Guide to the Human Genome
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Name: RGS7BP Sequence: fasta or formatted (257aa) NCBI GI: 71274166
Description:

regulator of G-protein signaling 7 binding protein

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         11           2
 C cysteine            3.9         10           2
 D aspartate           4.7         12           2
 E glutamate           7.8         20           2
 F phenylalanine       1.9          5           2
 G glycine             5.4         14           3
 H histidine           2.3          6           1
 I isoleucine          4.7         12           1
 K lysine              6.6         17           2
 L leucine            10.5         27           2
 M methionine          3.5          9           1
 N asparagine          2.3          6           1
 P proline             5.4         14           2
 Q glutamine           5.4         14           2
 R arginine            8.2         21           3
 S serine             12.5         32           4
 T threonine           5.1         13           2
 V valine              3.1          8           1
 W tryptophan          0.8          2           1
 Y tyrosine            1.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regulator of G-protein signaling 7 binding protein [... 
RGS9BP                0.046   RGS9 anchor protein 
LAMB3                 0.028   laminin, beta 3 precursor 
LAMB3                 0.028   laminin, beta 3 precursor 
LAMB3                 0.028   laminin, beta 3 precursor 
FAM9A                 0.020   family with sequence similarity 9, member A 
USP47                 0.014   ubiquitin specific protease 47 
DRP2                  0.012   dystrophin related protein 2 
APC                   0.010   adenomatous polyposis coli 
APC                   0.010   adenomatous polyposis coli 
APC                   0.010   adenomatous polyposis coli 
DVL3                  0.010   dishevelled 3 
DOCK6                 0.010   dedicator of cytokinesis 6 
NCOR1                 0.008   nuclear receptor co-repressor 1 
AKNA                  0.008   AT-hook transcription factor 
TCF7L2                0.006   transcription factor 7-like 2 isoform 1 
TCF7L2                0.006   transcription factor 7-like 2 isoform 2 
TCF7L2                0.006   transcription factor 7-like 2 isoform 6 
TCF7L2                0.006   transcription factor 7-like 2 isoform 5 
TCF7L2                0.006   transcription factor 7-like 2 isoform 4 
TCF7L2                0.006   transcription factor 7-like 2 isoform 3 
C18orf25              0.006   ARKadia-like 1 isoform b 
C18orf25              0.006   ARKadia-like 1 isoform a 
ZNF200                0.006   zinc finger protein 200 isoform 3 
ZNF200                0.006   zinc finger protein 200 isoform 3 
ZNF200                0.006   zinc finger protein 200 isoform 3 
PRKAR1A               0.006   cAMP-dependent protein kinase, regulatory subunit al...
PRKAR1A               0.006   cAMP-dependent protein kinase, regulatory subunit al...
PRKAR1A               0.006   cAMP-dependent protein kinase, regulatory subunit alp...
AKAP12                0.006   A kinase (PRKA) anchor protein 12 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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