ G + + D L D++R + E ++ + ELQ +
Sbjct: 89 CGYDYEGCPVYFNIIGSLDPKGLLLSASKQDMIRKRIKVCELLLHECELQTQKLGRKIEM 148
Query: 158 FVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPF 217
+++ D + K K + + L+ ++P + + P + +++ F
Sbjct: 149 ALMVFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVKSF 208
Query: 218 LKEKTRKRIFLHGNN-LNSLHQLIHPEILPSEFGGMLPPYD 257
+ E+TR++I + G+N L + I P+ LP EFGG + D
Sbjct: 209 MSEETRRKIVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|209364516 SEC14-like 2 isoform 2 [Homo sapiens]
Length = 392
Score = 60.8 bits (146), Expect = 2e-09
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 32 QEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQQ-NLDMFKSFK 90
+ V+D++ P+ DD F+LR+LRAR F ++ +L ++ E+R+Q ++D S++
Sbjct: 21 ENVQDVLPALPN-----PDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQ 75
Query: 91 ATDPGIKQALKDGFPGG-----------LANLDHYGRKILVLFAANWDQSRYTLVDILRA 139
+ I+Q L G G + LD G +LF+A+ D+LR
Sbjct: 76 PPEV-IQQYLSGGMCGYDLDGCPVWYDIIGPLDAKG----LLFSASKQ-------DLLRT 123
Query: 140 ILLSLEAMIEDPELQ-------VNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFP 192
+ E ++++ Q V +I D K K + ++++P
Sbjct: 124 KMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYP 183
Query: 193 ARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNS-LHQLIHPEILPSEFGG 251
+ V P Y +I+PFL E TRK+I + G N L + I P+ +P E+GG
Sbjct: 184 ETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
Query: 252 MLPPYDMGTWARTLLDHEYDDDSEYNV 278
+ D ++ +++ D +Y V
Sbjct: 244 TMTDPDGNPKCKSKINYGGDIPRKYYV 270
>gi|7110715 SEC14-like 2 isoform 1 [Homo sapiens]
Length = 403
Score = 60.8 bits (146), Expect = 2e-09
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 32 QEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQQ-NLDMFKSFK 90
+ V+D++ P+ DD F+LR+LRAR F ++ +L ++ E+R+Q ++D S++
Sbjct: 21 ENVQDVLPALPN-----PDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQ 75
Query: 91 ATDPGIKQALKDGFPGG-----------LANLDHYGRKILVLFAANWDQSRYTLVDILRA 139
+ I+Q L G G + LD G +LF+A+ D+LR
Sbjct: 76 PPEV-IQQYLSGGMCGYDLDGCPVWYDIIGPLDAKG----LLFSASKQ-------DLLRT 123
Query: 140 ILLSLEAMIEDPELQ-------VNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFP 192
+ E ++++ Q V +I D K K + ++++P
Sbjct: 124 KMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYP 183
Query: 193 ARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNS-LHQLIHPEILPSEFGG 251
+ V P Y +I+PFL E TRK+I + G N L + I P+ +P E+GG
Sbjct: 184 ETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243
Query: 252 MLPPYDMGTWARTLLDHEYDDDSEYNV 278
+ D ++ +++ D +Y V
Sbjct: 244 TMTDPDGNPKCKSKINYGGDIPRKYYV 270
>gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
sapiens]
Length = 397
Score = 60.5 bits (145), Expect = 2e-09
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 21/244 (8%)
Query: 26 TLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDM 85
+L Q + ++D++ P+ DD F+LR+LRAR F ++ +L ++ E+R+Q D+
Sbjct: 15 SLAQFRENIQDVLSALPN-----PDDYFLLRWLRARSFDLQKSEDMLRKHMEFRKQQ-DL 68
Query: 86 FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSRYTL----VDILRAIL 141
P + + G+ D G + + D L ++LR
Sbjct: 69 ANILAWQPPEVVRLYN---ANGICGHDGEGSPVWYHIVGSLDPKGLLLSASKQELLRDSF 125
Query: 142 LSLEAMIEDPELQ-------VNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPAR 194
S E ++ + ELQ V + I + K +L+ L+ ++P
Sbjct: 126 RSCELLLRECELQSQKLGKKVEKIIAIFGLEGLGLRDLWKPGIELLQEFFSALEANYPEI 185
Query: 195 FGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNN-LNSLHQLIHPEILPSEFGGML 253
+ V P + +++ ++ E+TR+++ + G+N L + I P+ LP EFGG +
Sbjct: 186 LKSLIVVRAPKLFAVAFNLVKSYMSEETRRKVVILGDNWKQELTKFISPDQLPVEFGGTM 245
Query: 254 PPYD 257
D
Sbjct: 246 TDPD 249
>gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
sapiens]
Length = 397
Score = 58.9 bits (141), Expect = 6e-09
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 21/244 (8%)
Query: 26 TLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDM 85
+L Q + ++D++ P+ DD F+LR+L+AR F ++ +L ++ E+R+Q D+
Sbjct: 15 SLAQFRENIQDVLSALPN-----PDDYFLLRWLQARSFDLQKSEDMLRKHMEFRKQQ-DL 68
Query: 86 FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSRYTL----VDILRAIL 141
P + + G+ D G + + D L ++LR
Sbjct: 69 ANILAWQPPEVVRLYN---ANGICGHDGEGSPVWYHIVGSLDPKGLLLSASKQELLRDSF 125
Query: 142 LSLEAMIEDPELQ-------VNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPAR 194
S E ++ + ELQ V + I + K +L+ L+ ++P
Sbjct: 126 RSCELLLRECELQSQKLGKRVEKIIAIFGLEGLGLRDLWKPGIELLQEFFSALEANYPEI 185
Query: 195 FGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNN-LNSLHQLIHPEILPSEFGGML 253
+ V P + +++ ++ E+TR+++ + G+N L + I P+ LP EFGG +
Sbjct: 186 LKSLIVVRAPKLFAVAFNLVKSYMSEETRRKVVILGDNWKQELTKFISPDQLPVEFGGTM 245
Query: 254 PPYD 257
D
Sbjct: 246 TDPD 249
>gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
sapiens]
Length = 397
Score = 58.9 bits (141), Expect = 6e-09
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 21/244 (8%)
Query: 26 TLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDM 85
+L Q + ++D++ P+ DD F+LR+L+AR F ++ +L ++ E+R+Q D+
Sbjct: 15 SLAQFRENIQDVLSALPN-----PDDYFLLRWLQARSFDLQKSEDMLRKHMEFRKQQ-DL 68
Query: 86 FKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAANWDQSRYTL----VDILRAIL 141
P + + G+ D G + + D L ++LR
Sbjct: 69 ANILAWQPPEVVRLYN---ANGICGHDGEGSPVWYHIVGSLDPKGLLLSASKQELLRDSF 125
Query: 142 LSLEAMIEDPELQ-------VNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPAR 194
S E ++ + ELQ V + I + K +L+ L+ ++P
Sbjct: 126 RSCELLLRECELQSQKLGKRVEKIIAIFGLEGLGLRDLWKPGIELLQEFFSALEANYPEI 185
Query: 195 FGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNN-LNSLHQLIHPEILPSEFGGML 253
+ V P + +++ ++ E+TR+++ + G+N L + I P+ LP EFGG +
Sbjct: 186 LKSLIVVRAPKLFAVAFNLVKSYMSEETRRKVVILGDNWKQELTKFISPDQLPVEFGGTM 245
Query: 254 PPYD 257
D
Sbjct: 246 TDPD 249
>gi|150010661 SEC14-like 5 [Homo sapiens]
Length = 696
Score = 58.5 bits (140), Expect = 8e-09
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D ILRFLRA FH +A +L Q +R+Q+ P + L++ + GG
Sbjct: 264 DEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPAL---LEEFYAGGWHY 320
Query: 111 LDHYGRKILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNG-----------FV 159
D GR + +L D A+L + ++ E+ + + G +
Sbjct: 321 QDIDGRPLYILRLGQMDTKGLMKAVGEEALLRHVLSVNEEGQKRCEGSTRQLGRPISSWT 380
Query: 160 LIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
++D + + L IE ++D++P G + V P L+T+I PF+
Sbjct: 381 CLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPFIN 440
Query: 220 EKTRKRIFLH-GNNL---NSLHQLIHPEILPSEFGG 251
E TR++ ++ G+N L + E++P GG
Sbjct: 441 ENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGG 476
>gi|4506301 protein tyrosine phosphatase, non-receptor type 9 [Homo
sapiens]
Length = 593
Score = 58.2 bits (139), Expect = 1e-08
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 55 LRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHY 114
++FL ARKF A L Y E R++ + K + ++ + G L D
Sbjct: 48 VKFLMARKFDVLRAIELFHSYRETRRK--EGIVKLKPHEEPLRSEILSGKFTILNVRDPT 105
Query: 115 GRKILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIID-----WSNFTF 169
G I + A + +L+A+ L+ ++ E Q NG V I D ++NF
Sbjct: 106 GASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANFEL 165
Query: 170 KQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLH 229
K+ + L+ +FPAR + V P + Y++I LK+K R+RI +
Sbjct: 166 DLGKKV--------LNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQI- 216
Query: 230 GNNLNSLHQLIHPEILPSEFGGMLPPYDMGTW 261
+ + Q + E LP GG + D+ TW
Sbjct: 217 -LKTSEVTQHLPRECLPENLGGYV-KIDLATW 246
>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
Length = 681
Score = 57.4 bits (137), Expect = 2e-08
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D ILRFLRAR F+ +A ++ Q +R+Q+ + T P Q L+D + GG +
Sbjct: 243 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPP---QVLQDYYAGGWHH 299
Query: 111 LDHYGRKILVLFAANWDQSRYTLV----DILRAILLSLEAMIEDPELQ-------VNGFV 159
D GR + VL D +LR +L E + E ++ +
Sbjct: 300 HDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWT 359
Query: 160 LIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
++D + + L IE ++ ++P G + + P L+T++ PF+
Sbjct: 360 CLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFID 419
Query: 220 EKTRKRIFLHGNN----LNSLHQLIHPEILPSEFGG 251
+ TR++ ++ N L I EI+P G
Sbjct: 420 DNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSG 455
>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 57.4 bits (137), Expect = 2e-08
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D ILRFLRAR F+ +A ++ Q +R+Q+ + T P Q L+D + GG +
Sbjct: 277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPP---QVLQDYYAGGWHH 333
Query: 111 LDHYGRKILVLFAANWDQSRYTLV----DILRAILLSLEAMIEDPELQ-------VNGFV 159
D GR + VL D +LR +L E + E ++ +
Sbjct: 334 HDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWT 393
Query: 160 LIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
++D + + L IE ++ ++P G + + P L+T++ PF+
Sbjct: 394 CLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFID 453
Query: 220 EKTRKRIFLHGNN----LNSLHQLIHPEILPSEFGG 251
+ TR++ ++ N L I EI+P G
Sbjct: 454 DNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSG 489
>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 57.4 bits (137), Expect = 2e-08
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D ILRFLRAR F+ +A ++ Q +R+Q+ + T P Q L+D + GG +
Sbjct: 277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPP---QVLQDYYAGGWHH 333
Query: 111 LDHYGRKILVLFAANWDQSRYTLV----DILRAILLSLEAMIEDPELQ-------VNGFV 159
D GR + VL D +LR +L E + E ++ +
Sbjct: 334 HDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWT 393
Query: 160 LIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
++D + + L IE ++ ++P G + + P L+T++ PF+
Sbjct: 394 CLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFID 453
Query: 220 EKTRKRIFLHGNN----LNSLHQLIHPEILPSEFGG 251
+ TR++ ++ N L I EI+P G
Sbjct: 454 DNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSG 489
>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
Length = 719
Score = 57.4 bits (137), Expect = 2e-08
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D ILRFLRAR F+ +A ++ Q +R+Q+ + T P Q L+D + GG +
Sbjct: 277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPP---QVLQDYYAGGWHH 333
Query: 111 LDHYGRKILVLFAANWDQSRYTLV----DILRAILLSLEAMIEDPELQ-------VNGFV 159
D GR + VL D +LR +L E + E ++ +
Sbjct: 334 HDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWT 393
Query: 160 LIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
++D + + L IE ++ ++P G + + P L+T++ PF+
Sbjct: 394 CLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFID 453
Query: 220 EKTRKRIFLHGNN----LNSLHQLIHPEILPSEFGG 251
+ TR++ ++ N L I EI+P G
Sbjct: 454 DNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSG 489
>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 57.4 bits (137), Expect = 2e-08
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 51 DAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLAN 110
D ILRFLRAR F+ +A ++ Q +R+Q+ + T P Q L+D + GG +
Sbjct: 277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPP---QVLQDYYAGGWHH 333
Query: 111 LDHYGRKILVLFAANWDQSRYTLV----DILRAILLSLEAMIEDPELQ-------VNGFV 159
D GR + VL D +LR +L E + E ++ +
Sbjct: 334 HDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWT 393
Query: 160 LIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLK 219
++D + + L IE ++ ++P G + + P L+T++ PF+
Sbjct: 394 CLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFID 453
Query: 220 EKTRKRIFLHGNN----LNSLHQLIHPEILPSEFGG 251
+ TR++ ++ N L I EI+P G
Sbjct: 454 DNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSG 489
>gi|228008343 BCL2/adenovirus E1B 19kD interacting protein like
isoform b [Homo sapiens]
Length = 275
Score = 34.7 bits (78), Expect = 0.12
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 64 HHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFA 123
HH+ FR+ R+Q +DM +P K G+ G G ++LFA
Sbjct: 94 HHWRVFRMGP-----REQRVDM----TVIEPYKKVLSHGGYHGD-------GLNAVILFA 137
Query: 124 ANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP-SMLRL 182
+ + R ++ + + M+ EL V L++ S T + +++ P S +R
Sbjct: 138 SCY-LPRSSIPNYTYVMEHLFRYMVGTLELLVAENYLLVHLSGGTSR--AQVPPLSWIRQ 194
Query: 183 AIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEK-TRKRIFLHGNNLNSLHQLI 240
L + V+ WY+ A ++RPF+ K TRK FL ++L L QLI
Sbjct: 195 CYRTLDRRLRKNLRALVVVHATWYVKAFLALLRPFISSKFTRKIRFL--DSLGELAQLI 251
>gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like
isoform a [Homo sapiens]
Length = 357
Score = 34.7 bits (78), Expect = 0.12
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 64 HHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFA 123
HH+ FR+ R+Q +DM +P K G+ G G ++LFA
Sbjct: 176 HHWRVFRMGP-----REQRVDM----TVIEPYKKVLSHGGYHGD-------GLNAVILFA 219
Query: 124 ANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTP-SMLRL 182
+ + R ++ + + M+ EL V L++ S T + +++ P S +R
Sbjct: 220 SCY-LPRSSIPNYTYVMEHLFRYMVGTLELLVAENYLLVHLSGGTSR--AQVPPLSWIRQ 276
Query: 183 AIEGLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEK-TRKRIFLHGNNLNSLHQLI 240
L + V+ WY+ A ++RPF+ K TRK FL ++L L QLI
Sbjct: 277 CYRTLDRRLRKNLRALVVVHATWYVKAFLALLRPFISSKFTRKIRFL--DSLGELAQLI 333
>gi|168480080 BCL2/adenovirus E1B 19kD interacting protein 2 [Homo
sapiens]
Length = 435
Score = 30.0 bits (66), Expect = 2.9
Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 27/169 (15%)
Query: 90 KATDPGIKQALKDGFPGGLANLDHYGRKILVLFA------ANWDQSRYTLVDILRAILLS 143
KA +P K G+ G G +V+FA ++ RY + ++ + ++ +
Sbjct: 266 KAIEPYKKVISHGGYYGD-------GLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGT 318
Query: 144 LEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQ 203
LE ++ + N ++ ++ + K S LR + + + V+
Sbjct: 319 LELLVAE-----NYMIVYLNGATTRRKMPSL---GWLRKCYQQIDRRLRKNLKSLIIVHP 370
Query: 204 PWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEILPSEFGGM 252
W+I L V RPF+ K ++I + NL L E++P E+ G+
Sbjct: 371 SWFIRTLLAVTRPFISSKFSQKI-RYVFNLAEL-----AELVPMEYVGI 413
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 30.0 bits (66), Expect = 2.9
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 11 ETLEKARLELNENPDT---LHQDIQEVRDMV 38
E LEKA+LEL E DT LHQ +Q+ +++
Sbjct: 1373 EQLEKAKLELEEAQDTVSNLHQQVQDRNEVI 1403
>gi|169808399 prenyl diphosphate synthase, subunit 2 [Homo sapiens]
Length = 399
Score = 29.6 bits (65), Expect = 3.8
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 133 LVDILRAILLSLEAMI-----EDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGL 187
+V++L + L+ L + E + + I W TF L + A+E
Sbjct: 211 VVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELA 270
Query: 188 QDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEIL 245
+ + + H + + ++PF+KEKT + NLNS ++H E L
Sbjct: 271 KHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTSDSMTF---NLNSAPVVLHQEFL 325
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,327,517
Number of Sequences: 37866
Number of extensions: 527086
Number of successful extensions: 1391
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1341
Number of HSP's gapped (non-prelim): 26
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.