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Search of human proteins with 66346654
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66346654 proline rich 5 (renal) isoform 2 [Homo sapiens]
(379 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66346654 proline rich 5 (renal) isoform 2 [Homo sapiens] 756 0.0
gi|31317218 proline rich 5 (renal) isoform 1 [Homo sapiens] 756 0.0
gi|31317214 proline rich 5 (renal) isoform 2 [Homo sapiens] 756 0.0
gi|66346658 proline rich 5 (renal) isoform 3 [Homo sapiens] 587 e-168
gi|66346656 proline rich 5 (renal) isoform 3 [Homo sapiens] 587 e-168
gi|237757349 protor-2 isoform a [Homo sapiens] 224 1e-58
gi|237757351 protor-2 isoform a [Homo sapiens] 224 1e-58
gi|226423858 PRR5-ARHGAP8 fusion protein [Homo sapiens] 196 2e-50
gi|237757356 protor-2 isoform c [Homo sapiens] 173 2e-43
gi|237757353 protor-2 isoform b [Homo sapiens] 115 6e-26
gi|110227615 echinoderm microtubule associated protein like 3 [H... 39 0.006
gi|110815800 WD repeat domain 32 [Homo sapiens] 36 0.065
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... 36 0.065
gi|13430848 nuclear receptor subfamily 1, group D, member 1 [Hom... 36 0.065
gi|46243671 G protein-coupled receptor 152 [Homo sapiens] 36 0.065
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 35 0.085
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 35 0.085
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 35 0.085
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 35 0.15
gi|221139926 NHS-like 1 [Homo sapiens] 34 0.19
gi|20070193 nuclear receptor subfamily 5, group A, member 1 [Hom... 34 0.19
gi|157785645 SPEG complex locus [Homo sapiens] 34 0.19
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 34 0.25
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 33 0.32
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 33 0.32
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 33 0.32
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 33 0.32
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 33 0.32
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 33 0.32
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 33 0.32
>gi|66346654 proline rich 5 (renal) isoform 2 [Homo sapiens]
Length = 379
Score = 756 bits (1953), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE
Sbjct: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM
Sbjct: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
Query: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE
Sbjct: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
Query: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV
Sbjct: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
Query: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS 300
VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS
Sbjct: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS 300
Query: 301 SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR 360
SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR
Sbjct: 301 SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR 360
Query: 361 GRGSGMSDLEGSGGRQSVV 379
GRGSGMSDLEGSGGRQSVV
Sbjct: 361 GRGSGMSDLEGSGGRQSVV 379
>gi|31317218 proline rich 5 (renal) isoform 1 [Homo sapiens]
Length = 388
Score = 756 bits (1953), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE
Sbjct: 10 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 69
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM
Sbjct: 70 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 129
Query: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE
Sbjct: 130 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 189
Query: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV
Sbjct: 190 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 249
Query: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS 300
VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS
Sbjct: 250 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS 309
Query: 301 SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR 360
SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR
Sbjct: 310 SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR 369
Query: 361 GRGSGMSDLEGSGGRQSVV 379
GRGSGMSDLEGSGGRQSVV
Sbjct: 370 GRGSGMSDLEGSGGRQSVV 388
>gi|31317214 proline rich 5 (renal) isoform 2 [Homo sapiens]
Length = 379
Score = 756 bits (1953), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE
Sbjct: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM
Sbjct: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
Query: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE
Sbjct: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
Query: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV
Sbjct: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
Query: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS 300
VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS
Sbjct: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRS 300
Query: 301 SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR 360
SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR
Sbjct: 301 SPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLVDQILESVDSDSEGIFIDFGR 360
Query: 361 GRGSGMSDLEGSGGRQSVV 379
GRGSGMSDLEGSGGRQSVV
Sbjct: 361 GRGSGMSDLEGSGGRQSVV 379
>gi|66346658 proline rich 5 (renal) isoform 3 [Homo sapiens]
Length = 293
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 87 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 146
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
Query: 147 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 206
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
Query: 207 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 266
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
Query: 267 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 326
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
Query: 327 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 379
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
>gi|66346656 proline rich 5 (renal) isoform 3 [Homo sapiens]
Length = 293
Score = 587 bits (1514), Expect = e-168
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 87 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 146
MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA
Sbjct: 1 MVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQAIFYPVQGKEPSVRQLALLHFRNA 60
Query: 147 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 206
ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY
Sbjct: 61 ITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRGVTEDYLRLETLVQKVVSPYLGTY 120
Query: 207 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 266
GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG
Sbjct: 121 GLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEAEGAAAGG 180
Query: 267 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 326
TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP
Sbjct: 181 TSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDP 240
Query: 327 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 379
TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV
Sbjct: 241 TRSSLPRSSPENLVDQILESVDSDSEGIFIDFGRGRGSGMSDLEGSGGRQSVV 293
>gi|237757349 protor-2 isoform a [Homo sapiens]
Length = 368
Score = 224 bits (570), Expect = 1e-58
Identities = 125/279 (44%), Positives = 175/279 (62%), Gaps = 8/279 (2%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSP LSDL + + A Q + +++ WNS+ VI VF+ GL EL++LNE
Sbjct: 27 MSSPVLSDLPRFQAAR-------QALQLSSSSAWNSVQTAVINVFKGGGLQSNELYALNE 79
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
+R+LLK+ELGSF T+Y QNQLL KG+ + +KI+ EG+ ++ LAE WD FF++ LP
Sbjct: 80 NIRRLLKSELGSFITDYFQNQLLAKGLFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPT 139
Query: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
LQAIFYPVQG+E ++RQ++LL FR+ + L VKL D L A +++P +IVQMLL+LQ VHE
Sbjct: 140 LQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDLLLLAQSKLPSSIVQMLLILQSVHE 199
Query: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
G +E YL+LE LV++VVSP+LG G S GP T++ +R + A
Sbjct: 200 PTGPSESYLQLEELVKQVVSPFLGISGDRSFSGP-TYTLARRHSRVRPKVTVLNYASPIT 258
Query: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTS 279
S+ N +L P+ E E E S+RRH+V+ S
Sbjct: 259 AVSRPLNEMVLTPLTEQEGEAYLEKCGSVRRHTVANAHS 297
>gi|237757351 protor-2 isoform a [Homo sapiens]
Length = 368
Score = 224 bits (570), Expect = 1e-58
Identities = 125/279 (44%), Positives = 175/279 (62%), Gaps = 8/279 (2%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSP LSDL + + A Q + +++ WNS+ VI VF+ GL EL++LNE
Sbjct: 27 MSSPVLSDLPRFQAAR-------QALQLSSSSAWNSVQTAVINVFKGGGLQSNELYALNE 79
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
+R+LLK+ELGSF T+Y QNQLL KG+ + +KI+ EG+ ++ LAE WD FF++ LP
Sbjct: 80 NIRRLLKSELGSFITDYFQNQLLAKGLFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPT 139
Query: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHE 180
LQAIFYPVQG+E ++RQ++LL FR+ + L VKL D L A +++P +IVQMLL+LQ VHE
Sbjct: 140 LQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDLLLLAQSKLPSSIVQMLLILQSVHE 199
Query: 181 SRGVTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPV 240
G +E YL+LE LV++VVSP+LG G S GP T++ +R + A
Sbjct: 200 PTGPSESYLQLEELVKQVVSPFLGISGDRSFSGP-TYTLARRHSRVRPKVTVLNYASPIT 258
Query: 241 VRSKSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTS 279
S+ N +L P+ E E E S+RRH+V+ S
Sbjct: 259 AVSRPLNEMVLTPLTEQEGEAYLEKCGSVRRHTVANAHS 297
>gi|226423858 PRR5-ARHGAP8 fusion protein [Homo sapiens]
Length = 555
Score = 196 bits (499), Expect = 2e-50
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE
Sbjct: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYE 98
GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYE
Sbjct: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYE 98
>gi|237757356 protor-2 isoform c [Homo sapiens]
Length = 205
Score = 173 bits (439), Expect = 2e-43
Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 7/176 (3%)
Query: 1 MSSPSLSDLGKREPAAAADERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFSLNE 60
MSSP LSDL + + A Q + +++ WNS+ VI VF+ GL EL++LNE
Sbjct: 27 MSSPVLSDLPRFQAAR-------QALQLSSSSAWNSVQTAVINVFKGGGLQSNELYALNE 79
Query: 61 GVRQLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPM 120
+R+LLK+ELGSF T+Y QNQLL KG+ + +KI+ EG+ ++ LAE WD FF++ LP
Sbjct: 80 NIRRLLKSELGSFITDYFQNQLLAKGLFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPT 139
Query: 121 LQAIFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQ 176
LQAIFYPVQG+E ++RQ++LL FR+ + L VKL D L A +++P +IVQMLL+LQ
Sbjct: 140 LQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDLLLLAQSKLPSSIVQMLLILQ 195
>gi|237757353 protor-2 isoform b [Homo sapiens]
Length = 240
Score = 115 bits (288), Expect = 6e-26
Identities = 76/216 (35%), Positives = 103/216 (47%), Gaps = 48/216 (22%)
Query: 64 QLLKTELGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPMLQA 123
+LLK+ELGSF T+Y QNQLL KG+ + +KI+ EG+ ++ LAE WD FF++ LP LQA
Sbjct: 2 RLLKSELGSFITDYFQNQLLAKGLFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQA 61
Query: 124 IFYPVQGKEPSVRQLALLHFRNAITLSVKLEDALARAHARVPPAIVQMLLVLQGVHESRG 183
IFYPVQ VHE G
Sbjct: 62 IFYPVQ-----------------------------------------------SVHEPTG 74
Query: 184 VTEDYLRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRS 243
+E YL+LE LV++VVSP+LG G S GP T++ +R + A S
Sbjct: 75 PSESYLQLEELVKQVVSPFLGISGDRSFSGP-TYTLARRHSRVRPKVTVLNYASPITAVS 133
Query: 244 KSYNTPLLNPVQEHEAEGAAAGGTSIRRHSVSEMTS 279
+ N +L P+ E E E S+RRH+V+ S
Sbjct: 134 RPLNEMVLTPLTEQEGEAYLEKCGSVRRHTVANAHS 169
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 39.3 bits (90), Expect = 0.006
Identities = 36/103 (34%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 281 PEPQGFSDPPG--QGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPEN 338
P PQG S+ P Q G SS A GP P L P QPP++ P R+S SSP
Sbjct: 107 PAPQGASEEPSGTQSEGGGSSSSGAGSPGP-PGILRP-LQPPQRADTPRRNSSSSSSPSE 164
Query: 339 LVDQILESVDSDSEGIFIDFG----RGRGSGMSDLEGSGGRQS 377
Q L S + + G RG +S G G R+S
Sbjct: 165 RPRQKLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPGSRRS 207
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 35.8 bits (81), Expect = 0.065
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 283 PQGFSDPPGQGPTGTFRSSPAPHSGPC-----PSRLYP---TTQPPEQGLDPTRSSLPRS 334
P G P G G G P PH G PS L+P T PP P R P
Sbjct: 3 PFGPHSPGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAPSL 62
Query: 335 SP 336
SP
Sbjct: 63 SP 64
>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
[Homo sapiens]
Length = 1045
Score = 35.8 bits (81), Expect = 0.065
Identities = 49/170 (28%), Positives = 62/170 (36%), Gaps = 24/170 (14%)
Query: 189 LRLETLVQKVVSPYLGTYGLHSSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNT 248
L E L Q S L T+G +E P SC RR + V A P S
Sbjct: 381 LNSEVLEQSQQSTSL-TFG-EGAESPGGQSC-------RRGKEPKVSAGEP--GSHPSPA 429
Query: 249 PLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGP 308
P +P +A+GAA+ T V + T +PQ P Q TG+ S PH
Sbjct: 430 PRRSPAGNKQADGAASAPTEEEEEVVKDRTQQSKPQ-----PPQPSTGSLTGS--PHLSE 482
Query: 309 CPSRLYPTTQPPEQGLDP-----TRSSLPRSSPENLVDQILESVDSDSEG 353
P L P T+ + P SP L DQ D + EG
Sbjct: 483 LSVNSQGGVAPANVTLSPNLSPDTKQASPLISP-LLNDQACPRTDDEDEG 531
>gi|13430848 nuclear receptor subfamily 1, group D, member 1 [Homo
sapiens]
Length = 614
Score = 35.8 bits (81), Expect = 0.065
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 278 TSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPE 337
+ CP + P GP G P+P P PS L +Q P+Q L P RS P + E
Sbjct: 233 SQCPLETSPTQHPTPGPMG-----PSPPPAPVPSPLVGFSQFPQQ-LTPPRSPSPEPTVE 286
Query: 338 NLVDQI 343
+++ Q+
Sbjct: 287 DVISQV 292
>gi|46243671 G protein-coupled receptor 152 [Homo sapiens]
Length = 470
Score = 35.8 bits (81), Expect = 0.065
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 238 NPVVRSKSYNT--PLLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQG-- 293
NP ++ +S T P LNP + +++ A ++ S+ + P+ P
Sbjct: 361 NPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSDSVAQPQADTNVQTPAPAAS 420
Query: 294 --PTGTFRSSPAPHSGPCPSRLY-PTTQPPEQGLDPTRSSLPRSSP 336
P+ +SP P S P P L P T P +G P+ S+ P ++P
Sbjct: 421 SVPSPCDEASPTPSSHPTPGALEDPATPPASEGESPS-STPPEAAP 465
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 35.4 bits (80), Expect = 0.085
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 261 GAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPP 320
G+ G+ + R + P P G PP P+G P P SGP P QPP
Sbjct: 452 GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG---QPPPPPSGPLPPWQQQQQQPP 508
Query: 321 EQGLDPTRSSLPRSSP 336
P SS+ S+P
Sbjct: 509 PP--PPPSSSMASSTP 522
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 35.4 bits (80), Expect = 0.085
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 261 GAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPP 320
G+ G+ + R + P P G PP P+G P P SGP P QPP
Sbjct: 452 GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG---QPPPPPSGPLPPWQQQQQQPP 508
Query: 321 EQGLDPTRSSLPRSSP 336
P SS+ S+P
Sbjct: 509 PP--PPPSSSMASSTP 522
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 35.4 bits (80), Expect = 0.085
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 261 GAAAGGTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPP 320
G+ G+ + R + P P G PP P+G P P SGP P QPP
Sbjct: 452 GSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSG---QPPPPPSGPLPPWQQQQQQPP 508
Query: 321 EQGLDPTRSSLPRSSP 336
P SS+ S+P
Sbjct: 509 PP--PPPSSSMASSTP 522
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 34.7 bits (78), Expect = 0.15
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 283 PQGFSDPPGQ--GPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P+G PPG GP TF S+P SG S L P P P R P +P L
Sbjct: 1021 PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT 1080
Query: 341 DQI 343
+
Sbjct: 1081 QDL 1083
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 34.3 bits (77), Expect = 0.19
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 280 CPEPQGFSDPPGQGPTGTFRSSPAPHSG----PCPSRLYPTTQPPEQGLDPTRSSLPRSS 335
CP + PP T + SP PHS P P L P PP+ L P R +L
Sbjct: 942 CPADRSPFLPPPPPVTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALSPIL 1001
Query: 336 PENLV 340
P++ V
Sbjct: 1002 PDSPV 1006
>gi|20070193 nuclear receptor subfamily 5, group A, member 1 [Homo
sapiens]
Length = 461
Score = 34.3 bits (77), Expect = 0.19
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHS-----GPCPSRLYPT-------TQPPEQGLDPTR 328
PEP+G + P GP G F + P + GP LYP ++ PE P +
Sbjct: 147 PEPKGLAAGPPAGPLGDFGAPALPMAVPGAHGPLAGYLYPAFPGRAIKSEYPEPYASPPQ 206
Query: 329 SSLPRSSPE 337
LP PE
Sbjct: 207 PGLPYGYPE 215
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 34.3 bits (77), Expect = 0.19
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Query: 210 SSEGPFTHSCILEKRLLRRSRSGDVLAKNPVVRSKSYNTPLLNPVQEHEA----EGAAAG 265
SSE H LE R L++S S P R + PL PV A E +
Sbjct: 2109 SSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARLGARRLQESPSLS 2168
Query: 266 GTSIRRHSVSEMTSCPEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLD 325
S + S S P+P S P P+ T S P P++ + PE +
Sbjct: 2169 ALSEAQPSSPARPSAPKP---STPKSAEPSATTPSDAPQPPAPQPAQ----DKAPEPRPE 2221
Query: 326 PTRSSLPRSSPENL 339
P R+S P P+ L
Sbjct: 2222 PVRASKPAPPPQAL 2235
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.25
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 250 LLNPVQEHEAEGAAAGGTSIRRHSVSEMTSCPEPQGFSD----PPGQGPT-GTFRSSPAP 304
+L+P+ E + A T I+ + E S P+ G PP PT T SSP P
Sbjct: 370 VLSPLNLEEVQKKVAEQTFIKDDYL-ETISSPKDFGLGQRATPPPPPPPTYRTVVSSPGP 428
Query: 305 HSGPCPSRLYPTTQP--PEQGLDPTRSSLPRSSP 336
SGP P + P P L P RS+ P P
Sbjct: 429 GSGPGPGTTSGASSPARPATPLVPCRSTTPPPPP 462
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.5 bits (75), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 281 PEPQGFSDPPGQGPTGTFRSSPAPHSGPCPSRLYPTTQPPEQGLDPTRSSLPRSSPENLV 340
P P G S PG P SP P G S + P+ PP G P + P P++ +
Sbjct: 12 PRP-GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAG-HPIPTQGPGGYPQDNM 69
Query: 341 DQILESVDSDSEGIFID---FGRGRGSGM 366
Q+ + ++S E D + + +G GM
Sbjct: 70 HQMHKPMESMHEKGMSDDPRYNQMKGMGM 98
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,094,560
Number of Sequences: 37866
Number of extensions: 871145
Number of successful extensions: 4512
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 4209
Number of HSP's gapped (non-prelim): 487
length of query: 379
length of database: 18,247,518
effective HSP length: 104
effective length of query: 275
effective length of database: 14,309,454
effective search space: 3935099850
effective search space used: 3935099850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.