Guide to the Human Genome
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Name: PPIL1 Sequence: fasta or formatted (166aa) NCBI GI: 7706339
Description:

peptidylprolyl isomerase-like 1

Referenced in:

Peptidylprolyl Isomerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         12           2
 C cysteine            1.2          2           1
 D aspartate           6.0         10           2
 E glutamate           3.6          6           1
 F phenylalanine       4.8          8           2
 G glycine            12.0         20           2
 H histidine           2.4          4           1
 I isoleucine          7.2         12           2
 K lysine              6.0         10           1
 L leucine             5.4          9           1
 M methionine          3.6          6           1
 N asparagine          4.2          7           1
 P proline             6.6         11           2
 Q glutamine           4.2          7           1
 R arginine            4.2          7           2
 S serine              3.6          6           1
 T threonine           6.6         11           1
 V valine              5.4          9           1
 W tryptophan          1.8          3           1
 Y tyrosine            3.6          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase-like 1 
PPWD1                 0.434   peptidylprolyl isomerase domain and WD repeat contai...
PPIL2                 0.406   peptidylprolyl isomerase-like 2 isoform b 
PPIL2                 0.406   peptidylprolyl isomerase-like 2 isoform a 
PPIL2                 0.406   peptidylprolyl isomerase-like 2 isoform a 
PPIC                  0.385   peptidylprolyl isomerase C 
PPIL3                 0.375   peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...
PPIL3                 0.375   peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...
PPIB                  0.369   peptidylprolyl isomerase B precursor 
SDCCAG10              0.366   serologically defined colon cancer antigen 10 
PPIA                  0.314   peptidylprolyl isomerase A 
PPIF                  0.298   peptidylprolyl isomerase F precursor 
PPIL4                 0.295   peptidylprolyl isomerase-like 4 
NKTR                  0.292   natural killer-tumor recognition sequence 
PPID                  0.289   peptidylprolyl isomerase D 
PPIG                  0.289   peptidylprolyl isomerase G 
PPIE                  0.286   peptidylprolyl isomerase E isoform 2 
PPIE                  0.286   peptidylprolyl isomerase E isoform 3 
PPIE                  0.286   peptidylprolyl isomerase E isoform 1 
PPIAL4E               0.283   peptidylprolyl isomerase A (cyclophilin A)-like 4E ...
PPIH                  0.280   peptidylprolyl isomerase H 
PPIAL4G               0.277   peptidylprolyl isomerase A (cyclophilin A)-like 4G ...
LOC643997             0.274   PREDICTED: similar to TRIMCyp isoform 1 
LOC643997             0.274   PREDICTED: similar to TRIMCyp isoform 2 
LOC643997             0.274   PREDICTED: similar to peptidylprolyl isomerase A iso...
PPIAL4B               0.271   peptidylprolyl isomerase A (cyclophilin A)-like 4B ...
PPIAL4A               0.271   peptidylprolyl isomerase A-like 4A 
PPIAL4C               0.271   peptidylprolyl isomerase A (cyclophilin A)-like 4C ...
LOC126170             0.262   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC126170             0.262   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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