Guide to the Human Genome
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Name: ZNF688 Sequence: fasta or formatted (262aa) NCBI GI: 67010013
Description:

zinc finger protein 688 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [276aa] zinc finger protein 688 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         24           2
 C cysteine            3.1          8           1
 D aspartate           3.4          9           1
 E glutamate           7.3         19           3
 F phenylalanine       3.1          8           1
 G glycine             8.4         22           2
 H histidine           2.3          6           1
 I isoleucine          3.4          9           2
 K lysine              3.8         10           1
 L leucine             4.2         11           2
 M methionine          1.9          5           1
 N asparagine          1.1          3           1
 P proline            15.3         40           2
 Q glutamine           3.4          9           1
 R arginine           13.0         34           2
 S serine              7.3         19           2
 T threonine           2.3          6           2
 V valine              5.3         14           1
 W tryptophan          1.5          4           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 688 isoform b 
ZNF688                0.808   zinc finger protein 688 isoform a 
ZNF785                0.207   zinc finger protein 785 
ZNF764                0.181   zinc finger protein 764 
ZNF689                0.158   zinc finger protein HIT-39 
REPIN1                0.102   replication initiator 1 isoform 1 
REPIN1                0.102   replication initiator 1 isoform 1 
REPIN1                0.102   replication initiator 1 isoform 3 
REPIN1                0.102   replication initiator 1 isoform 1 
ZNF449                0.102   zinc finger protein 449 
ZNF575                0.098   zinc finger protein 575 
ZNF19                 0.094   zinc finger protein 19 
ZFP92                 0.090   zinc finger protein 92 homolog 
ZNF205                0.090   zinc finger protein 205 
ZNF205                0.090   zinc finger protein 205 
ZNF169                0.089   zinc finger protein 169 
ZNF648                0.089   zinc finger protein 648 
ZNF787                0.087   zinc finger protein 787 
ZNF853                0.087   zinc finger protein 853 
ZNF697                0.085   zinc finger protein 697 
ZNF584                0.083   zinc finger protein 584 
ZNF585B               0.083   zinc finger protein 585B 
ZNF585A               0.083   zinc finger protein 585A 
ZNF585A               0.083   zinc finger protein 585A 
ZNF323                0.083   zinc finger protein 323 
ZNF323                0.083   zinc finger protein 323 
ZNF323                0.083   zinc finger protein 323 
ZNF323                0.083   zinc finger protein 323 
ZNF574                0.083   zinc finger protein 574 
PRDM9                 0.081   PR domain containing 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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