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Search of human proteins with 71774197
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71774197 ubiquitin specific protease 47 [Homo sapiens]
(1287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71774197 ubiquitin specific protease 47 [Homo sapiens] 2588 0.0
gi|150378533 ubiquitin specific peptidase 7 [Homo sapiens] 184 6e-46
gi|41055953 ubiquitin thioesterase 40 [Homo sapiens] 160 1e-38
gi|76257392 ubiquitin specific protease 48 isoform b [Homo sapiens] 153 1e-36
gi|52630449 ubiquitin specific protease 48 isoform a [Homo sapiens] 153 1e-36
gi|149192845 ubiquitin specific protease 24 [Homo sapiens] 146 1e-34
gi|32313610 ubiquitin specific protease 18 [Homo sapiens] 144 4e-34
gi|239757637 PREDICTED: ubiquitin specific peptidase 41 [Homo sa... 140 6e-33
gi|239746654 PREDICTED: ubiquitin specific protease 41 [Homo sap... 139 1e-32
gi|74319833 ubiquitin specific protease 9, Y-linked [Homo sapiens] 138 4e-32
gi|110347427 ubiquitin specific protease 34 [Homo sapiens] 132 2e-30
gi|169215723 PREDICTED: ubiquitin specific peptidase 41 [Homo sa... 130 1e-29
gi|145309311 ubiquitin specific protease 9, X-linked isoform 4 [... 129 2e-29
gi|145309309 ubiquitin specific protease 9, X-linked isoform 3 [... 129 2e-29
gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 99 2e-20
gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens] 97 8e-20
gi|239742285 PREDICTED: hypothetical protein XP_002342486 [Homo ... 92 4e-18
gi|239742291 PREDICTED: hypothetical protein XP_002342477 [Homo ... 89 2e-17
gi|239742278 PREDICTED: hypothetical protein XP_002342472 [Homo ... 89 2e-17
gi|239742289 PREDICTED: hypothetical protein XP_002342476 [Homo ... 89 3e-17
gi|197116355 ubiquitin specific peptidase 46 isoform 2 [Homo sap... 86 2e-16
gi|31377709 ubiquitin specific peptidase 46 isoform 1 [Homo sapi... 86 2e-16
gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] 85 4e-16
gi|153792150 deubiquitinating enzyme 3 [Homo sapiens] 85 5e-16
gi|169172880 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... 84 1e-15
gi|169172882 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17... 83 1e-15
gi|169217654 PREDICTED: similar to deubiquitinating enzyme DUB1 ... 82 3e-15
gi|239758075 PREDICTED: similar to deubiquitinating enzyme DUB1 ... 82 4e-15
gi|239742297 PREDICTED: hypothetical protein XP_002342480 [Homo ... 82 4e-15
gi|239742287 PREDICTED: hypothetical protein XP_002342475 [Homo ... 82 4e-15
>gi|71774197 ubiquitin specific protease 47 [Homo sapiens]
Length = 1287
Score = 2588 bits (6709), Expect = 0.0
Identities = 1287/1287 (100%), Positives = 1287/1287 (100%)
Query: 1 MVPGEENQLVPKEAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEQPQILLEDSSAGEDS 60
MVPGEENQLVPKEAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEQPQILLEDSSAGEDS
Sbjct: 1 MVPGEENQLVPKEAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEQPQILLEDSSAGEDS 60
Query: 61 VHDRFIGPLPREGSGGSTSDYVSQSYSYSSILNKSETGYVGLVNQAMTCYLNSLLQTLFM 120
VHDRFIGPLPREGSGGSTSDYVSQSYSYSSILNKSETGYVGLVNQAMTCYLNSLLQTLFM
Sbjct: 61 VHDRFIGPLPREGSGGSTSDYVSQSYSYSSILNKSETGYVGLVNQAMTCYLNSLLQTLFM 120
Query: 121 TPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAW 180
TPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAW
Sbjct: 121 TPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAW 180
Query: 181 QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIP 240
QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIP
Sbjct: 181 QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIP 240
Query: 241 LVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTL 300
LVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTL
Sbjct: 241 LVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTL 300
Query: 301 QLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSD 360
QLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSD
Sbjct: 301 QLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSD 360
Query: 361 QMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAAGGHYYACI 420
QMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAAGGHYYACI
Sbjct: 361 QMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAAGGHYYACI 420
Query: 421 KSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPAR 480
KSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPAR
Sbjct: 421 KSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPAR 480
Query: 481 NAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPTKQVMMENKLEV 540
NAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPTKQVMMENKLEV
Sbjct: 481 NAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPTKQVMMENKLEV 540
Query: 541 HKDKTLKEAVEMAYKMMDLEEVIPLDCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVK 600
HKDKTLKEAVEMAYKMMDLEEVIPLDCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVK
Sbjct: 541 HKDKTLKEAVEMAYKMMDLEEVIPLDCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVK 600
Query: 601 STYMFDLLLETRKPDQVFQSYKPGEVMVKVHVVDLKAESVAAPITVRAYLNQTVTEFKQL 660
STYMFDLLLETRKPDQVFQSYKPGEVMVKVHVVDLKAESVAAPITVRAYLNQTVTEFKQL
Sbjct: 601 STYMFDLLLETRKPDQVFQSYKPGEVMVKVHVVDLKAESVAAPITVRAYLNQTVTEFKQL 660
Query: 661 ISKAIHLPAETMRIVLERCYNDLRLLSVSSKTLKAEGFFRSNKVFVESSETLDYQMAFAD 720
ISKAIHLPAETMRIVLERCYNDLRLLSVSSKTLKAEGFFRSNKVFVESSETLDYQMAFAD
Sbjct: 661 ISKAIHLPAETMRIVLERCYNDLRLLSVSSKTLKAEGFFRSNKVFVESSETLDYQMAFAD 720
Query: 721 SHLWKLLDRHANTIRLFVLLPEQSPVSYSKRTAYQKAGGDSGNVDDDCERVKGPVGSLKS 780
SHLWKLLDRHANTIRLFVLLPEQSPVSYSKRTAYQKAGGDSGNVDDDCERVKGPVGSLKS
Sbjct: 721 SHLWKLLDRHANTIRLFVLLPEQSPVSYSKRTAYQKAGGDSGNVDDDCERVKGPVGSLKS 780
Query: 781 VEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSASVDNRELEQ 840
VEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSASVDNRELEQ
Sbjct: 781 VEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSASVDNRELEQ 840
Query: 841 HIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSH 900
HIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSH
Sbjct: 841 HIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSH 900
Query: 901 SITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSGEG 960
SITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSGEG
Sbjct: 901 SITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSGEG 960
Query: 961 HKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSDDN 1020
HKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSDDN
Sbjct: 961 HKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSDDN 1020
Query: 1021 KITIRLGRALKKGEYRVKVYQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELIPQLREQCG 1080
KITIRLGRALKKGEYRVKVYQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELIPQLREQCG
Sbjct: 1021 KITIRLGRALKKGEYRVKVYQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELIPQLREQCG 1080
Query: 1081 LELSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMKSMSQLAVL 1140
LELSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMKSMSQLAVL
Sbjct: 1081 LELSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMKSMSQLAVL 1140
Query: 1141 SRRWKPSEMKLDPFQEVVLESSSVDELREKLSEISGIPLDDIEFAKGRGTFPCDISVLDI 1200
SRRWKPSEMKLDPFQEVVLESSSVDELREKLSEISGIPLDDIEFAKGRGTFPCDISVLDI
Sbjct: 1141 SRRWKPSEMKLDPFQEVVLESSSVDELREKLSEISGIPLDDIEFAKGRGTFPCDISVLDI 1200
Query: 1201 HQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQKTGH 1260
HQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQKTGH
Sbjct: 1201 HQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQKTGH 1260
Query: 1261 RVTYSPRKEKALKIYLDGAPNKDLTQD 1287
RVTYSPRKEKALKIYLDGAPNKDLTQD
Sbjct: 1261 RVTYSPRKEKALKIYLDGAPNKDLTQD 1287
>gi|150378533 ubiquitin specific peptidase 7 [Homo sapiens]
Length = 1102
Score = 184 bits (466), Expect = 6e-46
Identities = 107/249 (42%), Positives = 146/249 (58%), Gaps = 10/249 (4%)
Query: 93 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF 152
+K TGYVGL NQ TCY+NSLLQTLF T + R A+Y E +D S+P LQR+F
Sbjct: 207 SKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEG--DDSSKSVPLALQRVF 264
Query: 153 VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL 212
LQ S K + T +T+SFGW++ +++ QHDVQELCRV+ D +E K K T I +L
Sbjct: 265 YELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKL 323
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
++GK+ Y++C E Y R + Y DI L I+ G F S + ++ E LDG N
Sbjct: 324 FRGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKKNIFESFVD----YVAVEQLDGDN 377
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
+Y + +A KG++FL P +L LQL RF +D T IK+NDR FPE+L + F
Sbjct: 378 KYDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEF 436
Query: 333 IDVEDEKSP 341
+ D K P
Sbjct: 437 LQKTDPKDP 445
Score = 70.5 bits (171), Expect = 1e-11
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 394 KNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQED-IKKTHGGSS 452
K+ Y L +V+VHSG GGHY + D +W F+D VSR T+E+ I+ +GG
Sbjct: 443 KDPANYILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHD 502
Query: 453 GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEV------DEYPEHIKNLVQKERELEE 506
+ TNAYML+Y R +K EV + P+ + +Q+E+ +E
Sbjct: 503 D-----DLSVRHCTNAYMLVY-----IRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEA 552
Query: 507 QEKRQREIERNTCKIKL-----FCLHPTKQVMMENKLEVHKDKTLKEA 549
Q++++R+ ++++ FC H + E K++ K LK +
Sbjct: 553 QKRKERQEAHLYMQVQIVAEDQFCGHQGNDMYDEEKVKYTVFKVLKNS 600
>gi|41055953 ubiquitin thioesterase 40 [Homo sapiens]
Length = 1247
Score = 160 bits (404), Expect = 1e-38
Identities = 93/247 (37%), Positives = 131/247 (53%), Gaps = 15/247 (6%)
Query: 97 TGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYK--------WEFEESEEDPVTSIPYQL 148
T G+ NQ TCYLNSLLQTL TPEFR AL+ +E ++ + V IP QL
Sbjct: 50 TNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQL 109
Query: 149 QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL 208
QRLF L + A T D+T SFGW S+E +QHDVQEL R++F ALE T DL
Sbjct: 110 QRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDL 169
Query: 209 INELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEAL-HAFIQPEI 267
I LY G + + + C EC R + +LD+ + ++ + +E+AL + +++ E+
Sbjct: 170 IYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVK------NVSGLEDALWNMYVEEEV 223
Query: 268 LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEEL 327
D N Y C C + A K + P LT+ L RF+FD+ R K TFP +
Sbjct: 224 FDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRI 283
Query: 328 DMSTFID 334
++ F +
Sbjct: 284 NLKPFCE 290
Score = 30.8 bits (68), Expect = 8.7
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 27/153 (17%)
Query: 422 SFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPARN 481
S S W+ ND V I ++DI++ F +AYML YR R
Sbjct: 454 SISCPHWFDINDSKVQPIREKDIEQ--------------QFQGKESAYMLFYRKSQLQRP 499
Query: 482 AKFLEVDEY--PEHIKNLVQKERELEEQEKRQREIERNTCKIKLF----------CLHP- 528
+ Y P H+ N + + ++ + + NT ++ L LHP
Sbjct: 500 PEARANPRYGVPCHLLNEMDAANIELQTKRAECDSANNTFELHLHLGPQYHFFNGALHPV 559
Query: 529 TKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEE 561
Q L K KTL + + +++++ E
Sbjct: 560 VSQTESVWDLTFDKRKTLGDLRQSIFQLLEFWE 592
>gi|76257392 ubiquitin specific protease 48 isoform b [Homo sapiens]
Length = 485
Score = 153 bits (386), Expect = 1e-36
Identities = 121/457 (26%), Positives = 197/457 (43%), Gaps = 101/457 (22%)
Query: 94 KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEF------------EESEEDPV 141
+ + +VGL N TCY+N+ LQ F+ E R ALY EE + +P
Sbjct: 83 RKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYMLGDGIQEEKDYEPQ 142
Query: 142 TSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQ--- 198
T I LQ LF LLQ S +R I+ + ++ G D+ QQ D QE ++ LE
Sbjct: 143 T-ICEHLQYLFALLQNSNRRYIDPSGFVKALGLDTG---QQQDAQEFSKLFMSLLEDTLS 198
Query: 199 KWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEA 258
K K + +++ + + G+ C +CG E + + ++ L I Q + +
Sbjct: 199 KQKNPDVRNIVQQQFCGEYAYVTVCNQCGRESKLLSKFYELELNI------QGHKQLTDC 252
Query: 259 LHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLN 318
+ F++ E L+G N+YFCE C+ K +A + +R L P L LQL RF FD T H+ KLN
Sbjct: 253 ISEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
Query: 319 DRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICL 378
+ F E LDM ++ E++G + ++S
Sbjct: 313 TYIGFSEILDMEPYV------------------EHKGGSYVYELS--------------- 339
Query: 379 ETNSGTEKISKSGLEKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHVS 437
+V++H G SA GHY A +K +WY FND+ +
Sbjct: 340 ------------------------AVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIE 375
Query: 438 RI--------TQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDE 489
++ +ED+ + S + S NAYML+YRL+ + ++V
Sbjct: 376 KMEGKKLQLGIEEDLAEP-SKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTVQV-- 432
Query: 490 YPEHIKNLVQKERE------LEEQEKRQREIERNTCK 520
P ++ LV ++ +E E R++ +++ K
Sbjct: 433 -PAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAK 468
>gi|52630449 ubiquitin specific protease 48 isoform a [Homo sapiens]
Length = 1035
Score = 153 bits (386), Expect = 1e-36
Identities = 121/457 (26%), Positives = 197/457 (43%), Gaps = 101/457 (22%)
Query: 94 KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEF------------EESEEDPV 141
+ + +VGL N TCY+N+ LQ F+ E R ALY EE + +P
Sbjct: 83 RKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYMLGDGIQEEKDYEPQ 142
Query: 142 TSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQ--- 198
T I LQ LF LLQ S +R I+ + ++ G D+ QQ D QE ++ LE
Sbjct: 143 T-ICEHLQYLFALLQNSNRRYIDPSGFVKALGLDTG---QQQDAQEFSKLFMSLLEDTLS 198
Query: 199 KWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEA 258
K K + +++ + + G+ C +CG E + + ++ L I Q + +
Sbjct: 199 KQKNPDVRNIVQQQFCGEYAYVTVCNQCGRESKLLSKFYELELNI------QGHKQLTDC 252
Query: 259 LHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLN 318
+ F++ E L+G N+YFCE C+ K +A + +R L P L LQL RF FD T H+ KLN
Sbjct: 253 ISEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
Query: 319 DRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICL 378
+ F E LDM ++ E++G + ++S
Sbjct: 313 TYIGFSEILDMEPYV------------------EHKGGSYVYELS--------------- 339
Query: 379 ETNSGTEKISKSGLEKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHVS 437
+V++H G SA GHY A +K +WY FND+ +
Sbjct: 340 ------------------------AVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIE 375
Query: 438 RI--------TQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDE 489
++ +ED+ + S + S NAYML+YRL+ + ++V
Sbjct: 376 KMEGKKLQLGIEEDLAEP-SKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTVQV-- 432
Query: 490 YPEHIKNLVQKERE------LEEQEKRQREIERNTCK 520
P ++ LV ++ +E E R++ +++ K
Sbjct: 433 -PAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAK 468
>gi|149192845 ubiquitin specific protease 24 [Homo sapiens]
Length = 2460
Score = 146 bits (369), Expect = 1e-34
Identities = 112/395 (28%), Positives = 177/395 (44%), Gaps = 49/395 (12%)
Query: 93 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF 152
++S +G+VGL N TCY+N++ Q L+M P +L ++ ++P S+ YQ+Q LF
Sbjct: 1522 SRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLS--VDDDTDNPDDSVFYQVQSLF 1579
Query: 153 VLLQTSKKRAIETTDVTRSFGWDSSEAW--QQHDVQELCRVMFDALEQKWKQTEQADLIN 210
L SK + + + F + E + +Q D E + D +++ K+ + +
Sbjct: 1580 GHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRDQIFK 1639
Query: 211 ELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDG 270
+QG D C +C + R + ++ + L + + S+E +L F++ E+L+G
Sbjct: 1640 NTFQGIYSDQKICKDCPHRYEREEAFMALNLGVT------SCQSLEISLDQFVRGEVLEG 1693
Query: 271 PNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMS 330
N Y+CE+CK+K K P +L + L RF FD+ + IK ++++ FP L+M
Sbjct: 1694 SNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNM- 1752
Query: 331 TFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKS 390
P T S G D S N VD+G G K
Sbjct: 1753 ---------EPYTVS---------GMARQDSSSEVGENGRSVDQG------GGGSPRKKV 1788
Query: 391 GLEKNSLIYELFSVMVHSGSAAGGHYYACIK---SFSDEQWYSFNDQHVSRITQEDIK-- 445
L +N YEL V+VHSG A GHYY+ IK +WY FND + D
Sbjct: 1789 ALTEN---YELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLE 1845
Query: 446 -KTHGGSSGSRGY-----YSSAFASSTNAYMLIYR 474
+ GG + Y Y+ NAYML Y+
Sbjct: 1846 YECFGGEYRPKVYDQTNPYTDVRRRYWNAYMLFYQ 1880
>gi|32313610 ubiquitin specific protease 18 [Homo sapiens]
Length = 372
Score = 144 bits (364), Expect = 4e-34
Identities = 96/376 (25%), Positives = 166/376 (44%), Gaps = 61/376 (16%)
Query: 98 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQT 157
G VGL N TC LNSL+Q M +F L + ++ S+P+Q+ L +Q
Sbjct: 53 GLVGLHNIGQTCCLNSLIQVFVMNVDFTRILKRITVPRGADEQRRSVPFQMLLLLEKMQD 112
Query: 158 SKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKL 217
S+++A+ ++ + + QHD +L +++ ++ + + + LY ++
Sbjct: 113 SRQKAVRPLELAYCLQKCNVPLFVQHDAAQLYLKLWNLIKDQITDVHLVERLQALYTIRV 172
Query: 218 KDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCE 277
KD + C++C E R + L +PL + S+ ++E+ALH F QP L ++ FCE
Sbjct: 173 KDSLICVDCAMESSRNSSMLTLPLSLFDV-DSKPLKTLEDALHCFFQPRELSSKSKCFCE 231
Query: 278 RCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVED 337
C KK ++ L+ H P LT+ L RF + K+ + FP+ LD S + ++
Sbjct: 232 NCGKKTRGKQVLKLTHLPQTLTIHLMRFSIRNSQTR--KICHSLYFPQSLDFSQILPMKR 289
Query: 338 EKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSL 397
E SC +++ S
Sbjct: 290 E-----------------SCDAEEQSGG-------------------------------- 300
Query: 398 IYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGY 457
YELF+V+ H G A GHY I++ D +W+ FND ++ ++ EDI+ T+G +
Sbjct: 301 QYELFAVIAHVGMADSGHYCVYIRNAVDGKWFCFNDSNICLVSWEDIQCTYGNPN----- 355
Query: 458 YSSAFASSTNAYMLIY 473
+ AY+L+Y
Sbjct: 356 ----YHWQETAYLLVY 367
>gi|239757637 PREDICTED: ubiquitin specific peptidase 41 [Homo
sapiens]
Length = 344
Score = 140 bits (354), Expect = 6e-33
Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 52/366 (14%)
Query: 84 QSYSYSSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTS 143
Q +S I G VGL N TC LNSL+Q M +F L + ++ S
Sbjct: 5 QLFSVPKISWDYRHGLVGLHNIGQTCCLNSLIQVFVMNVDFARILKRITVPRGADEQRRS 64
Query: 144 IPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT 203
+P+Q+ L +Q S+++A+ ++ + + QHD +L +++ ++ +
Sbjct: 65 VPFQMLLLLEKMQDSRQKAVWPLELAYCLQKYNVPLFVQHDAAQLYLKLWNLIKDQIADV 124
Query: 204 EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFI 263
+ + LY ++KD + CL+C E R + L + L S+ ++E+ALH F
Sbjct: 125 HLVERLQALYMIRVKDSLICLDCAMESSRNSSMLTLRLSFFDV-DSKPLKTLEDALHCFF 183
Query: 264 QPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTF 323
QP L ++ FCE C KK ++ L+ H P LT+ L RF + K+ + F
Sbjct: 184 QPRELSSKSKCFCENCGKKTRGKQVLKLTHLPQTLTIHLMRFSIRNSQTR--KICHSLYF 241
Query: 324 PEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSG 383
P+ LD S + ++ E SC +++ S
Sbjct: 242 PQSLDFSQILPMKRE-----------------SCDAEEQSGG------------------ 266
Query: 384 TEKISKSGLEKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQED 443
YELF+V+ H G A GHY I+S D +W+ FND ++ ++ ED
Sbjct: 267 --------------QYELFAVIAHVGMADSGHYCVYIRSAVDGKWFCFNDSNICLVSWED 312
Query: 444 IKKTHG 449
I+ T+G
Sbjct: 313 IQCTYG 318
>gi|239746654 PREDICTED: ubiquitin specific protease 41 [Homo
sapiens]
Length = 347
Score = 139 bits (351), Expect = 1e-32
Identities = 92/352 (26%), Positives = 156/352 (44%), Gaps = 52/352 (14%)
Query: 98 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQT 157
G VGL N TC LNSL+Q M +F L + ++ S+P+Q+ L +Q
Sbjct: 42 GLVGLHNIGQTCCLNSLIQVFVMNVDFARILKRITVPRGADEQRRSVPFQMLLLLEKMQD 101
Query: 158 SKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKL 217
S+++A+ ++ + + QHD +L +++ ++ + + + LY ++
Sbjct: 102 SRQKAVWPLELAYCLQKYNVPLFVQHDAAQLYLKLWNLIKDQIADVHLVERLQALYMIRM 161
Query: 218 KDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCE 277
KD + CL+C E R + L + L S+ ++E+ALH F QP L ++ FCE
Sbjct: 162 KDSLICLDCAMESSRNSSMLTLRLSFFDV-DSKPLKTLEDALHCFFQPRELSSKSKCFCE 220
Query: 278 RCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVED 337
C KK ++ L+ H P LT+ L RF + K+ + FP+ LD S + ++
Sbjct: 221 NCGKKTRGKQVLKLTHLPQTLTIHLMRFSIRNSQTR--KICHSLYFPQSLDFSQILPMKR 278
Query: 338 EKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSL 397
E SC +++ S
Sbjct: 279 E-----------------SCDAEEQSGG-------------------------------- 289
Query: 398 IYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHG 449
YELF+V+ H G A GHY I++ D +W+ FND ++ ++ EDI+ T+G
Sbjct: 290 QYELFAVIAHVGMADSGHYCVYIRNAVDGKWFCFNDSNICLVSWEDIQCTYG 341
>gi|74319833 ubiquitin specific protease 9, Y-linked [Homo sapiens]
Length = 2555
Score = 138 bits (347), Expect = 4e-32
Identities = 136/532 (25%), Positives = 208/532 (39%), Gaps = 114/532 (21%)
Query: 98 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEF----------------EESEEDP- 140
G+VGL N TCY+NS++Q L+M P RN++ E ES DP
Sbjct: 1557 GFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDLHDDMFGDEKQDSESNVDPR 1616
Query: 141 --VTSIPYQLQRLFVLLQTSKKRAIETTD-------------------VTRSFGWDSSEA 179
V P+Q + L +T ++ V R F W
Sbjct: 1617 DDVFGYPHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASQLQYYVPRGF-WKQFRL 1675
Query: 180 W-------QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR 232
W +QHD E + D+L++ K +++++ G D C C +
Sbjct: 1676 WGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAILSKVLGGSFADQKICQGCPHRYEC 1735
Query: 233 IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL 292
+++ + + IR + ++ ++L +I+ ++L+G N Y CE+C KK D K L
Sbjct: 1736 EESFTTLNVDIRNH------QNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIK 1789
Query: 293 HFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAE 352
P +L +QLKRFD+D+ IK ND FP ELDM + V + + ++ +E
Sbjct: 1790 KLPRVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMGPY-TVAGVANLERDNV---NSE 1845
Query: 353 NEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAA 412
NE +Q N ET GT+ Y L V+VHSG A+
Sbjct: 1846 NELIEQKEQSDN--------------ETAGGTK-------------YRLVGVLVHSGQAS 1878
Query: 413 GGHYYACI-----KSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASST- 466
GGHYY+ I K + WY F+D V+ +D ++ G Y F
Sbjct: 1879 GGHYYSYIIQRNGKDDQTDHWYKFDDGDVTECKMDDDEEMKNQCFGGE-YMGEVFDHMMK 1937
Query: 467 -----------NAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIE 515
NAY+L Y D +DE E I+ + + Q IE
Sbjct: 1938 RMSYRRQKRWWNAYILFYEQMD--------MIDEDDEMIRYISELTIARPHQIIMSPAIE 1989
Query: 516 RNTCKIKLFCLHPTKQVMME-----NKLEVHKDKTLKEAVEMAYKMMDLEEV 562
R+ K + +H Q +E KL L A Y + + EE+
Sbjct: 1990 RSVRKQNVKFMHNRLQYSLEYFQFVKKLLTCNGVYLNPAPGQDYLLPEAEEI 2041
>gi|110347427 ubiquitin specific protease 34 [Homo sapiens]
Length = 3546
Score = 132 bits (333), Expect = 2e-30
Identities = 101/401 (25%), Positives = 171/401 (42%), Gaps = 63/401 (15%)
Query: 94 KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFV 153
++E +VGL N TCYL S +Q L+M PE R A++ ++ E + T + +LQ++F
Sbjct: 1888 RAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSEDMKHKTTLL--ELQKMFT 1945
Query: 154 LLQTSKKRAIETTDVTRSFGWDSS--EAWQQHDVQELCRVMFDALEQKWKQTEQADLINE 211
L S+ +A +++ D +Q D+ E + +E+ E + +
Sbjct: 1946 YLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKIEEM--SPELKNTVKS 2003
Query: 212 LYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGP 271
L+ G + + V L+C + + + + + ++ E+L + L+G
Sbjct: 2004 LFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVAD------MKNIYESLDEVTIKDTLEGD 2057
Query: 272 NQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMST 331
N Y C C KK A K F P +L+ R+ F+ TM + K+N +FP LDM
Sbjct: 2058 NMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDM-- 2115
Query: 332 FIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSG 391
+P TE DF E G +++S
Sbjct: 2116 --------TPYTE--------------------DFLMGKS-------ERKEGFKEVSDHS 2140
Query: 392 LEKNSLIYELFSVMVHSGSAAGGHYYACIK------SFSDEQWYSFNDQHVSRITQEDI- 444
+ S Y+L V VH+G+A GGHYY+ I+ ++ + +WY FND V +
Sbjct: 2141 KDSESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQLA 2200
Query: 445 KKTHGGSSGSRGYYS-------SAFASSTNAYMLIYRLKDP 478
+ GG ++ Y S +F + +AYML Y+ +P
Sbjct: 2201 SECFGGEMTTKTYDSVTDKFMDFSFEKTHSAYMLFYKRMEP 2241
>gi|169215723 PREDICTED: ubiquitin specific peptidase 41 [Homo
sapiens]
Length = 346
Score = 130 bits (326), Expect = 1e-29
Identities = 87/339 (25%), Positives = 147/339 (43%), Gaps = 52/339 (15%)
Query: 98 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQT 157
G VGL N TC LNSL+Q M +F L + ++ S+P+Q+ L +Q
Sbjct: 42 GLVGLHNIGQTCCLNSLIQVFVMNVDFARILKRITVPRGADEQRRSVPFQMLLLLEKMQD 101
Query: 158 SKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKL 217
S+++A+ ++ + + QHD +L +++ ++ + + + LY ++
Sbjct: 102 SRQKAVWPLELAYCLQKYNVPLFVQHDAAQLYLKLWNLIKDQIADVHLVERLQALYMIRM 161
Query: 218 KDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCE 277
KD + CL+C E R + L + L S+ ++E+ALH F QP L ++ FCE
Sbjct: 162 KDSLICLDCAMESSRNSSMLTLRLSFFDV-DSKPLKTLEDALHCFFQPRELSSKSKCFCE 220
Query: 278 RCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVED 337
C KK ++ L+ H P LT+ L RF + K+ + FP+ LD S + ++
Sbjct: 221 NCGKKTRGKQVLKLTHLPQTLTIHLMRFSIRNSQTR--KICHSLYFPQSLDFSQILPMKR 278
Query: 338 EKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSL 397
E SC +++ S
Sbjct: 279 E-----------------SCDAEEQSGG-------------------------------- 289
Query: 398 IYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHV 436
YELF+V+ H G A GHY I++ D +W+ FND ++
Sbjct: 290 QYELFAVIAHVGMADSGHYCVYIRNAVDGKWFCFNDSNI 328
>gi|145309311 ubiquitin specific protease 9, X-linked isoform 4 [Homo
sapiens]
Length = 2554
Score = 129 bits (324), Expect = 2e-29
Identities = 132/501 (26%), Positives = 196/501 (39%), Gaps = 110/501 (21%)
Query: 98 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEF----------------EESEEDP- 140
G+VGL N TCY+NS++Q L+M P RN + E ES DP
Sbjct: 1555 GFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPR 1614
Query: 141 --VTSIPYQLQRLFVLLQTSKKRAIETTD-------------------VTRSFGWDSSEA 179
V P Q + L +T ++ V R F W
Sbjct: 1615 DDVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF-WKQFRL 1673
Query: 180 W-------QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR 232
W +QHD E + D+L++ K +++++ G D C C +
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYEC 1733
Query: 233 IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL 292
+++ + + IR + ++ ++L +++ ++L+G N Y CE+C KK D K L
Sbjct: 1734 EESFTTLNVDIRNH------QNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK 1787
Query: 293 HFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSG-A 351
P +L +QLKRFD+D+ IK ND FP ELDM E T +G A
Sbjct: 1788 KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDM--------------EPYTVAGVA 1833
Query: 352 ENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSA 411
+ EG D V+ L S + +G K Y L V+VHSG A
Sbjct: 1834 KLEG--------------DNVNPESQLIQQSEQSESETAGSTK----YRLVGVLVHSGQA 1875
Query: 412 AGGHYYACI--KSFSD---EQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASST 466
+GGHYY+ I ++ D +WY F+D V+ +D ++ G Y F
Sbjct: 1876 SGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE-YMGEVFDHMM 1934
Query: 467 ------------NAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQKERELEEQEKRQREI 514
NAY+L Y D + DE +I L R Q I
Sbjct: 1935 KRMSYRRQKRWWNAYILFYERMDTID-----QDDELIRYISELAITTR--PHQIIMPSAI 1987
Query: 515 ERNTCKIKLFCLHPTKQVMME 535
ER+ K + +H Q ME
Sbjct: 1988 ERSVRKQNVQFMHNRMQYSME 2008
>gi|145309309 ubiquitin specific protease 9, X-linked isoform 3 [Homo
sapiens]
Length = 2570
Score = 129 bits (324), Expect = 2e-29
Identities = 132/501 (26%), Positives = 196/501 (39%), Gaps = 110/501 (21%)
Query: 98 GYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEF----------------EESEEDP- 140
G+VGL N TCY+NS++Q L+M P RN + E ES DP
Sbjct: 1555 GFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPR 1614
Query: 141 --VTSIPYQLQRLFVLLQTSKKRAIETTD-------------------VTRSFGWDSSEA 179
V P Q + L +T ++ V R F W
Sbjct: 1615 DDVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF-WKQFRL 1673
Query: 180 W-------QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR 232
W +QHD E + D+L++ K +++++ G D C C +
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYEC 1733
Query: 233 IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL 292
+++ + + IR + ++ ++L +++ ++L+G N Y CE+C KK D K L
Sbjct: 1734 EESFTTLNVDIRNH------QNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK 1787
Query: 293 HFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSG-A 351
P +L +QLKRFD+D+ IK ND FP ELDM E T +G A
Sbjct: 1788 KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDM--------------EPYTVAGVA 1833
Query: 352 ENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSA 411
+ EG D V+ L S + +G K Y L V+VHSG A
Sbjct: 1834 KLEG--------------DNVNPESQLIQQSEQSESETAGSTK----YRLVGVLVHSGQA 1875
Query: 412 AGGHYYACI--KSFSD---EQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASST 466
+GGHYY+ I ++ D +WY F+D V+ +D ++ G Y F
Sbjct: 1876 SGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGE-YMGEVFDHMM 1934
Query: 467 ------------NAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQKERELEEQEKRQREI 514
NAY+L Y D + DE +I L R Q I
Sbjct: 1935 KRMSYRRQKRWWNAYILFYERMDTID-----QDDELIRYISELAITTR--PHQIIMPSAI 1987
Query: 515 ERNTCKIKLFCLHPTKQVMME 535
ER+ K + +H Q ME
Sbjct: 1988 ERSVRKQNVQFMHNRMQYSME 2008
>gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens]
Length = 1123
Score = 99.4 bits (246), Expect = 2e-20
Identities = 91/347 (26%), Positives = 138/347 (39%), Gaps = 78/347 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TC+LN+ +Q L TP N L E S + +Q V +
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFANSG 182
Query: 161 RAIETTDVTRSFGWDSSEA--WQQHDVQELCRVMFDALEQKW--------KQTEQADLIN 210
AI+ R + Q D E R DA+++ +QT+ L++
Sbjct: 183 NAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQATTLVH 242
Query: 211 ELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDG 270
+++ G L+ V+C C D YLD+ L IR QA A++ AL F++ ++L G
Sbjct: 243 QIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-----QA-ANIVRALELFVKADVLSG 296
Query: 271 PNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMS 330
N Y C +CKKK A K +LTL LKRF K+ + +PE L++
Sbjct: 297 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRF----ANFSGGKITKDVGYPEFLNIR 352
Query: 331 TFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKS 390
++ ++N G
Sbjct: 353 PYM-----------------SQNNG----------------------------------- 360
Query: 391 GLEKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV 436
+ ++Y L++V+VHSG S GHYY +K+ S+ QWY ND V
Sbjct: 361 ----DPVMYGLYAVLVHSGYSCHAGHYYCYVKA-SNGQWYQMNDSLV 402
>gi|32698815 ubiquitin thiolesterase 12 [Homo sapiens]
Length = 370
Score = 97.4 bits (241), Expect = 8e-20
Identities = 97/407 (23%), Positives = 161/407 (39%), Gaps = 102/407 (25%)
Query: 99 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTS 158
Y GLVN TCY NS+LQ L+ FR + ++ + +++ + + L LF + T
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTC---LADLFHSIATQ 94
Query: 159 KKRA--IETTDVTRSFGWDSS--EAWQQHDVQE----LCRVMFDALEQKWKQTEQ----- 205
KK+ I ++ + + Q D E L + D L+++ KQ +Q
Sbjct: 95 KKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLP 154
Query: 206 --------------ADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQA 251
++E++QG L + RCL C + + +LD+ + + +
Sbjct: 155 NGNIDNENNNSTPDPTWVDEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV------EQ 208
Query: 252 FASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTT 311
S+ L F E L +Y+CE C+ K +A K ++ P +L L LKRF +
Sbjct: 209 NTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 268
Query: 312 MHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDG 371
KL+ R+ FP EL + S D +N D
Sbjct: 269 HRYTKLSYRVVFPLELRLF------------------------------NTSGDATNPD- 297
Query: 372 VDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYS 430
+Y+L +V+VH GS GHY A +K S + W
Sbjct: 298 -------------------------RMYDLVAVVVHCGSGPNRGHYIAIVK--SHDFWLL 330
Query: 431 FNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKD 477
F+D V +I + I++ + G S +S + Y+L Y+ +D
Sbjct: 331 FDDDIVEKIDAQAIEEFY-------GLTSDISKNSESGYILFYQSRD 370
>gi|239742285 PREDICTED: hypothetical protein XP_002342486 [Homo
sapiens]
Length = 559
Score = 91.7 bits (226), Expect = 4e-18
Identities = 112/450 (24%), Positives = 177/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDAL--------EQKWKQTEQADLINEL 212
I+ + + +Q D E DA+ +Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKRF D T K++ + +PE LDM +
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS-DVTGN---KIDKNVQYPECLDMKLY 306
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
+ +TNSG
Sbjct: 307 MS--------------------------------------------QTNSG--------- 313
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 314 ---PLVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|239742291 PREDICTED: hypothetical protein XP_002342477 [Homo
sapiens]
Length = 530
Score = 89.4 bits (220), Expect = 2e-17
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDAL--------EQKWKQTEQADLINEL 212
I+ + + +Q D E DA+ +Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKRF D T K+ + +PE LDM +
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS-DVTGN---KIAKNVQYPECLDMQPY 306
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
+ +TN+G
Sbjct: 307 MS--------------------------------------------QTNTG--------- 313
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 314 ---PLVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|239742278 PREDICTED: hypothetical protein XP_002342472 [Homo
sapiens]
Length = 530
Score = 89.4 bits (220), Expect = 2e-17
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDAL--------EQKWKQTEQADLINEL 212
I+ + + +Q D E DA+ +Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKRF D T K+ + +PE LDM +
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS-DVTGN---KIAKNVQYPECLDMQPY 306
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
+ +TN+G
Sbjct: 307 MS--------------------------------------------QTNTG--------- 313
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 314 ---PLVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|239742289 PREDICTED: hypothetical protein XP_002342476 [Homo
sapiens]
Length = 530
Score = 89.0 bits (219), Expect = 3e-17
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDAL--------EQKWKQTEQADLINEL 212
I+ + + +Q D E DA+ +Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKRF D T K+ + +PE LDM +
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS-DVTGN---KIAKNVQYPECLDMQPY 306
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
+ +TN+G
Sbjct: 307 MS--------------------------------------------QTNTG--------- 313
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 314 ---PLVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|197116355 ubiquitin specific peptidase 46 isoform 2 [Homo
sapiens]
Length = 359
Score = 86.3 bits (212), Expect = 2e-16
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 99 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTS 158
Y GLVN TCY NS+LQ L+ FR + ++ ++ +++ + + L LF + T
Sbjct: 27 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTC---LADLFHSIATQ 83
Query: 159 KKRA--IETTDVTRSFGWDSS--EAWQQHDVQE----LCRVMFDALEQKWKQTEQ----- 205
KK+ I ++ + + Q D E L + D L+++ KQ +Q
Sbjct: 84 KKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK 143
Query: 206 --------------ADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQA 251
++E++QG L + RCL C + + +LD+ + + +
Sbjct: 144 NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV------EQ 197
Query: 252 FASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTT 311
S+ L F E L +Y+CE C K +A+K +R P +L L LKRF +
Sbjct: 198 NTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 257
Query: 312 MHRIKLNDRMTFPEEL 327
KL+ R+ FP EL
Sbjct: 258 HRYTKLSYRVVFPLEL 273
Score = 37.4 bits (85), Expect = 0.093
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 398 IYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRG 456
+Y+L +V+VH GS GHY +KS W F+D V +I + I++ + G
Sbjct: 288 MYDLVAVVVHCGSGPNRGHYITIVKSHG--FWLLFDDDIVEKIDAQAIEEFY-------G 338
Query: 457 YYSSAFASSTNAYMLIYRLKD 477
S +S + Y+L Y+ ++
Sbjct: 339 LTSDISKNSESGYILFYQSRE 359
>gi|31377709 ubiquitin specific peptidase 46 isoform 1 [Homo
sapiens]
Length = 366
Score = 86.3 bits (212), Expect = 2e-16
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 99 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTS 158
Y GLVN TCY NS+LQ L+ FR + ++ ++ +++ + + L LF + T
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTC---LADLFHSIATQ 90
Query: 159 KKRA--IETTDVTRSFGWDSS--EAWQQHDVQE----LCRVMFDALEQKWKQTEQ----- 205
KK+ I ++ + + Q D E L + D L+++ KQ +Q
Sbjct: 91 KKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK 150
Query: 206 --------------ADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQA 251
++E++QG L + RCL C + + +LD+ + + +
Sbjct: 151 NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV------EQ 204
Query: 252 FASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTT 311
S+ L F E L +Y+CE C K +A+K +R P +L L LKRF +
Sbjct: 205 NTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 264
Query: 312 MHRIKLNDRMTFPEEL 327
KL+ R+ FP EL
Sbjct: 265 HRYTKLSYRVVFPLEL 280
Score = 37.4 bits (85), Expect = 0.093
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 398 IYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRG 456
+Y+L +V+VH GS GHY +KS W F+D V +I + I++ + G
Sbjct: 295 MYDLVAVVVHCGSGPNRGHYITIVKSHG--FWLLFDDDIVEKIDAQAIEEFY-------G 345
Query: 457 YYSSAFASSTNAYMLIYRLKD 477
S +S + Y+L Y+ ++
Sbjct: 346 LTSDISKNSESGYILFYQSRE 366
>gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 85.1 bits (209), Expect = 4e-16
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 20/243 (8%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TC+ N+ LQ L TP N + E ++ + +Q ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 161 RAI-------ETTDVTRSFGWDSSE---AWQQHDVQELCRVMFDALEQKWKQTEQADLIN 210
I E + R F + + E + Q+ V + + + + + T+ L+
Sbjct: 172 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVC 231
Query: 211 ELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDG 270
+++ G L+ V+CL C D YLDI L I+ A SV +AL F++PE LDG
Sbjct: 232 QIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIK------AAQSVNKALEQFVKPEQLDG 285
Query: 271 PNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMS 330
N Y C +CKK A K +LTL LKRF K+ + +PE LD+
Sbjct: 286 ENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIR 341
Query: 331 TFI 333
++
Sbjct: 342 PYM 344
Score = 37.7 bits (86), Expect = 0.071
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 397 LIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHVS 437
++Y L++V+VH+G + GHY+ IK+ S+ WY ND VS
Sbjct: 352 IVYVLYAVLVHTGFNCHAGHYFCYIKA-SNGLWYQMNDSIVS 392
>gi|153792150 deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 84.7 bits (208), Expect = 5e-16
Identities = 89/346 (25%), Positives = 136/346 (39%), Gaps = 80/346 (23%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY N+ LQ L TP N + E ++ + P + +Q S
Sbjct: 81 GLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + + +Q D E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGCWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVKQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKRF D T KL + +PE L
Sbjct: 251 AYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFS-DVTGN---KLAKNVQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHVS 437
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHDGHYFSYVKA-QEGQWYKMDDAKVT 355
>gi|169172880 PREDICTED: Inactive ubiquitin carboxyl-terminal
hydrolase 17-like protein 8 [Homo sapiens]
Length = 530
Score = 83.6 bits (205), Expect = 1e-15
Identities = 115/468 (24%), Positives = 183/468 (39%), Gaps = 102/468 (21%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCYLN+ LQ L TP N + E ++ + P + +Q S
Sbjct: 81 GLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + + +Q D E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGCWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVKQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A L +L L LKR + + KL + +PE L
Sbjct: 251 AYPCGLCLQRAPASNTLTLHTSAKVLILVLKR----FCDVTGNKLAKNVQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S G+Y++ +K+ + QWY +D V S ++Q+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHNGYYFSYVKA-QEGQWYKMDDAEVTACSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+V E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELK---RDHPCLQVPELDEHLVE 426
Query: 497 LVQKERELEEQEKRQREIERNTCKIKLFCLHPTKQVMMENKLEVHKDK 544
+E L+ + Q E+N K + F + + + N L +H+ K
Sbjct: 427 RATEESTLDHWKFPQ---EQNKMKPE-FNVRKVEGTLPPNVLVIHQSK 470
>gi|169172882 PREDICTED: Ubiquitin carboxyl-terminal hydrolase
17-like protein 3 [Homo sapiens]
Length = 530
Score = 83.2 bits (204), Expect = 1e-15
Identities = 116/472 (24%), Positives = 182/472 (38%), Gaps = 110/472 (23%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY N+ LQ L T N + E ++ + P + +Q S
Sbjct: 81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + S +Q DV E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAS----GFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGCWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVKQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A L +L L LKRF + + KL + +PE L
Sbjct: 251 AYHCGLCLQRAPASNTLTLHTSAKVLILVLKRF----SDVAGNKLAKNVQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHDGHYFSYVKA-QEGQWYKMDDAEVTVCSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIKLFCLHPTKQVMMENKLEVHKDK 544
+E L+ QE+ + + E N K+ + + N L +H+ K
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVGKV--------EGTLPPNALVIHQSK 470
>gi|169217654 PREDICTED: similar to deubiquitinating enzyme DUB1
[Homo sapiens]
Length = 530
Score = 82.0 bits (201), Expect = 3e-15
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + + +Q D E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQADHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKR F T ++I N + +PE L
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKR--FSDVTGNKIAKN--VQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDYPSLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|239758075 PREDICTED: similar to deubiquitinating enzyme DUB1
[Homo sapiens]
Length = 530
Score = 81.6 bits (200), Expect = 4e-15
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + + +Q D E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKR F T ++I N + +PE L
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKR--FSDVTGNKIAKN--VQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDYPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|239742297 PREDICTED: hypothetical protein XP_002342480 [Homo
sapiens]
Length = 530
Score = 81.6 bits (200), Expect = 4e-15
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + + +Q D E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKR F T ++I N + +PE L
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKR--FSDVTGNKIAKN--VQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTASSITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
>gi|239742287 PREDICTED: hypothetical protein XP_002342475 [Homo
sapiens]
Length = 530
Score = 81.6 bits (200), Expect = 4e-15
Identities = 111/450 (24%), Positives = 176/450 (39%), Gaps = 102/450 (22%)
Query: 101 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKK 160
GL N TCY+N+ LQ L TP N + E ++ + +Q +
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPG 140
Query: 161 RAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALE--------QKWKQTEQADLINEL 212
I+ + + +Q D E DA++ Q ++ LI+++
Sbjct: 141 HVIQPSQALAA----GFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQI 196
Query: 213 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 272
+ G + ++CL C D YLDI L I QA SV++AL ++PE L+G N
Sbjct: 197 FGGYWRSQIKCLHCHGISDTFDPYLDIALDI------QAAQSVQQALEQLVKPEELNGEN 250
Query: 273 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 332
Y C C ++ A K L +L L LKR F T ++I N + +PE L
Sbjct: 251 AYHCGVCLQRAPASKTLTLHTSAKVLILVLKR--FSDVTGNKIAKN--VQYPECL----- 301
Query: 333 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 392
D++ S Q N+G
Sbjct: 302 -DMQPYMSQQ--------------------------------------NTGP-------- 314
Query: 393 EKNSLIYELFSVMVHSG-SAAGGHYYACIKSFSDEQWYSFNDQHV------SRITQED-- 443
L+Y L++V+VH+G S GHY++ +K+ + QWY +D V S ++Q+
Sbjct: 315 ----LVYVLYAVLVHAGWSCHNGHYFSYVKA-QEGQWYKMDDAEVTAASITSVLSQQAYV 369
Query: 444 ---IKKT---HGGSSGSRGYYSSAF-ASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKN 496
I+K+ S SRG A A T+ LK R+ L+ E EH+
Sbjct: 370 LFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELK---RDHPCLQAPELDEHLVE 426
Query: 497 LVQKERELEE----QEKRQREIERNTCKIK 522
+E L+ QE+ + + E N K++
Sbjct: 427 RATQESTLDHWKFLQEQNKTKPEFNVRKVE 456
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,065,840
Number of Sequences: 37866
Number of extensions: 2204239
Number of successful extensions: 8791
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 7638
Number of HSP's gapped (non-prelim): 881
length of query: 1287
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1173
effective length of database: 13,930,794
effective search space: 16340821362
effective search space used: 16340821362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.