Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 64276486

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|64276486 serologically defined colon cancer antigen 10 [Homo
sapiens]
         (472 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|64276486 serologically defined colon cancer antigen 10 [Homo ...   942   0.0  
gi|22547215 peptidylprolyl isomerase-like 2 isoform b [Homo sapi...   158   1e-38
gi|22547212 peptidylprolyl isomerase-like 2 isoform a [Homo sapi...   158   1e-38
gi|7657473 peptidylprolyl isomerase-like 2 isoform a [Homo sapiens]   158   1e-38
gi|19557636 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...   144   1e-34
gi|19557640 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...   144   1e-34
gi|7706339 peptidylprolyl isomerase-like 1 [Homo sapiens]             144   2e-34
gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]            134   2e-31
gi|24308049 peptidylprolyl isomerase domain and WD repeat contai...   131   1e-30
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                 115   1e-25
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]   105   1e-22
gi|5454154 peptidylprolyl isomerase H [Homo sapiens]                  100   2e-21
gi|4505991 peptidylprolyl isomerase C [Homo sapiens]                  100   3e-21
gi|27735045 peptidylprolyl isomerase-like 6 isoform 1 [Homo sapi...    96   5e-20
gi|162329587 peptidylprolyl isomerase-like 6 isoform 2 [Homo sap...    96   5e-20
gi|4758950 peptidylprolyl isomerase B precursor [Homo sapiens]         96   7e-20
gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]        94   3e-19
gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]         94   3e-19
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                  94   3e-19
gi|150418007 RAN binding protein 2 [Homo sapiens]                      93   5e-19
gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]        91   2e-18
gi|4826932 peptidylprolyl isomerase D [Homo sapiens]                   91   3e-18
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...    90   5e-18
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]         89   1e-17
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...    88   2e-17
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...    87   4e-17
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...    86   1e-16
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...    86   1e-16
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...    86   1e-16
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]    84   2e-16

>gi|64276486 serologically defined colon cancer antigen 10 [Homo
           sapiens]
          Length = 472

 Score =  942 bits (2435), Expect = 0.0
 Identities = 472/472 (100%), Positives = 472/472 (100%)

Query: 1   MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPG 60
           MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPG
Sbjct: 1   MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPG 60

Query: 61  FIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRA 120
           FIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRA
Sbjct: 61  FIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRA 120

Query: 121 DELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIK 180
           DELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIK
Sbjct: 121 DELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIK 180

Query: 181 RLKKEKPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKDDP 240
           RLKKEKPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKDDP
Sbjct: 181 RLKKEKPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKDDP 240

Query: 241 HLSSVPVVESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKKDTSANVKSA 300
           HLSSVPVVESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKKDTSANVKSA
Sbjct: 241 HLSSVPVVESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKKDTSANVKSA 300

Query: 301 GEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQAEKRSEEEEAPPDGAVAEY 360
           GEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQAEKRSEEEEAPPDGAVAEY
Sbjct: 301 GEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQAEKRSEEEEAPPDGAVAEY 360

Query: 361 RREKQKYEALRKQQSKKGTSREDQTLALLNQFKSKLTQAIAETPENDIPETEVEDDEGWM 420
           RREKQKYEALRKQQSKKGTSREDQTLALLNQFKSKLTQAIAETPENDIPETEVEDDEGWM
Sbjct: 361 RREKQKYEALRKQQSKKGTSREDQTLALLNQFKSKLTQAIAETPENDIPETEVEDDEGWM 420

Query: 421 SHVLQFEDKSRKVKDASMQDSDTFEIYDPRNPVNKRRREESKKLMREKKERR 472
           SHVLQFEDKSRKVKDASMQDSDTFEIYDPRNPVNKRRREESKKLMREKKERR
Sbjct: 421 SHVLQFEDKSRKVKDASMQDSDTFEIYDPRNPVNKRRREESKKLMREKKERR 472


>gi|22547215 peptidylprolyl isomerase-like 2 isoform b [Homo
           sapiens]
          Length = 527

 Score =  158 bits (399), Expect = 1e-38
 Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 9/191 (4%)

Query: 13  GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTG 72
           G V L T  GD+++EL     PK C NFI+LC + YYD TIFHR +  F++QGGDPTGTG
Sbjct: 280 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTG 339

Query: 73  SGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGK 132
           +GGES +G PFKDEF   L    RG+++MAN+G + N SQFF T      L+ KHTIFG+
Sbjct: 340 TGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGR 399

Query: 133 VTGDTVYNMLRLSEVDIDDD---ERPHNPHKIKSCEVLFNPFDDI---IPREIKRLKKEK 186
           V G   +++L   E +++ D   +RP    +I +  V  +P+++    I +E K   K  
Sbjct: 400 VVGG--FDVLTAME-NVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVA 456

Query: 187 PEEEVKKLKPK 197
           PE +VK  +P+
Sbjct: 457 PETKVKSSQPQ 467


>gi|22547212 peptidylprolyl isomerase-like 2 isoform a [Homo
           sapiens]
          Length = 520

 Score =  158 bits (399), Expect = 1e-38
 Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 9/191 (4%)

Query: 13  GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTG 72
           G V L T  GD+++EL     PK C NFI+LC + YYD TIFHR +  F++QGGDPTGTG
Sbjct: 280 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTG 339

Query: 73  SGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGK 132
           +GGES +G PFKDEF   L    RG+++MAN+G + N SQFF T      L+ KHTIFG+
Sbjct: 340 TGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGR 399

Query: 133 VTGDTVYNMLRLSEVDIDDD---ERPHNPHKIKSCEVLFNPFDDI---IPREIKRLKKEK 186
           V G   +++L   E +++ D   +RP    +I +  V  +P+++    I +E K   K  
Sbjct: 400 VVGG--FDVLTAME-NVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVA 456

Query: 187 PEEEVKKLKPK 197
           PE +VK  +P+
Sbjct: 457 PETKVKSSQPQ 467


>gi|7657473 peptidylprolyl isomerase-like 2 isoform a [Homo sapiens]
          Length = 520

 Score =  158 bits (399), Expect = 1e-38
 Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 9/191 (4%)

Query: 13  GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTG 72
           G V L T  GD+++EL     PK C NFI+LC + YYD TIFHR +  F++QGGDPTGTG
Sbjct: 280 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTG 339

Query: 73  SGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGK 132
           +GGES +G PFKDEF   L    RG+++MAN+G + N SQFF T      L+ KHTIFG+
Sbjct: 340 TGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGR 399

Query: 133 VTGDTVYNMLRLSEVDIDDD---ERPHNPHKIKSCEVLFNPFDDI---IPREIKRLKKEK 186
           V G   +++L   E +++ D   +RP    +I +  V  +P+++    I +E K   K  
Sbjct: 400 VVGG--FDVLTAME-NVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERKTQLKVA 456

Query: 187 PEEEVKKLKPK 197
           PE +VK  +P+
Sbjct: 457 PETKVKSSQPQ 467


>gi|19557636 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo
           sapiens]
          Length = 161

 Score =  144 bits (364), Expect = 1e-34
 Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 15  VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSG 74
           V L T  GDI IE++ +  PK C NF+ LC   YY+  IFHR + GF+VQ GDPTGTG G
Sbjct: 3   VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62

Query: 75  GESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT 134
           G SI+G  F+DE+   L+ N RG+V+MAN G + NGSQFF T G+   L+ K+T+FGKV 
Sbjct: 63  GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI 122

Query: 135 GDTVYNMLRLSEVDIDDDE-RPHNPHKIKSCEVLFNPF 171
            D +  +  L ++ +++   RP N   IK   +  NPF
Sbjct: 123 -DGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 159


>gi|19557640 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo
           sapiens]
          Length = 161

 Score =  144 bits (364), Expect = 1e-34
 Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 15  VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSG 74
           V L T  GDI IE++ +  PK C NF+ LC   YY+  IFHR + GF+VQ GDPTGTG G
Sbjct: 3   VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62

Query: 75  GESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT 134
           G SI+G  F+DE+   L+ N RG+V+MAN G + NGSQFF T G+   L+ K+T+FGKV 
Sbjct: 63  GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI 122

Query: 135 GDTVYNMLRLSEVDIDDDE-RPHNPHKIKSCEVLFNPF 171
            D +  +  L ++ +++   RP N   IK   +  NPF
Sbjct: 123 -DGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 159


>gi|7706339 peptidylprolyl isomerase-like 1 [Homo sapiens]
          Length = 166

 Score =  144 bits (363), Expect = 2e-34
 Identities = 74/154 (48%), Positives = 99/154 (64%), Gaps = 4/154 (2%)

Query: 8   EPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGD 67
           +PP    V L+T+ G I +EL+ K APK C+NF +L    YY+ T FHR++  F++QGGD
Sbjct: 10  QPPN---VYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGD 66

Query: 68  PTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKH 127
           PTGTG GG SIYG  F+DE H  L+F   G++AMANAG   NGSQFF TL     L+ KH
Sbjct: 67  PTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKH 126

Query: 128 TIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKI 161
           TIFG+V    +  + R+  V+ +  +RP +  KI
Sbjct: 127 TIFGRVC-QGIGMVNRVGMVETNSQDRPVDDVKI 159


>gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]
          Length = 492

 Score =  134 bits (336), Expect = 2e-31
 Identities = 85/251 (33%), Positives = 132/251 (52%), Gaps = 29/251 (11%)

Query: 15  VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSG 74
           VLL+TT GD+ I+L+++E P+AC NF++LC   YY+  + H V   FI+Q GDPTGTG G
Sbjct: 3   VLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRG 62

Query: 75  GESIYGAPFKD-------EFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLG-RADELNNK 126
           GESI+G  + D       E   R++  ++G V+M N GS  +GSQF  T G   D L+  
Sbjct: 63  GESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGV 122

Query: 127 HTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIKRLKKEK 186
           HT+FG+VT + +  + +++E  +D D  P+   +I    +L +PFDD             
Sbjct: 123 HTVFGEVT-EGMDIIKKINETFVDKDFVPYQDIRINHTVILDDPFDD------------P 169

Query: 187 PEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKDDPHLSSVP 246
           P+  +    P+ T+    L  G    +EE +        KG+S    + +K +    +  
Sbjct: 170 PDLLIPDRSPEPTR--EQLDSGRIGADEEID------DFKGRSAEEVEEIKAEKEAKTQA 221

Query: 247 VVESEKGDAPD 257
           ++    GD PD
Sbjct: 222 ILLEMVGDLPD 232


>gi|24308049 peptidylprolyl isomerase domain and WD repeat
           containing 1 [Homo sapiens]
          Length = 646

 Score =  131 bits (330), Expect = 1e-30
 Identities = 62/119 (52%), Positives = 82/119 (68%)

Query: 16  LLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGG 75
           ++ T+ GDI  +L+  E PK   NF       YY+   FHR++ GF++Q GDPTGTG GG
Sbjct: 495 IIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGG 554

Query: 76  ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT 134
           ESI+G  F+DEFHS LR +R   ++MANAGS+ NGSQFF T+     L+NKHT+FG+VT
Sbjct: 555 ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT 613


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score =  115 bits (287), Expect = 1e-25
 Identities = 123/480 (25%), Positives = 194/480 (40%), Gaps = 88/480 (18%)

Query: 21  AGDIDIELWSKEAPKACRNFIQLCL-----------EAYYDNTIFHRVVPGFIVQGGD-P 68
           AG +  EL+S   PK C NF  LC              +Y + +FHRVV  F+VQGGD  
Sbjct: 21  AGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFS 80

Query: 69  TGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHT 128
            G G GGESIYG  F+DE  + ++ N+  L++MAN G   NGSQFF T      L+  H 
Sbjct: 81  EGNGRGGESIYGGFFEDESFA-VKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHV 139

Query: 129 IFGKV-TGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIKRLKKEKP 187
           +FG+V +G  V   +   + D     +P    +I SC  L                   P
Sbjct: 140 VFGQVISGQEVVREIENQKTDA--ASKPFAEVRILSCGELI------------------P 179

Query: 188 EEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKDDPHLSSVPV 247
           + +VKK                     EE+    S S    S S  D   D         
Sbjct: 180 KSKVKK---------------------EEKKRHKSSSSSSSSSSDSDSSSD--------- 209

Query: 248 VESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKKDTSANVKSAGEGEVEK 307
                 D+ D     E++S +  +    + +   +E+  +K  K ++++   A   E + 
Sbjct: 210 -SQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQP 268

Query: 308 KSVSRSEELR--KEARQLKRELLAAKQKKVENAAKQAEKRSEEEEAPPDGAVAEYRREKQ 365
           +S  R EE+    E R L R+   +  K  E   K  E+  E E  PP+   A Y+R   
Sbjct: 269 QSTVRPEEIPPIPENRFLMRK---SPPKADEKERKNRERERERECNPPNSQPASYQR--- 322

Query: 366 KYEALRKQQSKKGTSREDQTLALLNQFKSKLTQAIAETPENDIPETE------VEDDEGW 419
               L  +  +K   R  +     ++ +S+     +ETP +   E +      V   E W
Sbjct: 323 --RLLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERW 380

Query: 420 M----SHVLQFEDKSR---KVKDASMQDSDTFEIYDPRNPVNKRRREESKKLMREKKERR 472
           +    S + + ++  R   +VK+  + D         R    +++ ++ K   +E+  RR
Sbjct: 381 IKGDKSELNEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRR 440



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 49/263 (18%), Positives = 108/263 (41%), Gaps = 11/263 (4%)

Query: 214 EEEEVNRVSQSMKGKSKSSHDLLKDDPHLSSVPVVESEKGDAPDLVDDGEDESAEHDEYI 273
           ++ E+N + ++ +   +     + D  ++S  P   + K +    V D +  S E D   
Sbjct: 384 DKSELNEIKENQRSPVRVKERKITDHRNVSESP---NRKNEKEKKVKDHKSNSKERDIRR 440

Query: 274 DGDEKNLMRERIAKKLKKDTSANVKSAGEGEVEKKSVSRSEELRKEARQLKRELLAAKQK 333
           + ++ +  + ++ K+ K  + +  K   + +      +R+EE R  +R   R+    K+K
Sbjct: 441 NSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEK 500

Query: 334 KVENAAK---QAEKRSEEEEAPPDGAVAEYRREKQKYEALRKQQSKKGTSREDQTLALLN 390
           + ++ +K   Q   RS+E+    +    E+   K K E  R+ QS+   SRE       +
Sbjct: 501 EKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSK-EKDRRAQSR---SRECDITKGKH 556

Query: 391 QFKSKLTQAIAETPENDIPETEVED-DEGWMSHVLQFEDKSRKVKDASMQDSDTFEIYDP 449
            + S+  +       +    +   D D        ++ ++  + +  S            
Sbjct: 557 SYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRS 616

Query: 450 RNPVNKRRREESKKLMREKKERR 472
           R+   +RRR +S+   RE+ + R
Sbjct: 617 RSKDRRRRRRDSRSSEREESQSR 639


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score =  105 bits (261), Expect = 1e-22
 Identities = 76/222 (34%), Positives = 108/222 (48%), Gaps = 26/222 (11%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCL-----------EAYYDNTIFHRVVPGFIVQGGD-PT 69
           G I  +L+S   PK C+NF+ LC            +  Y  + FHRVV  F++QGGD   
Sbjct: 21  GRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 80

Query: 70  GTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTI 129
           G G GGESIYG  FKDE +  L+ +R  L++MAN G H NGSQFF T   A  L+  H +
Sbjct: 81  GNGKGGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVV 139

Query: 130 FGKV-TGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPREIKRLKKEKPE 188
           FG V +G  V    ++  +  D   RP+   ++  C VL            K +K    +
Sbjct: 140 FGLVISGFEVIE--QIENLKTDAASRPYADVRVIDCGVL----------ATKSIKDVFEK 187

Query: 189 EEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSK 230
           +  K    +G+ + S  S   E+  E E  +  S+  K K +
Sbjct: 188 KRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRR 229



 Score = 35.4 bits (80), Expect = 0.11
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 180  KRLKKEKPEEEVKKLKPKGTKNFSL------------LSFGEEAEEEEEEVNRVSQSMKG 227
            + LK+E  ++  +KLK K  K                L FGEE EEE ++     +S + 
Sbjct: 983  ENLKREHTKKVKEKLKGKKDKKHKAPKRKQAFHWQPPLEFGEEEEEEIDDKQVTQESKEK 1042

Query: 228  KSKSSHDLLKDDPHLSSVPVVESEKGDAPDL--VDDGEDESAEHDEYIDGDEK 278
            K   +++ +KD+       ++++EK    DL    D    S++ D++   D K
Sbjct: 1043 KVSENNETIKDN-------ILKTEKSSEEDLSGKHDTVTVSSDLDQFTKDDSK 1088


>gi|5454154 peptidylprolyl isomerase H [Homo sapiens]
          Length = 177

 Score =  100 bits (250), Expect = 2e-21
 Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 11/152 (7%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY--------YDNTIFHRVVPGFIVQGGD-PTGTG 72
           G + IEL++   PK   NF Q C   +        Y  + FHRV+  F++QGGD   G G
Sbjct: 25  GRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDG 84

Query: 73  SGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGK 132
           +G  SIY  PF DE + +LR +  GL++MAN+G   NG QFF T  + D L+ KH +FGK
Sbjct: 85  TGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGK 143

Query: 133 VTGDTVYNMLRLSEVDIDDDERPHNPHKIKSC 164
           +  D +  M ++  V    + +P  P  I  C
Sbjct: 144 II-DGLLVMRKIENVPTGPNNKPKLPVVISQC 174


>gi|4505991 peptidylprolyl isomerase C [Homo sapiens]
          Length = 212

 Score =  100 bits (249), Expect = 3e-21
 Identities = 66/153 (43%), Positives = 83/153 (54%), Gaps = 11/153 (7%)

Query: 9   PPTNGKVLLKTTAGDID-----IELWSKEAPKACRNFIQLCL--EAY-YDNTIFHRVVPG 60
           P    KV      GD D     I L+ K  PK   NF+ L    + Y Y  + FHRV+  
Sbjct: 34  PSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKD 93

Query: 61  FIVQGGD-PTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGR 119
           F++QGGD  TG G+GG SIYG  F DE + +L+    G V+MANAG   NGSQFF TL +
Sbjct: 94  FMIQGGDITTGDGTGGVSIYGETFPDE-NFKLKHYGIGWVSMANAGPDTNGSQFFITLTK 152

Query: 120 ADELNNKHTIFGKV-TGDTVYNMLRLSEVDIDD 151
              L+ KH +FGKV  G TV + + L   D  D
Sbjct: 153 PTWLDGKHVVFGKVIDGMTVVHSIELQATDGHD 185


>gi|27735045 peptidylprolyl isomerase-like 6 isoform 1 [Homo
           sapiens]
          Length = 311

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 14/145 (9%)

Query: 22  GDIDIELWSKEAPKACRNFIQLC----------LEAYYDNTIFHRVVPGFIVQGGDPT-G 70
           G +  EL+    PK C+NF  LC          +  +Y N+IFHR+V    +QGGD   G
Sbjct: 156 GRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYG 215

Query: 71  TGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIF 130
            G  GESIYG  F+DE  S +  N+RG++ MAN G H NGSQF+ TL     L+ K   F
Sbjct: 216 KGDNGESIYGPTFEDENFS-VPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAF 274

Query: 131 GKVTGDTVYNMLRLSEVDIDDDERP 155
           G++   T   +L+  E+    +ERP
Sbjct: 275 GQLIEGT--EVLKQLELVPTQNERP 297


>gi|162329587 peptidylprolyl isomerase-like 6 isoform 2 [Homo
           sapiens]
          Length = 279

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 14/145 (9%)

Query: 22  GDIDIELWSKEAPKACRNFIQLC----------LEAYYDNTIFHRVVPGFIVQGGDPT-G 70
           G +  EL+    PK C+NF  LC          +  +Y N+IFHR+V    +QGGD   G
Sbjct: 124 GRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYG 183

Query: 71  TGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIF 130
            G  GESIYG  F+DE  S +  N+RG++ MAN G H NGSQF+ TL     L+ K   F
Sbjct: 184 KGDNGESIYGPTFEDENFS-VPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAF 242

Query: 131 GKVTGDTVYNMLRLSEVDIDDDERP 155
           G++   T   +L+  E+    +ERP
Sbjct: 243 GQLIEGT--EVLKQLELVPTQNERP 265


>gi|4758950 peptidylprolyl isomerase B precursor [Homo sapiens]
          Length = 216

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 68/189 (35%), Positives = 92/189 (48%), Gaps = 28/189 (14%)

Query: 9   PPTNGKVLLKTTAGDIDIE-----LWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPG 60
           P    KV      GD D+      L+ K  PK   NF+ L        Y N+ FHRV+  
Sbjct: 40  PKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKD 99

Query: 61  FIVQGGDPT-GTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGR 119
           F++QGGD T G G+GG+SIYG  F DE + +L+    G V+MANAG   NGSQFF T  +
Sbjct: 100 FMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMANAGKDTNGSQFFITTVK 158

Query: 120 ADELNNKHTIFGKV-TGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPRE 178
              L+ KH +FGKV  G  V   +  ++ D  D                  P  D+I  +
Sbjct: 159 TAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRD-----------------KPLKDVIIAD 201

Query: 179 IKRLKKEKP 187
             +++ EKP
Sbjct: 202 CGKIEVEKP 210


>gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]
          Length = 235

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 21  AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGE 76
           AG I + L S   P    NF  LC       +  + FHR++P F+ QGGD T   G+GG+
Sbjct: 87  AGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGK 146

Query: 77  SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGD 136
           SIYG  F DE +  L+    GL++MAN+G + NGSQFF T  + D L+ KH +FG+VT  
Sbjct: 147 SIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEG 205

Query: 137 TVYNMLRLSEVDIDDDERPHNPHKIKSC 164
              ++LR  E     D +P     I  C
Sbjct: 206 --LDVLRQIEAQGSKDGKPKQKVIIADC 231


>gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]
          Length = 301

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 21  AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGE 76
           AG I + L S   P    NF  LC       +  + FHR++P F+ QGGD T   G+GG+
Sbjct: 153 AGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGK 212

Query: 77  SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGD 136
           SIYG  F DE +  L+    GL++MAN+G + NGSQFF T  + D L+ KH +FG+VT  
Sbjct: 213 SIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEG 271

Query: 137 TVYNMLRLSEVDIDDDERPHNPHKIKSC 164
              ++LR  E     D +P     I  C
Sbjct: 272 --LDVLRQIEAQGSKDGKPKQKVIIADC 297


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 5/116 (4%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGES 77
           G +  EL++ + PK   NF  L        Y  + FHR++PGF+ QGGD T   G+GG+S
Sbjct: 18  GRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
           IYG  F+DE +  L+    G+++MANAG + NGSQFF    + + L+ KH +FGKV
Sbjct: 78  IYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 52/116 (44%), Positives = 72/116 (62%), Gaps = 5/116 (4%)

Query: 22   GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGES 77
            G I +EL+S   P+   NF  LC       + N+IFHRV+P F+ QGGD T   G+GG+S
Sbjct: 3078 GRITMELFSNIVPRTAENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQS 3137

Query: 78   IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
            IYG  F+DE +  ++    GL++MAN G + N SQF  TL +A+ L+ KH +FG V
Sbjct: 3138 IYGDKFEDE-NFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFV 3192


>gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]
          Length = 296

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 5/118 (4%)

Query: 21  AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGE 76
           AG I + L S   P    NF  LC       +  + FHR++P F+ QGGD T   G+GG+
Sbjct: 153 AGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGK 212

Query: 77  SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT 134
           SIYG  F DE +  L+    GL++MAN+G + NGSQFF T  + D L+ KH +FG+VT
Sbjct: 213 SIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT 269


>gi|4826932 peptidylprolyl isomerase D [Homo sapiens]
          Length = 370

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 52/125 (41%), Positives = 72/125 (57%), Gaps = 15/125 (12%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCL-----------EAYYDNTIFHRVVPGFIVQGGDPTG 70
           G I +EL++   PK   NF  LC              ++    FHR++  F++QGGD + 
Sbjct: 30  GRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSN 89

Query: 71  -TGSGGESIYGAPFKDE-FHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHT 128
             G+GGESIYG  F+DE FH   + +R GL++MANAG + NGSQFF T      L+ KH 
Sbjct: 90  QNGTGGESIYGEKFEDENFH--YKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHV 147

Query: 129 IFGKV 133
           +FG+V
Sbjct: 148 VFGQV 152


>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
           sapiens]
          Length = 165

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 6/162 (3%)

Query: 15  VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEA---YYDNTIFHRVVPGFI-VQGGDPTG 70
           V L T  GDI IE++ +  PK C    +   +A   + D        PGF  V       
Sbjct: 3   VTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPR 62

Query: 71  TGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIF 130
           TG GG SI+G  F+DE+   L+ N RG+V+MAN G + NGSQFF T G+   L+ K+T+F
Sbjct: 63  TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVF 122

Query: 131 GKVTGDTVYNMLRLSEVDIDDDE-RPHNPHKIKSCEVLFNPF 171
           GKV  D +  +  L ++ +++   RP N   IK   +  NPF
Sbjct: 123 GKVI-DGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 163


>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 54/126 (42%), Positives = 72/126 (57%), Gaps = 10/126 (7%)

Query: 12  NGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDP 68
           NGK L     G + +EL +   PK   NF  LC       Y  + FHRV+P F+ Q GD 
Sbjct: 55  NGKPL-----GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDF 109

Query: 69  TG-TGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKH 127
           T   G+GG+SIYG+ F DE +  L+    G+++MANAG + NGSQFF    + D L+ KH
Sbjct: 110 TNHNGTGGKSIYGSRFPDE-NFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKH 168

Query: 128 TIFGKV 133
            +FG V
Sbjct: 169 VVFGHV 174


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 5/116 (4%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGES 77
           G I I+L++ + PK   NF  L        Y  + FHR++PGF+ QGGD T   G+G +S
Sbjct: 18  GRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
           IYG  F DE   R +    G+++MANAG + NGSQFF    + + L+ KH  FGKV
Sbjct: 78  IYGEKFDDENLIR-KHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKV 132


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 11/177 (6%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPT-GTGSGGES 77
           G +   +++ +  K  +NF  L        Y  + FHR++PGF+ QGGD T   G+GG+S
Sbjct: 18  GHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQGGDFTYNNGTGGKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDT 137
           +YG  F DE +  L+  R G+++MA AG + NGSQFF    + + L  KH +FGKV    
Sbjct: 78  LYGEKFDDE-NFILKRIRPGILSMAKAGPNTNGSQFFICTAKTEWLIGKHVVFGKVKEG- 135

Query: 138 VYNMLRLSEVDIDDDERPHNPHKIKSCE---VLFNP-FDDIIPREIKRLKKEKPEEE 190
             N++   E     + +      I  C    +L +P  DD++   + R+   KP E+
Sbjct: 136 -MNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAVSRVASLKPPEQ 191


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 5/116 (4%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTG-TGSGGES 77
           G I I+ ++ + PK   NF  L        Y  + FHR++PGF+ QGGD T   G+G +S
Sbjct: 18  GRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
           IYG  F DE   R +    G+++MANAG + NGSQFF    + + L+ KH  FGKV
Sbjct: 78  IYGEKFDDENLIR-KHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKV 132


>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPT-GTGSGGES 77
           G +   +++ +  K  +NF  L        Y  + FHR++PGF+ QGGD T   G+GG+S
Sbjct: 18  GHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQGGDFTYNNGTGGKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDT 137
           +YG  F DE +  L+  R G+++MA AG + NGSQFF      + L  KH +FGKV    
Sbjct: 78  LYGEKFDDE-NFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLIGKHVVFGKVKEG- 135

Query: 138 VYNMLRLSEVDIDDDERPHNPHKIKSCE---VLFNP-FDDIIPREIKRLKKEKPEEE 190
             N++   E     + +      I  C    +L +P  DD++   + R+   KP E+
Sbjct: 136 -MNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAVSRVASLKPPEQ 191


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPT-GTGSGGES 77
           G +   +++ +  K  +NF  L        Y  + FHR++PGF+ QGGD T   G+GG+S
Sbjct: 18  GHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQGGDFTYNNGTGGKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDT 137
           +YG  F DE +  L+  R G+++MA AG + NGSQFF      + L  KH +FGKV    
Sbjct: 78  LYGEKFDDE-NFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLIGKHVVFGKVKEG- 135

Query: 138 VYNMLRLSEVDIDDDERPHNPHKIKSCE---VLFNP-FDDIIPREIKRLKKEKPEEE 190
             N++   E     + +      I  C    +L +P  DD++   + R+   KP E+
Sbjct: 136 -MNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAVSRVASLKPPEQ 191


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 5/116 (4%)

Query: 22  GDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPT-GTGSGGES 77
           G I  EL++ + PK   NF  L        Y    FHR++PGF+  GGD T   G+GG+S
Sbjct: 18  GRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGFMCHGGDFTHHNGTGGKS 77

Query: 78  IYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133
           IYG    D+ +  L+    G+++MANAG + NGSQFF    +++ L++KH + GKV
Sbjct: 78  IYGEKVDDD-NFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWLDSKHVVIGKV 132


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.129    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,344,766
Number of Sequences: 37866
Number of extensions: 972906
Number of successful extensions: 9740
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 985
Number of HSP's that attempted gapping in prelim test: 5362
Number of HSP's gapped (non-prelim): 3408
length of query: 472
length of database: 18,247,518
effective HSP length: 106
effective length of query: 366
effective length of database: 14,233,722
effective search space: 5209542252
effective search space used: 5209542252
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press