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Search of human proteins with 6912394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912394 guanine nucleotide binding protein (G protein),
gamma 3 [Homo sapiens]
(75 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912394 guanine nucleotide binding protein (G protein), gamma... 154 1e-38
gi|54114974 guanine nucleotide binding protein (G protein), gamm... 114 2e-26
gi|148922937 guanine nucleotide binding protein (G protein), gam... 105 6e-24
gi|148922892 guanine nucleotide binding protein (G protein), gam... 105 6e-24
gi|4758450 guanine nucleotide binding protein (G protein), gamma... 105 6e-24
gi|15147246 guanine nucleotide binding protein (G protein), gamm... 91 2e-19
gi|32698769 guanine nucleotide binding protein (G protein), gamm... 86 6e-18
gi|51036603 G-protein gamma-12 subunit [Homo sapiens] 85 1e-17
gi|63055067 guanine nucleotide binding protein (G protein), gamm... 68 2e-12
gi|4885287 guanine nucleotide binding protein (G protein), gamma... 64 3e-11
gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo ... 57 3e-09
gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo ... 57 3e-09
gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens] 53 6e-08
gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens] 53 6e-08
gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens] 53 6e-08
gi|21361097 DNAJC25-GNG10 protein [Homo sapiens] 50 5e-07
gi|14589849 guanine nucleotide binding protein-gamma transducing... 48 2e-06
gi|11386179 guanine nucleotide binding protein (G protein), gamm... 47 3e-06
gi|4758448 guanine nucleotide binding protein gamma 11 precursor... 47 3e-06
gi|7706567 guanine nucleotide binding protein (G protein), gamma... 33 0.065
gi|156627563 regulator of G-protein signaling 7 [Homo sapiens] 32 0.14
gi|31742476 regulator of G-protein signalling 6 [Homo sapiens] 32 0.14
gi|31541964 argininosuccinate lyase isoform 1 [Homo sapiens] 28 2.1
gi|68303549 argininosuccinate lyase isoform 3 [Homo sapiens] 28 2.1
gi|68303547 argininosuccinate lyase isoform 2 [Homo sapiens] 28 2.1
gi|68303542 argininosuccinate lyase isoform 1 [Homo sapiens] 28 2.1
>gi|6912394 guanine nucleotide binding protein (G protein), gamma
3 [Homo sapiens]
Length = 75
Score = 154 bits (389), Expect = 1e-38
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT
Sbjct: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
Query: 61 SENPFREKKFFCALL 75
SENPFREKKFFCALL
Sbjct: 61 SENPFREKKFFCALL 75
>gi|54114974 guanine nucleotide binding protein (G protein), gamma
2 [Homo sapiens]
Length = 71
Score = 114 bits (284), Expect = 2e-26
Identities = 54/68 (79%), Positives = 62/68 (91%)
Query: 8 NSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFRE 67
N+T SI QARK+VEQLK+EA++ RIKVSKAAADLM YC+AHA EDPL+TPVP SENPFRE
Sbjct: 4 NNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFRE 63
Query: 68 KKFFCALL 75
KKFFCA+L
Sbjct: 64 KKFFCAIL 71
>gi|148922937 guanine nucleotide binding protein (G protein),
gamma 4 [Homo sapiens]
Length = 75
Score = 105 bits (263), Expect = 6e-24
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
MK NST SI QARK VEQLK+EA + R+KVS+AAADL+ YC+AH EDPLI PVP
Sbjct: 1 MKEGMSNNSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPA 60
Query: 61 SENPFREKKFFCALL 75
SENPFREKKFFC +L
Sbjct: 61 SENPFREKKFFCTIL 75
>gi|148922892 guanine nucleotide binding protein (G protein),
gamma 4 [Homo sapiens]
Length = 75
Score = 105 bits (263), Expect = 6e-24
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
MK NST SI QARK VEQLK+EA + R+KVS+AAADL+ YC+AH EDPLI PVP
Sbjct: 1 MKEGMSNNSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPA 60
Query: 61 SENPFREKKFFCALL 75
SENPFREKKFFC +L
Sbjct: 61 SENPFREKKFFCTIL 75
>gi|4758450 guanine nucleotide binding protein (G protein), gamma
4 [Homo sapiens]
Length = 75
Score = 105 bits (263), Expect = 6e-24
Identities = 52/75 (69%), Positives = 59/75 (78%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
MK NST SI QARK VEQLK+EA + R+KVS+AAADL+ YC+AH EDPLI PVP
Sbjct: 1 MKEGMSNNSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPA 60
Query: 61 SENPFREKKFFCALL 75
SENPFREKKFFC +L
Sbjct: 61 SENPFREKKFFCTIL 75
>gi|15147246 guanine nucleotide binding protein (G protein), gamma
8 [Homo sapiens]
Length = 70
Score = 90.9 bits (224), Expect = 2e-19
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 8 NSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFRE 67
N+ I +ARK VEQLK+E ++ R+KVS+AAA+L+ +C+ HA +DPL+TPVP +ENPFR+
Sbjct: 3 NNMAKIAEARKTVEQLKLEVNIDRMKVSQAAAELLAFCETHAKDDPLVTPVPAAENPFRD 62
Query: 68 KKFFCALL 75
K+ FC LL
Sbjct: 63 KRLFCVLL 70
>gi|32698769 guanine nucleotide binding protein (G protein), gamma
7 [Homo sapiens]
Length = 68
Score = 85.9 bits (211), Expect = 6e-18
Identities = 40/63 (63%), Positives = 53/63 (84%)
Query: 7 VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66
+++T +I QARK+VEQL+IEA + RIKVSKAA+DLM+YC+ HA DPL+ VP SENPF+
Sbjct: 1 MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPFK 60
Query: 67 EKK 69
+KK
Sbjct: 61 DKK 63
>gi|51036603 G-protein gamma-12 subunit [Homo sapiens]
Length = 72
Score = 84.7 bits (208), Expect = 1e-17
Identities = 39/61 (63%), Positives = 52/61 (85%)
Query: 9 STMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREK 68
ST +I QAR+ V+QL++EAS+ RIKVSKA+ADLM+YC+ HA DPL+ +PTSENPF++K
Sbjct: 7 STNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKDK 66
Query: 69 K 69
K
Sbjct: 67 K 67
>gi|63055067 guanine nucleotide binding protein (G protein), gamma
10 [Homo sapiens]
Length = 68
Score = 67.8 bits (164), Expect = 2e-12
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 7 VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66
++S S +++VEQLK+EA + RIKVS+AAA+L YC +AC+D L+ VP NPFR
Sbjct: 1 MSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFR 60
Query: 67 EKKFFCALL 75
E + CALL
Sbjct: 61 EPR-SCALL 68
>gi|4885287 guanine nucleotide binding protein (G protein), gamma
5 [Homo sapiens]
Length = 68
Score = 63.9 bits (154), Expect = 3e-11
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 7 VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66
++ + S+ +K+V+QL++EA L R+KVS+AAADL +C +A DPL+T V +S NPFR
Sbjct: 1 MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
Query: 67 EKKFFCALL 75
+K C+ L
Sbjct: 61 PQK-VCSFL 68
>gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo
sapiens]
Length = 68
Score = 57.0 bits (136), Expect = 3e-09
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 7 VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66
++S S + +VEQLK+EA + RI VS+AAA+L YC +AC+D L+ V NPF
Sbjct: 1 MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
Query: 67 EKKFFCALL 75
E + CALL
Sbjct: 61 EPR-SCALL 68
>gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo
sapiens]
Length = 68
Score = 57.0 bits (136), Expect = 3e-09
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 7 VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66
++S S + +VEQLK+EA + RI VS+AAA+L YC +AC+D L+ V NPF
Sbjct: 1 MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60
Query: 67 EKKFFCALL 75
E + CALL
Sbjct: 61 EPR-SCALL 68
>gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]
Length = 69
Score = 52.8 bits (125), Expect = 6e-08
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
M + +NS IGQA VEQL++EA + ++K+ AADL+ +C A DP + +P
Sbjct: 1 MSSKVAINS--DIGQALWAVEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPA 55
Query: 61 SENPFREKKFFCAL 74
+ N F+EKK + L
Sbjct: 56 ATNSFKEKKPYAIL 69
>gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]
Length = 69
Score = 52.8 bits (125), Expect = 6e-08
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
M + +NS IGQA VEQL++EA + ++K+ AADL+ +C A DP + +P
Sbjct: 1 MSSKVAINS--DIGQALWAVEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPA 55
Query: 61 SENPFREKKFFCAL 74
+ N F+EKK + L
Sbjct: 56 ATNSFKEKKPYAIL 69
>gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]
Length = 69
Score = 52.8 bits (125), Expect = 6e-08
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 1 MKGETPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPT 60
M + +NS IGQA VEQL++EA + ++K+ AADL+ +C A DP + +P
Sbjct: 1 MSSKVAINS--DIGQALWAVEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPA 55
Query: 61 SENPFREKKFFCAL 74
+ N F+EKK + L
Sbjct: 56 ATNSFKEKKPYAIL 69
>gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]
Length = 153
Score = 49.7 bits (117), Expect = 5e-07
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 32 IKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREKKFFCALL 75
+KVS+AAA+L YC +AC+D L+ VP NPFRE + CALL
Sbjct: 111 LKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFREPR-SCALL 153
>gi|14589849 guanine nucleotide binding protein-gamma transducing
activity polypeptide 2 [Homo sapiens]
Length = 69
Score = 47.8 bits (112), Expect = 2e-06
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 20 VEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREK 68
VEQLK E RI +SKA ++ Y +A A DP + +P +NPF+EK
Sbjct: 15 VEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPFKEK 63
>gi|11386179 guanine nucleotide binding protein (G protein), gamma
transducing activity polypeptide 1 [Homo sapiens]
Length = 74
Score = 47.4 bits (111), Expect = 3e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 20 VEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREKKFFCAL 74
V+QLK E +L R+ VSK ++ Y + + EDPL+ +P +NPF+E K C +
Sbjct: 19 VDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKELKGGCVI 73
>gi|4758448 guanine nucleotide binding protein gamma 11 precursor
[Homo sapiens]
Length = 73
Score = 47.0 bits (110), Expect = 3e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 20 VEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREK 68
VEQL+ E L R +VSK + ++ Y + + EDPL+ +P +NPF+EK
Sbjct: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
>gi|7706567 guanine nucleotide binding protein (G protein), gamma
13 [Homo sapiens]
Length = 67
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 13 IGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREK 68
+ Q +K VE LK + + R SK +L+ + + +DP + P NP+ EK
Sbjct: 6 VPQMKKEVESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEK 61
>gi|156627563 regulator of G-protein signaling 7 [Homo sapiens]
Length = 487
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 5 TPVNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENP 64
TP + + ++ ++ +I+ R+K+SK A L++Y + + DP + P P NP
Sbjct: 247 TPETKPPTEDELQQQIKYWQIQLDRHRLKMSKVADSLLSYTEQYLEYDPFLLP-PDPSNP 305
Query: 65 F 65
+
Sbjct: 306 W 306
>gi|31742476 regulator of G-protein signalling 6 [Homo sapiens]
Length = 472
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 17 RKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPF 65
RK + L + +K+SK A L+ Y + + DPLITP S NP+
Sbjct: 262 RKQITFLNAQIDRHCLKMSKVAESLIAYTEQYVEYDPLITPAEPS-NPW 309
>gi|31541964 argininosuccinate lyase isoform 1 [Homo sapiens]
Length = 464
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 9 STMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYC 45
++M R V + ASLC +S+ A DL+ YC
Sbjct: 228 NSMDATSERDFVAEFLFWASLCMTHLSRMAEDLILYC 264
>gi|68303549 argininosuccinate lyase isoform 3 [Homo sapiens]
Length = 438
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 9 STMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYC 45
++M R V + ASLC +S+ A DL+ YC
Sbjct: 202 NSMDATSERDFVAEFLFWASLCMTHLSRMAEDLILYC 238
>gi|68303547 argininosuccinate lyase isoform 2 [Homo sapiens]
Length = 444
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 9 STMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYC 45
++M R V + ASLC +S+ A DL+ YC
Sbjct: 228 NSMDATSERDFVAEFLFWASLCMTHLSRMAEDLILYC 264
>gi|68303542 argininosuccinate lyase isoform 1 [Homo sapiens]
Length = 464
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 9 STMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYC 45
++M R V + ASLC +S+ A DL+ YC
Sbjct: 228 NSMDATSERDFVAEFLFWASLCMTHLSRMAEDLILYC 264
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,720,280
Number of Sequences: 37866
Number of extensions: 82435
Number of successful extensions: 207
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 178
Number of HSP's gapped (non-prelim): 26
length of query: 75
length of database: 18,247,518
effective HSP length: 47
effective length of query: 28
effective length of database: 16,467,816
effective search space: 461098848
effective search space used: 461098848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.