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Search of human proteins with 71774083
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71774083 myc proto-oncogene protein [Homo sapiens]
(454 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71774083 myc proto-oncogene protein [Homo sapiens] 912 0.0
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 251 7e-67
gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens] 153 4e-37
gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens] 153 4e-37
gi|20127386 l-myc-1 proto-oncogene isoform 2 [Homo sapiens] 69 9e-12
gi|239757875 PREDICTED: similar to L-myc-2 protein, partial [Hom... 61 2e-09
gi|21704263 MAX protein isoform b [Homo sapiens] 57 3e-08
gi|21704261 MAX protein isoform a [Homo sapiens] 57 3e-08
gi|21704269 MAX protein isoform e [Homo sapiens] 55 2e-07
gi|21704265 MAX protein isoform c [Homo sapiens] 55 2e-07
gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens] 52 8e-07
gi|13775222 MAX dimerization protein 3 isoform a [Homo sapiens] 52 8e-07
gi|57242782 MAX interactor 1 isoform a [Homo sapiens] 49 7e-06
gi|47717116 MAX interactor 1 isoform b [Homo sapiens] 49 7e-06
gi|9945318 MAX binding protein [Homo sapiens] 47 4e-05
gi|4507447 transcription factor AP-4 (activating enhancer bindin... 45 2e-04
gi|5453734 MAD4 [Homo sapiens] 45 2e-04
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 44 3e-04
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 44 3e-04
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 44 3e-04
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 44 3e-04
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 44 4e-04
gi|122937388 MAX gene associated [Homo sapiens] 44 4e-04
gi|55741677 SET domain containing 1A [Homo sapiens] 43 5e-04
gi|91208420 bassoon protein [Homo sapiens] 43 5e-04
gi|226498192 atonal homolog 8 [Homo sapiens] 43 7e-04
gi|33636756 MAP/microtubule affinity-regulating kinase 4 [Homo s... 42 0.001
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 42 0.001
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 42 0.001
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 42 0.001
>gi|71774083 myc proto-oncogene protein [Homo sapiens]
Length = 454
Score = 912 bits (2358), Expect = 0.0
Identities = 454/454 (100%), Positives = 454/454 (100%)
Query: 1 MDFFRVVENQQPPATMPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAP 60
MDFFRVVENQQPPATMPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAP
Sbjct: 1 MDFFRVVENQQPPATMPLNVSFTNRNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAP 60
Query: 61 SEDIWKKFELLPTPPLSPSRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTEL 120
SEDIWKKFELLPTPPLSPSRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTEL
Sbjct: 61 SEDIWKKFELLPTPPLSPSRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTEL 120
Query: 121 LGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPA 180
LGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPA
Sbjct: 121 LGGDMVNQSFICDPDDETFIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPA 180
Query: 181 RGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLS 240
RGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLS
Sbjct: 181 RGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLS 240
Query: 241 STESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAG 300
STESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAG
Sbjct: 241 STESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAG 300
Query: 301 GHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSP 360
GHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSP
Sbjct: 301 GHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSP 360
Query: 361 RSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILS 420
RSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILS
Sbjct: 361 RSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILS 420
Query: 421 VQAEEQKLISEEDLLRKRREQLKHKLEQLRNSCA 454
VQAEEQKLISEEDLLRKRREQLKHKLEQLRNSCA
Sbjct: 421 VQAEEQKLISEEDLLRKRREQLKHKLEQLRNSCA 454
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 251 bits (642), Expect = 7e-67
Identities = 181/474 (38%), Positives = 257/474 (54%), Gaps = 74/474 (15%)
Query: 25 RNYDLDYDSVQPYFYCDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSPSRRSGL 84
+N DL++DS+QP FY DE++ ++ + P EDIWKKFELLPTPPLSPSR
Sbjct: 15 KNPDLEFDSLQPCFYPDEDDFYFGGPDSTP-----PGEDIWKKFELLPTPPLSPSRGFAE 69
Query: 85 CS---PSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIK 141
S PS+V T L + G S A++ LGG N
Sbjct: 70 HSSEPPSWV--TEMLLENELWG-----SPAEEDAFGLGGLGGLTPNP------------- 109
Query: 142 NIIIQDCMWSGFSAAAKL---VSEKL--------ASYQAARKDSGSPNPA-RGHSVCS-- 187
+I+QDCMWSGFSA KL VSEKL A A +G+ +PA RGH +
Sbjct: 110 -VILQDCMWSGFSAREKLERAVSEKLQHGRGPPTAGSTAQSPGAGAASPAGRGHGGAAGA 168
Query: 188 --TSSLYLQDLSAAASECIDPSVVFPYPLNDSSS---PKSCASQDSSAFSPSSDSLLSST 242
+ +L+ A+EC+DP+VVFP+P+N P + AS ++ + +S + +++
Sbjct: 169 GRAGAALPAELAHPAAECVDPAVVFPFPVNKREPAPVPAAPASAPAAGPAVASGAGIAAP 228
Query: 243 ESSPQGSPEP--------------LVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKRQAP 288
+P +P E+T + + +EE+++EEEIDVV+VEKR++
Sbjct: 229 AGAPGVAPPRPGGRQTSGGDHKALSTSGEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSS 288
Query: 289 GKRSESGS--------PSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPS--TRKDYPAAK 338
+ +A G + S L+LKRC QHNYAAP +D P K
Sbjct: 289 SNTKAVTTFTITVRPKNAALGPGRAQSSELILKRCLPIHQQHNYAAPSPYVESEDAPPQK 348
Query: 339 RVKLD-SVRVLRQ-ISNNRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQI 396
++K + S R L+ I K SPR+SD+E++ +RR HN+LERQRRN+L+ SF LRD +
Sbjct: 349 KIKSEASPRPLKSVIPPKAKSLSPRNSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHV 408
Query: 397 PELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLR 450
PEL NEKA KVVILKKAT Y+ S+QAEE +L+ E++ L+ R++QL K+E R
Sbjct: 409 PELVKNEKAAKVVILKKATEYVHSLQAEEHQLLLEKEKLQARQQQLLKKIEHAR 462
>gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
Length = 364
Score = 153 bits (386), Expect = 4e-37
Identities = 145/447 (32%), Positives = 201/447 (44%), Gaps = 112/447 (25%)
Query: 29 LDYDSVQPYFY-CDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSPSRRSGLCSP 87
+DYDS Q YFY D E+FY+ APSEDIWKKFEL+P+PP SP G P
Sbjct: 1 MDYDSYQHYFYDYDCGEDFYRST--------APSEDIWKKFELVPSPPTSPPWGLG---P 49
Query: 88 SYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNIIIQD 147
P + GG T D+ E G S II +D
Sbjct: 50 GAGDPAPGIGPPEPWPGG---CTGDEAESRGHSKGWGRNYAS-------------IIRRD 93
Query: 148 CMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPS 207
CMWSGFSA +L + A D +P RG+
Sbjct: 94 CMWSGFSARERL--------ERAVSDRLAPGAPRGN------------------------ 121
Query: 208 VVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDS 267
P S++P S ++ +P++ P G P+ T + S+S
Sbjct: 122 -----PPKASAAPDCTPSLEAGNPAPAAPC--------PLGEPK-------TQACSGSES 161
Query: 268 EEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTH--QHNYA 325
+ E+EE IDVV+VEKRQ+ G R P P P +K H+S H QHNYA
Sbjct: 162 PSDSENEE-IDVVTVEKRQSLGIR----KPVTITVRADPLDP-CMKHFHISIHQQQHNYA 215
Query: 326 A--PPSTRKDYPAAKRVKLDSVRVLRQISNNRK--------------------C-TSPRS 362
A PP + A++R + V + R + ++ C P S
Sbjct: 216 ARFPPESCSQEEASERGPQEEV-LERDAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVS 274
Query: 363 SDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQ 422
SDTE+ KR+ HN LER+RRN+L+ F ALRDQ+P L + KAPKVVIL KA Y+ ++
Sbjct: 275 SDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQALV 334
Query: 423 AEEQKLISEEDLLRKRREQLKHKLEQL 449
E+++ +E+ LR R++QL+ ++ L
Sbjct: 335 GAEKRMATEKRQLRCRQQQLQKRIAYL 361
>gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
Length = 364
Score = 153 bits (386), Expect = 4e-37
Identities = 145/447 (32%), Positives = 201/447 (44%), Gaps = 112/447 (25%)
Query: 29 LDYDSVQPYFY-CDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSPSRRSGLCSP 87
+DYDS Q YFY D E+FY+ APSEDIWKKFEL+P+PP SP G P
Sbjct: 1 MDYDSYQHYFYDYDCGEDFYRST--------APSEDIWKKFELVPSPPTSPPWGLG---P 49
Query: 88 SYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNIIIQD 147
P + GG T D+ E G S II +D
Sbjct: 50 GAGDPAPGIGPPEPWPGG---CTGDEAESRGHSKGWGRNYAS-------------IIRRD 93
Query: 148 CMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPS 207
CMWSGFSA +L + A D +P RG+
Sbjct: 94 CMWSGFSARERL--------ERAVSDRLAPGAPRGN------------------------ 121
Query: 208 VVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDS 267
P S++P S ++ +P++ P G P+ T + S+S
Sbjct: 122 -----PPKASAAPDCTPSLEAGNPAPAAPC--------PLGEPK-------TQACSGSES 161
Query: 268 EEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTH--QHNYA 325
+ E+EE IDVV+VEKRQ+ G R P P P +K H+S H QHNYA
Sbjct: 162 PSDSENEE-IDVVTVEKRQSLGIR----KPVTITVRADPLDP-CMKHFHISIHQQQHNYA 215
Query: 326 A--PPSTRKDYPAAKRVKLDSVRVLRQISNNRK--------------------C-TSPRS 362
A PP + A++R + V + R + ++ C P S
Sbjct: 216 ARFPPESCSQEEASERGPQEEV-LERDAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVS 274
Query: 363 SDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQ 422
SDTE+ KR+ HN LER+RRN+L+ F ALRDQ+P L + KAPKVVIL KA Y+ ++
Sbjct: 275 SDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQALV 334
Query: 423 AEEQKLISEEDLLRKRREQLKHKLEQL 449
E+++ +E+ LR R++QL+ ++ L
Sbjct: 335 GAEKRMATEKRQLRCRQQQLQKRIAYL 361
>gi|20127386 l-myc-1 proto-oncogene isoform 2 [Homo sapiens]
Length = 206
Score = 68.9 bits (167), Expect = 9e-12
Identities = 74/230 (32%), Positives = 98/230 (42%), Gaps = 60/230 (26%)
Query: 29 LDYDSVQPYFY-CDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTPPLSP----SRRSG 83
+DYDS Q YFY D E+FY+ APSEDIWKKFEL+P+PP SP +G
Sbjct: 1 MDYDSYQHYFYDYDCGEDFYRST--------APSEDIWKKFELVPSPPTSPPWGLGPGAG 52
Query: 84 LCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDETFIKNI 143
+P P+ GG T D+ E G S I
Sbjct: 53 DPAPGIGPPEPW------PGG----CTGDEAESRGHSKGWGRNYAS-------------I 89
Query: 144 IIQDCMWSGFSAAAKL---VSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAA 200
I +DCMWSGFSA +L VS++L A G+P A C+ S
Sbjct: 90 IRRDCMWSGFSARERLERAVSDRL----APGAPRGNPPKASAAPDCTPS----------- 134
Query: 201 SECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSP 250
E +P+ P PL + + ++C+ +S SDS E S +G P
Sbjct: 135 LEAGNPAPAAPCPLGEPKT-QACSGSES-----PSDSGKDLPEPSKRGPP 178
>gi|239757875 PREDICTED: similar to L-myc-2 protein, partial [Homo
sapiens]
Length = 349
Score = 60.8 bits (146), Expect = 2e-09
Identities = 92/390 (23%), Positives = 131/390 (33%), Gaps = 118/390 (30%)
Query: 21 SFTNRNYDLDYDSVQPYFY-CDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTP-PLSP 78
S ++ ++D DS YFY D E+FY+ PSEDIWKKFEL+P P L P
Sbjct: 52 SCVSKQANMDRDSYHHYFYDYDGGEDFYRST--------TPSEDIWKKFELVPPPWDLGP 103
Query: 79 SRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDET 138
+ + S + P GD + D
Sbjct: 104 AAGNPALSFGLLEPWPVGCAGDETESQDYWKAWD-------------------------A 138
Query: 139 FIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSA 198
++I +DCMWSGFS + L
Sbjct: 139 NYASLIRRDCMWSGFSTQ-------------------------------------EPLER 161
Query: 199 AASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEE 258
A S+ + Y + ++P ++ +P LL G P+
Sbjct: 162 AVSDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLL--------GEPKIQACSRS 213
Query: 259 TPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVS 318
P SDSE E+ D V+V+KRQ+ R P + H+S
Sbjct: 214 ESP---SDSEGEEID------VTVKKRQSLSTRKPVIIAVRADLLDPR-----MNLFHIS 259
Query: 319 TH--QHNYAAP------------------PSTRKDYPAAKRVKLDSVRVLRQISNNRKCT 358
H QHNYAAP + ++ P K K D V +
Sbjct: 260 IHQQQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKDDKEDEEIVSLPPVESEAAQ 319
Query: 359 S----PRSSDTEENVKRRTHNVLERQRRNE 384
S P DTE K++ H+ LER+RRN+
Sbjct: 320 SCQPKPIHYDTENWTKKKYHSYLERKRRND 349
>gi|21704263 MAX protein isoform b [Homo sapiens]
Length = 151
Score = 57.0 bits (136), Expect = 3e-08
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 370 KRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLI 429
KR HN LER+RR+ +K SF +LRD +P L+ EKA + IL KAT YI ++ +
Sbjct: 15 KRAHHNALERKRRDHIKDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRKNHTHQ 73
Query: 430 SEEDLLRKRR---EQLKHKLEQLRNS 452
+ D L+++ EQ LE+ R+S
Sbjct: 74 QDIDDLKRQNALLEQQVRALEKARSS 99
>gi|21704261 MAX protein isoform a [Homo sapiens]
Length = 160
Score = 57.0 bits (136), Expect = 3e-08
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 370 KRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLI 429
KR HN LER+RR+ +K SF +LRD +P L+ EKA + IL KAT YI ++ +
Sbjct: 24 KRAHHNALERKRRDHIKDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRKNHTHQ 82
Query: 430 SEEDLLRKRR---EQLKHKLEQLRNS 452
+ D L+++ EQ LE+ R+S
Sbjct: 83 QDIDDLKRQNALLEQQVRALEKARSS 108
>gi|21704269 MAX protein isoform e [Homo sapiens]
Length = 134
Score = 54.7 bits (130), Expect = 2e-07
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 370 KRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLI 429
KR HN LER+RR+ +K SF +LRD +P L+ EKA + IL KAT YI ++ +
Sbjct: 24 KRAHHNALERKRRDHIKDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRKNHTHQ 82
Query: 430 SEEDLLRKRREQLKHKLE 447
+ D L+++ L+ + E
Sbjct: 83 QDIDDLKRQNALLEQQGE 100
>gi|21704265 MAX protein isoform c [Homo sapiens]
Length = 103
Score = 54.7 bits (130), Expect = 2e-07
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 370 KRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLI 429
KR HN LER+RR+ +K SF +LRD +P L+ EKA + IL KAT YI ++ +
Sbjct: 24 KRAHHNALERKRRDHIKDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRKNHTHQ 82
Query: 430 SEEDLLRKRREQLKHKLE 447
+ D L+++ L+ + E
Sbjct: 83 QDIDDLKRQNALLEQQGE 100
>gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens]
Length = 193
Score = 52.4 bits (124), Expect = 8e-07
Identities = 28/97 (28%), Positives = 56/97 (57%)
Query: 354 NRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKK 413
+R+ P + ++ R HN LE++RR +LKR L+ Q+P + + + +L++
Sbjct: 42 HRRKKRPPQAPGAQDSGRSVHNELEKRRRAQLKRCLERLKQQMPLGADCARYTTLSLLRR 101
Query: 414 ATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLR 450
A +I ++ +EQ+ ++ LR +++ L+ +LEQLR
Sbjct: 102 ARMHIQKLEDQEQRARQLKERLRSKQQSLQRQLEQLR 138
>gi|13775222 MAX dimerization protein 3 isoform a [Homo sapiens]
Length = 206
Score = 52.4 bits (124), Expect = 8e-07
Identities = 28/97 (28%), Positives = 56/97 (57%)
Query: 354 NRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKK 413
+R+ P + ++ R HN LE++RR +LKR L+ Q+P + + + +L++
Sbjct: 42 HRRKKRPPQAPGAQDSGRSVHNELEKRRRAQLKRCLERLKQQMPLGADCARYTTLSLLRR 101
Query: 414 ATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLR 450
A +I ++ +EQ+ ++ LR +++ L+ +LEQLR
Sbjct: 102 ARMHIQKLEDQEQRARQLKERLRSKQQSLQRQLEQLR 138
>gi|57242782 MAX interactor 1 isoform a [Homo sapiens]
Length = 228
Score = 49.3 bits (116), Expect = 7e-06
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 321 QHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQ 380
+H YA+ +P+ +L + R++S +K +S S+ + N R THN LE+
Sbjct: 27 EHGYAS------SFPSMPSPRLQHSKPPRRLSRAQKHSSGSSNTSTAN--RSTHNELEKN 78
Query: 381 RRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRRE 440
RR L+ L+ IP + + + +L KA A+I ++ E+K + + L + +
Sbjct: 79 RRAHLRLCLERLKVLIPLGPDCTRHTTLGLLNKAKAHIKKLEEAERKSQHQLENLEREQR 138
Query: 441 QLKHKLEQLR 450
LK +LEQL+
Sbjct: 139 FLKWRLEQLQ 148
>gi|47717116 MAX interactor 1 isoform b [Homo sapiens]
Length = 295
Score = 49.3 bits (116), Expect = 7e-06
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 321 QHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQ 380
+H YA+ +P+ +L + R++S +K +S S+ + N R THN LE+
Sbjct: 94 EHGYAS------SFPSMPSPRLQHSKPPRRLSRAQKHSSGSSNTSTAN--RSTHNELEKN 145
Query: 381 RRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRRE 440
RR L+ L+ IP + + + +L KA A+I ++ E+K + + L + +
Sbjct: 146 RRAHLRLCLERLKVLIPLGPDCTRHTTLGLLNKAKAHIKKLEEAERKSQHQLENLEREQR 205
Query: 441 QLKHKLEQLR 450
LK +LEQL+
Sbjct: 206 FLKWRLEQLQ 215
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 47.0 bits (110), Expect = 4e-05
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 371 RRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEE----- 425
R HN LE+ RR LK F L+ IP ++ ++K + +L+ A YI S++ +E
Sbjct: 222 REVHNKLEKNRRAHLKECFETLKRNIPNVD-DKKTSNLSVLRTALRYIQSLKRKEKEYEH 280
Query: 426 --QKLISEEDLLRKRREQLKHKLEQ 448
++L E+ ++R +LKH+L Q
Sbjct: 281 EMERLAREKIATQQRLAELKHELSQ 305
>gi|4507447 transcription factor AP-4 (activating enhancer binding
protein 4) [Homo sapiens]
Length = 338
Score = 44.7 bits (104), Expect = 2e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 354 NRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKK 413
N T D E ++R N ER+R + F +L+ IP + EK K IL++
Sbjct: 33 NIPLTPETQRDQERRIRREIANSNERRRMQSINAGFQSLKTLIPHTDG-EKLSKAAILQQ 91
Query: 414 ATAYILSVQAEEQKLISEEDLLRKRREQL 442
YI S++ E+ +L+ + L++ ++L
Sbjct: 92 TAEYIFSLEQEKTRLLQQNTQLKRFIQEL 120
>gi|5453734 MAD4 [Homo sapiens]
Length = 209
Score = 44.7 bits (104), Expect = 2e-04
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 321 QHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQ 380
+H YA+ D+ R K + ++R+ NNR +HN LE+
Sbjct: 24 EHGYASVLPFDGDFA---REKTKAAGLVRKAPNNRS----------------SHNELEKH 64
Query: 381 RRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRRE 440
RR +L+ L+ +P ++ + + +LK+A +I ++ ++++ +S ++ L++
Sbjct: 65 RRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKEQLQQEHR 124
Query: 441 QLKHKLEQL 449
LK +LEQL
Sbjct: 125 FLKRRLEQL 133
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 3e-04
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 200 ASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPE-PLVLHEE 258
A + ID ++ P P+++ + PK + + + +LL S S + P PL E
Sbjct: 445 APDTIDLTLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEP 504
Query: 259 TPPTTSSDSEEEQEDE---EEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRC 315
P T+ + + E+E++ + EKR+ +R E G+ ++GG S P + LVL
Sbjct: 505 RKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDN 564
Query: 316 HVS-----THQHNYAAPPSTRKDYPA 336
S T AAP T PA
Sbjct: 565 DRSLLERWTRMARPAAPALTSVPAPA 590
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 3e-04
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 200 ASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPE-PLVLHEE 258
A + ID ++ P P+++ + PK + + + +LL S S + P PL E
Sbjct: 445 APDTIDLTLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEP 504
Query: 259 TPPTTSSDSEEEQEDE---EEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRC 315
P T+ + + E+E++ + EKR+ +R E G+ ++GG S P + LVL
Sbjct: 505 RKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDN 564
Query: 316 HVS-----THQHNYAAPPSTRKDYPA 336
S T AAP T PA
Sbjct: 565 DRSLLERWTRMARPAAPALTSVPAPA 590
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 3e-04
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 200 ASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPE-PLVLHEE 258
A + ID ++ P P+++ + PK + + + +LL S S + P PL E
Sbjct: 445 APDTIDLTLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEP 504
Query: 259 TPPTTSSDSEEEQEDE---EEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRC 315
P T+ + + E+E++ + EKR+ +R E G+ ++GG S P + LVL
Sbjct: 505 RKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDN 564
Query: 316 HVS-----THQHNYAAPPSTRKDYPA 336
S T AAP T PA
Sbjct: 565 DRSLLERWTRMARPAAPALTSVPAPA 590
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 43.9 bits (102), Expect = 3e-04
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 200 ASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPE-PLVLHEE 258
A + ID ++ P P+++ + PK + + + +LL S S + P PL E
Sbjct: 306 APDTIDLTLQPPPPVSEPAPPKKDGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEP 365
Query: 259 TPPTTSSDSEEEQEDE---EEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRC 315
P T+ + + E+E++ + EKR+ +R E G+ ++GG S P + LVL
Sbjct: 366 RKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGGPSTDPLAGLVLSDN 425
Query: 316 HVS-----THQHNYAAPPSTRKDYPA 336
S T AAP T PA
Sbjct: 426 DRSLLERWTRMARPAAPALTSVPAPA 451
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 43.5 bits (101), Expect = 4e-04
Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 11/247 (4%)
Query: 213 PLNDSSSPKSCASQDSSAFS-PSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQ 271
PL SP + + + S PSS+ + +TE+ S L + E+ T + S +
Sbjct: 768 PLTLEISPDNSLRRAAEGISCPSSEGAVGTTEAYGPASKNLLSITEDPEVGTPTYSPSLK 827
Query: 272 EDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPSTR 331
E + + S E+R + G RS + S G P + K H+ H +Y +
Sbjct: 828 ELDPNQPLESKERRASDGSRSPTPSQKLGSAYLPSYHHSPYKHAHIPAHAQHYQSYMQLI 887
Query: 332 KDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRR---THNVLERQRRNELKRS 388
+ A + + S L + + +P E VK R T + +R R+ L R
Sbjct: 888 QQKSAVEYAQ--SQMSLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRE 945
Query: 389 -FFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLE 447
+R++ + ++ A + + S + +Q L+ ++ R+R ++ +L+
Sbjct: 946 RALKIREERSGMTTDDDA----VSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLD 1001
Query: 448 QLRNSCA 454
L+ A
Sbjct: 1002 CLKEQQA 1008
>gi|122937388 MAX gene associated [Homo sapiens]
Length = 3114
Score = 43.5 bits (101), Expect = 4e-04
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 371 RRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLIS 430
RRTH ER+RR E++ F L+ + L ++ K K +IL +A + I + + KLI
Sbjct: 2474 RRTHTANERRRRGEMRDLFEKLKITL-GLLHSSKVSKSLILTRAFSEIQGLTDQADKLIG 2532
Query: 431 EEDLLRKRREQLKHKLEQL 449
+++LL ++R L K+ L
Sbjct: 2533 QKNLLTRKRNILIRKVSSL 2551
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 43.1 bits (100), Expect = 5e-04
Identities = 53/229 (23%), Positives = 82/229 (35%), Gaps = 13/229 (5%)
Query: 151 SGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVF 210
S +S++ S K + + +D+ S S +T+S + +AA + S
Sbjct: 285 SAYSSSTTSTSFKPRRSENSYQDAFSRRHFSASSASTTASTAIAATTAATASSSASSSSL 344
Query: 211 PYPLNDSSSPKSCASQDSSAFSPS------------SDSLLSSTESSPQGSPEPLVLHEE 258
+ SSS S + S A P+ S +T P G+P E
Sbjct: 345 SSSSSSSSSSSSSQFRSSDANYPAYYESWNRYQRHTSYPPRRATREEPPGAPFAENTAER 404
Query: 259 TPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVS 318
PP+ +S E + D P + E G GG P + S
Sbjct: 405 FPPSYTSYLPPEPSRPTDQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEVRTSPRPAS 464
Query: 319 THQHNYAAPPSTRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEE 367
+ AP +T + P A+ LDS R+ + R S +SDTEE
Sbjct: 465 PARSGSPAPETTNESVPFAQHSSLDS-RIEMLLKEQRSKFSFLASDTEE 512
Score = 35.4 bits (80), Expect = 0.11
Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 215 NDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPE---PLVLHEETPPTTSSDSEEEQ 271
+DS S S +S SS+ S SS S SS+ESS + E P L +PP
Sbjct: 1031 SDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREVPVPTPA 1090
Query: 272 EDEEEID--VVSVEKRQAPGKRSESGSPSAGGHSKPPHSPL 310
E + V P + + P+ PP +PL
Sbjct: 1091 PVEVPVPERVAGSPVTPLPEQEASPARPAGPTEESPPSAPL 1131
Score = 31.2 bits (69), Expect = 2.0
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 215 NDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDE 274
+DSSS S + +SDS SS+ SS S + ++SS SE EDE
Sbjct: 1011 SDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSS-----SSSSSSSSSSSESSSEDE 1065
Query: 275 EE 276
EE
Sbjct: 1066 EE 1067
Score = 30.0 bits (66), Expect = 4.5
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 17/60 (28%)
Query: 215 NDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDE 274
NDS+S +S SS+ S SS S SS+ SS + S SE+E+E+E
Sbjct: 1027 NDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESS-----------------SEDEEEEE 1069
Score = 29.6 bits (65), Expect = 5.9
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 233 PSSDSLLSSTESSPQGSPEPLVLHEETP-PTTSSDSEEEQEDEEEIDVVSVEKRQAPGKR 291
P+ +L SS +PE +V E P P EE E+E E E+ + +
Sbjct: 1322 PAPAALFSSPADEVLEAPEVVVAEAEEPKPQQLQQQREEGEEEGE------EEGEEEEEE 1375
Query: 292 SESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKDYPAA--KRVKLDSVRVLR 349
S S S+ G L+R + +H PP P A R + + + +L
Sbjct: 1376 SSDSSSSSDGEG-------ALRRRSLRSHARRRRPPPPPPPPPPRAYEPRSEFEQMTILY 1428
Query: 350 QISNN 354
I N+
Sbjct: 1429 DIWNS 1433
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 43.1 bits (100), Expect = 5e-04
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 151 SGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVF 210
SG +AA + EK S A+ + G+P P+R +S ++SS L S + S P
Sbjct: 1440 SGLAAAGRAAREKPLS--ASDGEGGTPQPSRAYSYFASSSPPLSPSSPSESPTFSPG--- 1494
Query: 211 PYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLH-EETPPTTSSDSEE 269
P++ A + SP+ S + + +P +P P+V +TP S+
Sbjct: 1495 ------KMGPRATAEFSTQTPSPAPASDMPRSPGAP--TPSPMVAQGTQTPHRPSTPRLV 1546
Query: 270 EQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVL-KRCHVSTHQHNYAAPP 328
QE +E + + S++ S + H+ SPL +TH ++ PP
Sbjct: 1547 WQESSQEAPFMVIT------LASDASSQTRMVHASASTSPLCSPTETQPTTHGYSQTTPP 1600
Query: 329 S 329
S
Sbjct: 1601 S 1601
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 42.7 bits (99), Expect = 7e-04
Identities = 52/212 (24%), Positives = 78/212 (36%), Gaps = 36/212 (16%)
Query: 246 PQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSVEKR-----------------QAP 288
P P P+ + PP +D+ E+ +V KR P
Sbjct: 71 PVPVPVPVPVAPAVPPRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPPPP 130
Query: 289 GKRSES-GSPSAGGHSKPPHSPLVL-----KRCHVSTHQHNYAAPPSTRKDYPAAKRVKL 342
+S++ G P A +P P +L R S A P ST + P + +
Sbjct: 131 APQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPGES 190
Query: 343 DSVRVLRQISNNRK--CTSPRSSDTE-----------ENVKRRTHNVLERQRRNELKRSF 389
+ I NN + SPR E + +R N ER R + + +F
Sbjct: 191 SYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKALQQTRRLLANARERTRVHTISAAF 250
Query: 390 FALRDQIPELENNEKAPKVVILKKATAYILSV 421
ALR Q+P +K K+ IL+ A YILS+
Sbjct: 251 EALRKQVPCYSYGQKLSKLAILRIACNYILSL 282
>gi|33636756 MAP/microtubule affinity-regulating kinase 4 [Homo
sapiens]
Length = 688
Score = 42.0 bits (97), Expect = 0.001
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 20/119 (16%)
Query: 215 NDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDE 274
N +SS K + S SS + S P P LH + PT++ ++E ++E
Sbjct: 395 NGTSSSKG--TSHSKGQRSSSSTYHRQRRHSDFCGPSPAPLHPKRSPTSTGEAELKEE-- 450
Query: 275 EEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVSTHQHNYAAPPSTRKD 333
+ PG+++ + +G PP SP+V S H N A P RKD
Sbjct: 451 -----------RLPGRKASCSTAGSGSRGLPPSSPMV-----SSAHNPNKAEIPERRKD 493
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 41.6 bits (96), Expect = 0.001
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 28/222 (12%)
Query: 163 KLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPKS 222
++ S Q ++ S SP+P R +SL A+ E P P ++SSP
Sbjct: 373 EIKSSQGLKEKSKSPSPPRLTEDRKKASLVALPEQTASEEETPP----PLLTKEASSP-- 426
Query: 223 CASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVSV 282
P L S E P P P VL + +PP T +D+ E + + +V
Sbjct: 427 ----------PPHPQLHSEEEIEPMEGPAPPVLIQLSPPNTDADTRELLVSQHTVQLVGG 476
Query: 283 EKRQAPGKRSESGSPSAGGHSKPPHS---PLVLKRCHVSTHQHNYAAPPSTRKDYPAAKR 339
+ +++ SP+ K P PLV K P S R P
Sbjct: 477 LSPLSSPSDTKAESPA----EKVPEESVLPLVQKSTLADYSAQKDLEPESDRSAQPLP-- 530
Query: 340 VKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQR 381
+K++ + + + I+ +C S + +E +R +H +L R
Sbjct: 531 LKIEELALAKGIT--EECLKQPSLEQKEG-RRASHTLLPSHR 569
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 162 EKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPK 221
+K A+ +++ KD G + HS S SS S+ +S S + S
Sbjct: 45 DKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTS---------TGSSS 95
Query: 222 SCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVS 281
+S +S+ S SS + SS+ SS GSP P + + S S+ + DE+E
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE----- 150
Query: 282 VEKRQAPGKR 291
KR++P +
Sbjct: 151 -RKRRSPSPK 159
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 41.6 bits (96), Expect = 0.001
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 162 EKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSAAASECIDPSVVFPYPLNDSSSPK 221
+K A+ +++ KD G + HS S SS S+ +S S + S
Sbjct: 45 DKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTS---------TGSSS 95
Query: 222 SCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEEEQEDEEEIDVVS 281
+S +S+ S SS + SS+ SS GSP P + + S S+ + DE+E
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE----- 150
Query: 282 VEKRQAPGKR 291
KR++P +
Sbjct: 151 -RKRRSPSPK 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,860,909
Number of Sequences: 37866
Number of extensions: 1159992
Number of successful extensions: 10327
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 426
Number of HSP's that attempted gapping in prelim test: 8307
Number of HSP's gapped (non-prelim): 1727
length of query: 454
length of database: 18,247,518
effective HSP length: 106
effective length of query: 348
effective length of database: 14,233,722
effective search space: 4953335256
effective search space used: 4953335256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.