Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPIL2 Sequence: fasta or formatted (527aa) NCBI GI: 22547215
Description:

peptidylprolyl isomerase-like 2 isoform b

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [520aa] peptidylprolyl isomerase-like 2 isoform a
alt prot [520aa] peptidylprolyl isomerase-like 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         29           3
 C cysteine            1.7          9           1
 D aspartate           6.1         32           2
 E glutamate           5.7         30           2
 F phenylalanine       5.1         27           2
 G glycine             6.5         34           2
 H histidine           2.8         15           1
 I isoleucine          4.4         23           2
 K lysine              8.7         46           3
 L leucine             6.8         36           2
 M methionine          1.3          7           1
 N asparagine          5.5         29           2
 P proline             6.6         35           1
 Q glutamine           4.4         23           2
 R arginine            4.9         26           2
 S serine              5.9         31           2
 T threonine           7.8         41           2
 V valine              5.9         31           2
 W tryptophan          0.4          2           1
 Y tyrosine            4.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase-like 2 isoform b 
PPIL2                 0.928   peptidylprolyl isomerase-like 2 isoform a 
PPIL2                 0.928   peptidylprolyl isomerase-like 2 isoform a 
PPIL3                 0.149   peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...
PPIL3                 0.149   peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...
SDCCAG10              0.125   serologically defined colon cancer antigen 10 
PPIL1                 0.124   peptidylprolyl isomerase-like 1 
PPWD1                 0.120   peptidylprolyl isomerase domain and WD repeat contai...
PPIL4                 0.091   peptidylprolyl isomerase-like 4 
PPIL3                 0.089   peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...
NKTR                  0.089   natural killer-tumor recognition sequence 
PPIH                  0.088   peptidylprolyl isomerase H 
PPIE                  0.087   peptidylprolyl isomerase E isoform 2 
PPIE                  0.085   peptidylprolyl isomerase E isoform 3 
PPIE                  0.085   peptidylprolyl isomerase E isoform 1 
PPIA                  0.082   peptidylprolyl isomerase A 
PPID                  0.082   peptidylprolyl isomerase D 
PPIF                  0.082   peptidylprolyl isomerase F precursor 
PPIL6                 0.081   peptidylprolyl isomerase-like 6 isoform 1 
PPIL6                 0.081   peptidylprolyl isomerase-like 6 isoform 2 
PPIC                  0.081   peptidylprolyl isomerase C 
PPIG                  0.079   peptidylprolyl isomerase G 
RANBP2                0.078   RAN binding protein 2 
PPIB                  0.077   peptidylprolyl isomerase B precursor 
LOC643997             0.073   PREDICTED: similar to TRIMCyp isoform 1 
LOC643997             0.073   PREDICTED: similar to TRIMCyp isoform 2 
LOC643997             0.073   PREDICTED: similar to peptidylprolyl isomerase A iso...
PPIAL4G               0.071   peptidylprolyl isomerase A (cyclophilin A)-like 4G ...
PPIAL4E               0.071   peptidylprolyl isomerase A (cyclophilin A)-like 4E ...
PPIAL4B               0.070   peptidylprolyl isomerase A (cyclophilin A)-like 4B ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press