Guide to the Human Genome
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Name: MAGEA4 Sequence: fasta or formatted (317aa) NCBI GI: 58530869
Description:

melanoma antigen family A, 4

Referenced in:

Melanoma Antigen Family

Other entries for this name:
alt mRNA [317aa] melanoma antigen family A, 4
alt mRNA [317aa] melanoma antigen family A, 4
alt mRNA [317aa] melanoma antigen family A, 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         27           2
 C cysteine            1.3          4           1
 D aspartate           2.5          8           1
 E glutamate          13.2         42           4
 F phenylalanine       2.5          8           1
 G glycine             7.3         23           1
 H histidine           1.3          4           1
 I isoleucine          3.5         11           2
 K lysine              4.4         14           1
 L leucine             9.8         31           2
 M methionine          1.6          5           1
 N asparagine          2.8          9           2
 P proline             6.3         20           2
 Q glutamine           4.1         13           1
 R arginine            4.7         15           1
 S serine              8.5         27           4
 T threonine           5.0         16           2
 V valine              7.9         25           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family A, 4 
MAGEA4                1.000   melanoma antigen family A, 4 
MAGEA4                1.000   melanoma antigen family A, 4 
MAGEA4                1.000   melanoma antigen family A, 4 
MAGEA1                0.714   melanoma antigen family A, 1 
MAGEA8                0.663   melanoma antigen family A, 8 
MAGEA6                0.655   melanoma antigen family A, 6 
MAGEA6                0.655   melanoma antigen family A, 6 
MAGEA3                0.650   melanoma antigen family A, 3 
MAGEA12               0.648   melanoma antigen family A, 12 
MAGEA2                0.646   melanoma antigen family A, 2 
MAGEA2                0.646   melanoma antigen family A, 2 
MAGEA2                0.646   melanoma antigen family A, 2 
MAGEA2B               0.646   melanoma antigen family A, 2B 
MAGEA9B               0.595   melanoma antigen family A, 9 -like 
MAGEA9                0.595   melanoma antigen family A, 9 
MAGEA11               0.579   melanoma antigen family A, 11 isoform b 
MAGEA11               0.579   melanoma antigen family A, 11 isoform a 
MAGEA10               0.496   melanoma antigen family A, 10 
MAGEA10               0.496   melanoma antigen family A, 10 
MAGEB16               0.407   melanoma antigen family B, 16 
MAGEB1                0.382   melanoma antigen family B, 1 
MAGEB1                0.382   melanoma antigen family B, 1 
MAGEB1                0.382   melanoma antigen family B, 1 
MAGEB18               0.354   melanoma antigen family B, 18 
MAGEB17               0.350   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.350   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.350   PREDICTED: melanoma antigen family B, 17 
MAGEB3                0.344   melanoma antigen family B, 3 
MAGEB4                0.344   melanoma antigen family B, 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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