Guide to the Human Genome
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Name: MAGEA6 Sequence: fasta or formatted (314aa) NCBI GI: 4885469
Description:

melanoma antigen family A, 6

Referenced in:

Melanoma Antigen Family

Other entries for this name:
alt mRNA [314aa] melanoma antigen family A, 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         23           2
 C cysteine            1.3          4           1
 D aspartate           3.5         11           1
 E glutamate          11.8         37           3
 F phenylalanine       4.1         13           2
 G glycine             7.3         23           2
 H histidine           1.9          6           2
 I isoleucine          4.8         15           3
 K lysine              4.1         13           2
 L leucine            11.1         35           3
 M methionine          1.9          6           1
 N asparagine          1.6          5           1
 P proline             7.3         23           2
 Q glutamine           4.8         15           1
 R arginine            3.2         10           1
 S serine              8.6         27           4
 T threonine           3.5         11           2
 V valine              6.4         20           2
 W tryptophan          1.6          5           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family A, 6 
MAGEA6                1.000   melanoma antigen family A, 6 
MAGEA3                0.966   melanoma antigen family A, 3 
MAGEA12               0.844   melanoma antigen family A, 12 
MAGEA2                0.821   melanoma antigen family A, 2 
MAGEA2                0.821   melanoma antigen family A, 2 
MAGEA2                0.821   melanoma antigen family A, 2 
MAGEA2B               0.821   melanoma antigen family A, 2B 
MAGEA4                0.650   melanoma antigen family A, 4 
MAGEA4                0.650   melanoma antigen family A, 4 
MAGEA4                0.650   melanoma antigen family A, 4 
MAGEA4                0.650   melanoma antigen family A, 4 
MAGEA1                0.622   melanoma antigen family A, 1 
MAGEA8                0.585   melanoma antigen family A, 8 
MAGEA11               0.544   melanoma antigen family A, 11 isoform b 
MAGEA11               0.544   melanoma antigen family A, 11 isoform a 
MAGEA9B               0.534   melanoma antigen family A, 9 -like 
MAGEA9                0.534   melanoma antigen family A, 9 
MAGEA10               0.460   melanoma antigen family A, 10 
MAGEA10               0.460   melanoma antigen family A, 10 
MAGEB16               0.342   melanoma antigen family B, 16 
MAGEB4                0.323   melanoma antigen family B, 4 
MAGEB18               0.323   melanoma antigen family B, 18 
MAGEC3                0.317   melanoma antigen family C, 3 isoform 2 
LOC100292575          0.310   PREDICTED: similar to melanoma antigen family C, 2 ...
MAGEC2                0.310   melanoma antigen family C, 2 
MAGEB1                0.304   melanoma antigen family B, 1 
MAGEB1                0.304   melanoma antigen family B, 1 
MAGEB1                0.304   melanoma antigen family B, 1 
MAGEB10               0.302   melanoma antigen family B, 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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