Search of human proteins with 63054852

Search of human proteins with 63054852

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|63054852 terminal deoxynucleotidyltransferase isoform 2
[Homo sapiens]
         (508 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|63054852 terminal deoxynucleotidyltransferase isoform 2 [Homo...  1019   0.0  
gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo...  1014   0.0  
gi|7019493 DNA-directed DNA polymerase mu [Homo sapiens]              373   e-103
gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens]          120   3e-27
gi|4505931 DNA-directed DNA polymerase beta [Homo sapiens]             91   2e-18
gi|7706645 protein phosphatase methylesterase 1 [Homo sapiens]         31   2.3  
gi|214831834 transmembrane protein 169 [Homo sapiens]                  31   3.0  
gi|19923913 transmembrane protein 169 [Homo sapiens]                   31   3.0  
gi|214831799 transmembrane protein 169 [Homo sapiens]                  31   3.0  
gi|214831780 transmembrane protein 169 [Homo sapiens]                  31   3.0  
gi|239757716 PREDICTED: hypothetical protein [Homo sapiens]            30   4.0  
gi|239752203 PREDICTED: hypothetical protein [Homo sapiens]            30   4.0  
gi|239746726 PREDICTED: hypothetical protein [Homo sapiens]            30   4.0  
gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho...    30   6.8  
gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho...    30   6.8  
gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Ho...    30   6.8  
gi|145553976 zinc finger, CW type with coiled-coil domain 2 isof...    30   6.8  
gi|145553971 zinc finger, CW type with coiled-coil domain 2 isof...    30   6.8  
gi|169202726 PREDICTED: similar to ring finger protein 18 isofor...    29   8.8  
gi|239755488 PREDICTED: similar to ring finger protein 18 isofor...    29   8.8  
gi|169203362 PREDICTED: similar to ring finger protein 18 [Homo ...    29   8.8  
gi|27484954 PREDICTED: similar to ring finger protein 18 [Homo s...    29   8.8  
gi|115648142 centrosomal protein 164kDa [Homo sapiens]                 29   8.8  
gi|31377566 ring finger protein 168 [Homo sapiens]                     29   8.8  

>gi|63054852 terminal deoxynucleotidyltransferase isoform 2 [Homo
           sapiens]
          Length = 508

 Score = 1019 bits (2635), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60
           MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG
Sbjct: 1   MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60

Query: 61  FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120
           FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT
Sbjct: 61  FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120

Query: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180
           GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE
Sbjct: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180

Query: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240
           FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV
Sbjct: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240

Query: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300
           LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV
Sbjct: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300

Query: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360
           SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL
Sbjct: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360

Query: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420
           LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS
Sbjct: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420

Query: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRFERDLRRYATHERKMILDNHALYDKTK 480
           WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRFERDLRRYATHERKMILDNHALYDKTK
Sbjct: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRFERDLRRYATHERKMILDNHALYDKTK 480

Query: 481 RIFLKAESEEEIFAHLGLDYIEPWERNA 508
           RIFLKAESEEEIFAHLGLDYIEPWERNA
Sbjct: 481 RIFLKAESEEEIFAHLGLDYIEPWERNA 508


>gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo
           sapiens]
          Length = 509

 Score = 1014 bits (2623), Expect = 0.0
 Identities = 508/509 (99%), Positives = 508/509 (99%), Gaps = 1/509 (0%)

Query: 1   MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60
           MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG
Sbjct: 1   MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60

Query: 61  FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120
           FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT
Sbjct: 61  FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120

Query: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180
           GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE
Sbjct: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180

Query: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240
           FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV
Sbjct: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240

Query: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300
           LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV
Sbjct: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300

Query: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360
           SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL
Sbjct: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360

Query: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420
           LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS
Sbjct: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420

Query: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSR-FERDLRRYATHERKMILDNHALYDKT 479
           WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSR FERDLRRYATHERKMILDNHALYDKT
Sbjct: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKT 480

Query: 480 KRIFLKAESEEEIFAHLGLDYIEPWERNA 508
           KRIFLKAESEEEIFAHLGLDYIEPWERNA
Sbjct: 481 KRIFLKAESEEEIFAHLGLDYIEPWERNA 509


>gi|7019493 DNA-directed DNA polymerase mu [Homo sapiens]
          Length = 494

 Score =  373 bits (958), Expect = e-103
 Identities = 206/507 (40%), Positives = 313/507 (61%), Gaps = 24/507 (4%)

Query: 11  PRKKRPR---QTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKGFRVENEL 67
           P+++R R    +G   +S+P   +F  + ++++E +MG +RRAFL  LAR KGFRV +  
Sbjct: 3   PKRRRARVGSPSGDAASSTPPSTRFPGVAIYLVEPRMGRSRRAFLTGLARSKGFRVLDAC 62

Query: 68  SDSVTHIVAENNSGSDVLEWLQAQKVQVS---SQPELLDVSWLIECIRAGKPVEMTGKHQ 124
           S   TH+V E  S  + + W + +        + P LLD+SWL E + AG+PV +  +H+
Sbjct: 63  SSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTESLGAGQPVPVECRHR 122

Query: 125 LVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCEFREN 184
           L V            P+  P++   +  YACQR T L + N   ++A +ILAE   F  +
Sbjct: 123 LEV----------AGPRKGPLSPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGS 172

Query: 185 EDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDE 244
           E   +TF RAASVLK+LP  + ++   +G+P  G     +++E++E G   EV+ V   E
Sbjct: 173 EGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVVQELLEHGVCEEVERVRRSE 232

Query: 245 RYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVT 304
           RYQ+ KLFT +FGVG+KT+++W+R G RTL  +R ++  K T+ QKAG  +++DL + V 
Sbjct: 233 RYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLR-EQPQKLTQQQKAGLQHHQDLSTPVL 291

Query: 305 RAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKV 364
           R++ +A+  +V+EAV   LP A VT+TGGFRRGK  GHDVDFLIT P   + E  LL +V
Sbjct: 292 RSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQ-EAGLLPRV 350

Query: 365 MNLWEKKGLLLYYDLVESTFEKLRLPSR--KVDALDHFQKCFLIFKLPRQRVDSDQSSWQ 422
           M   + +GL+LY+    S  E    P+R  +   +D F++ F IF+LP+    +   S +
Sbjct: 351 MCRLQDQGLILYHQHQHSCCES---PTRLAQQSHMDAFERSFCIFRLPQPPGAAVGGSTR 407

Query: 423 EGKTWKAIRVDLVLCPYERRAFALLGWTGSR-FERDLRRYATHERKMILDNHALYDKTKR 481
              +WKA+RVDLV+ P  +  FALLGWTGS+ F+R+LRR++  E+ + L++H L+D  ++
Sbjct: 408 PCPSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRFSRKEKGLWLNSHGLFDPEQK 467

Query: 482 IFLKAESEEEIFAHLGLDYIEPWERNA 508
            F +A SEE+IF HLGL+Y+ P +RNA
Sbjct: 468 TFFQAASEEDIFRHLGLEYLPPEQRNA 494


>gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens]
          Length = 575

 Score =  120 bits (301), Expect = 3e-27
 Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 48/381 (12%)

Query: 140 PKTPPIAVQK--ISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASV 197
           P   P  + K   +Q + Q+ T   N N   T+  ++LA+    + ++   + + +A + 
Sbjct: 229 PSPAPAVLDKWVCAQPSSQKAT---NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINA 285

Query: 198 LKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFG 257
           LKS    + S ++   IP +G ++   I EI+E G   ++  +   E     +LF++++G
Sbjct: 286 LKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI--SESVPVLELFSNIWG 343

Query: 258 VGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKE 317
            G KT++ W++ GFR+L  +RS  SL  T  Q  G  +Y D +  + R EA  +   V++
Sbjct: 344 AGTKTAQMWYQQGFRSLEDIRSQASL--TTQQAIGLKHYSDFLERMPREEATEIEQTVQK 401

Query: 318 AVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKVMNLWEKKGLLLYY 377
           A  AF         G +RRGK    DVD LIT P        +  ++++   ++G L   
Sbjct: 402 AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDG-RSHRGIFSRLLDSLRQEGFLT-D 459

Query: 378 DLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSSWQEGKTWKAIRVDLVLC 437
           DLV              +     QK   + +LP             G   +  R+D+++ 
Sbjct: 460 DLVSQ------------EENGQQQKYLGVCRLP-------------GPGRRHRRLDIIVV 494

Query: 438 PYERRAFALLGWTGS-RFERDLRRYATHERKMILDNHALYDKTKR----------IFLKA 486
           PY   A ALL +TGS  F R +R  A   + M L  HAL     R            L  
Sbjct: 495 PYSEFACALLYFTGSAHFNRSMRALA-KTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPT 553

Query: 487 ESEEEIFAHLGLDYIEPWERN 507
            +E+++F  LGL Y EP ER+
Sbjct: 554 PTEKDVFRLLGLPYREPAERD 574


>gi|4505931 DNA-directed DNA polymerase beta [Homo sapiens]
          Length = 335

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 37/345 (10%)

Query: 173 DILAENCEFRENEDSCV----TFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEI 228
           D+L E   F +N    +     + +AASV+   P  I S  + + +P +G+K+   I+E 
Sbjct: 17  DMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEF 76

Query: 229 IEDGESSEVKAVLNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRM 288
           +  G+  +++ +  D+   S    T V G+G   + K+   G +TL  +R ++  K    
Sbjct: 77  LATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNED-KLNHH 135

Query: 289 QKAGFLYYEDLVSCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLI 348
           Q+ G  Y+ D    + R E   +  +V   V     +   T+ G FRRG +   D+D L+
Sbjct: 136 QRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLL 195

Query: 349 TSPGSTEDEEQLLQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFL-IF 407
           T P  T +  +  +                L+    E+L+      D L   +  F+ + 
Sbjct: 196 THPSFTSESTKQPK----------------LLHQVVEQLQKVHFITDTLSKGETKFMGVC 239

Query: 408 KLPRQRVDSDQSSWQEGKTWKAIRVDLVLCPYERRAFALLGWTGSR-FERDLRRYATHER 466
           +LP         S  + K +   R+D+ L P ++    +L +TGS  F +++R +A  E+
Sbjct: 240 QLP---------SKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHAL-EK 289

Query: 467 KMILDNHAL----YDKTKRIFLKAESEEEIFAHLGLDYIEPWERN 507
              ++ + +            L  +SE++IF ++   Y EP +R+
Sbjct: 290 GFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRS 334


>gi|7706645 protein phosphatase methylesterase 1 [Homo sapiens]
          Length = 386

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 22/148 (14%)

Query: 208 MKDTEGIPCL-GSK--VKGIIEEIIEDGESSE-VKAVLNDERYQSFKLFTSVFGVGLKTS 263
           +K  EGI    GSK  V+GIIEE  ED E SE +     ++  ++ K     + + L  +
Sbjct: 235 VKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKT 294

Query: 264 EKWFRMGFRTLSKV----------------RSDKSLKFTRMQKAGFLYYEDLVSCVTRAE 307
           EK++   FR LS +                R DK L   +MQ  G    + L  C     
Sbjct: 295 EKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQ--GKFQMQVLPQCGHAVH 352

Query: 308 AEAVSVLVKEAVWAFLPDAFVTMTGGFR 335
            +A   + +      +   F    GGF+
Sbjct: 353 EDAPDKVAEAVATFLIRHRFAEPIGGFQ 380


>gi|214831834 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363
           V + +W   L   +VT+TG   RGKK G  VD  +T    TE E Q L K
Sbjct: 88  VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134


>gi|19923913 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363
           V + +W   L   +VT+TG   RGKK G  VD  +T    TE E Q L K
Sbjct: 88  VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134


>gi|214831799 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363
           V + +W   L   +VT+TG   RGKK G  VD  +T    TE E Q L K
Sbjct: 88  VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134


>gi|214831780 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363
           V + +W   L   +VT+TG   RGKK G  VD  +T    TE E Q L K
Sbjct: 88  VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134


>gi|239757716 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 477

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 117 VEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIF 168
           ++  GK+ L+VRR+ + ST    P   P     IS+  C  +   +N NQ++
Sbjct: 348 LQQHGKNVLIVRREKTTST----PDCTPTYTDVISETLCSMKKRKDNLNQLY 395


>gi|239752203 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 477

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 117 VEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIF 168
           ++  GK+ L+VRR+ + ST    P   P     IS+  C  +   +N NQ++
Sbjct: 348 LQQHGKNVLIVRREKTTST----PDCTPTYTDVISETLCSMKKRKDNLNQLY 395


>gi|239746726 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 477

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 117 VEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIF 168
           ++  GK+ L+VRR+ + ST    P   P     IS+  C  +   +N NQ++
Sbjct: 348 LQQHGKNVLIVRREKTTST----PDCTPTYTDVISETLCSMKKRKDNLNQLY 395


>gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo
           sapiens]
          Length = 626

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 64  ENELSDSVTHIVAENNSG-SDVLEWLQA---QKVQVSSQPELLDVSWLIECIRAGKPVEM 119
           EN L +      AE  S  S  ++W+ +    ++Q  +  +  +V  L+    A K  E 
Sbjct: 114 ENALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQED 173

Query: 120 TGKHQLVVRRDYSDSTNPGPPKTPP 144
            G+ +L    +YS    P PP  PP
Sbjct: 174 KGRKELEKSLEYSTVPTPLPPVPPP 198


>gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo
           sapiens]
          Length = 626

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 64  ENELSDSVTHIVAENNSG-SDVLEWLQA---QKVQVSSQPELLDVSWLIECIRAGKPVEM 119
           EN L +      AE  S  S  ++W+ +    ++Q  +  +  +V  L+    A K  E 
Sbjct: 114 ENALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQED 173

Query: 120 TGKHQLVVRRDYSDSTNPGPPKTPP 144
            G+ +L    +YS    P PP  PP
Sbjct: 174 KGRKELEKSLEYSTVPTPLPPVPPP 198


>gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Homo
           sapiens]
          Length = 626

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 64  ENELSDSVTHIVAENNSG-SDVLEWLQA---QKVQVSSQPELLDVSWLIECIRAGKPVEM 119
           EN L +      AE  S  S  ++W+ +    ++Q  +  +  +V  L+    A K  E 
Sbjct: 114 ENALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQED 173

Query: 120 TGKHQLVVRRDYSDSTNPGPPKTPP 144
            G+ +L    +YS    P PP  PP
Sbjct: 174 KGRKELEKSLEYSTVPTPLPPVPPP 198


>gi|145553976 zinc finger, CW type with coiled-coil domain 2 isoform
           a [Homo sapiens]
          Length = 937

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 57  RRKGFRVENELSDSVTHIVA-ENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGK 115
           +R+G  +  EL D +  +VA E+N GS  +      K +V+  P +  V        +G 
Sbjct: 652 QRQGSLLPEELEDQMPRLVAEESNRGSTTI-----NKEEVNKGPFVAVVGVAKGVRDSGA 706

Query: 116 PVEMT--GKHQLVVRRDYSDSTNPGPPKTPPIAV 147
           P+++    + +L  RR   +S NP P      A+
Sbjct: 707 PIQLIPFNREELAERRKAVESWNPVPYSVASAAI 740


>gi|145553971 zinc finger, CW type with coiled-coil domain 2 isoform
           b [Homo sapiens]
          Length = 900

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 57  RRKGFRVENELSDSVTHIVA-ENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGK 115
           +R+G  +  EL D +  +VA E+N GS  +      K +V+  P +  V        +G 
Sbjct: 652 QRQGSLLPEELEDQMPRLVAEESNRGSTTI-----NKEEVNKGPFVAVVGVAKGVRDSGA 706

Query: 116 PVEMT--GKHQLVVRRDYSDSTNPGPPKTPPIAV 147
           P+++    + +L  RR   +S NP P      A+
Sbjct: 707 PIQLIPFNREELAERRKAVESWNPVPYSVASAAI 740


>gi|169202726 PREDICTED: similar to ring finger protein 18 isoform 1
           [Homo sapiens]
          Length = 452

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%)

Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353
           S+  K ++W FL      M G  R  KKM  +VD      L +S               +
Sbjct: 75  SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133

Query: 354 TEDEEQLLQKVMNLWEK 370
            E +E+LLQK+ +LWEK
Sbjct: 134 EEHQEKLLQKMQSLWEK 150


>gi|239755488 PREDICTED: similar to ring finger protein 18 isoform 2
           [Homo sapiens]
          Length = 446

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%)

Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353
           S+  K ++W FL      M G  R  KKM  +VD      L +S               +
Sbjct: 75  SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133

Query: 354 TEDEEQLLQKVMNLWEK 370
            E +E+LLQK+ +LWEK
Sbjct: 134 EEHQEKLLQKMQSLWEK 150


>gi|169203362 PREDICTED: similar to ring finger protein 18 [Homo
           sapiens]
          Length = 452

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%)

Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353
           S+  K ++W FL      M G  R  KKM  +VD      L +S               +
Sbjct: 75  SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133

Query: 354 TEDEEQLLQKVMNLWEK 370
            E +E+LLQK+ +LWEK
Sbjct: 134 EEHQEKLLQKMQSLWEK 150


>gi|27484954 PREDICTED: similar to ring finger protein 18 [Homo
           sapiens]
          Length = 452

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%)

Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353
           S+  K ++W FL      M G  R  KKM  +VD      L +S               +
Sbjct: 75  SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133

Query: 354 TEDEEQLLQKVMNLWEK 370
            E +E+LLQK+ +LWEK
Sbjct: 134 EEHQEKLLQKMQSLWEK 150


>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
          Length = 1460

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 39   ILEKKMGTTRRAF--LMELARRKGFRVEN---------ELSDSVTHIVAENNSGSDVLEW 87
            +LE +  T RR    L+++ R+   + E          E     TH++  N    ++L+ 
Sbjct: 944  LLEVQEETARREKQQLLDVQRQVALKSEEATATHQQLEEAQKEHTHLLQSNQQLREILDE 1003

Query: 88   LQAQKVQVSSQPELL 102
            LQA+K+++ SQ +LL
Sbjct: 1004 LQARKLKLESQVDLL 1018


>gi|31377566 ring finger protein 168 [Homo sapiens]
          Length = 571

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 183 ENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEV 237
           ENE+SC+   +  S  K+   +  ++KD    PC  +K + +  E   D E +E+
Sbjct: 373 ENEESCLLISKEISKRKNQESSFEAVKD----PCFSAKRRKVSPESSPDQEETEI 423


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,212,735
Number of Sequences: 37866
Number of extensions: 823327
Number of successful extensions: 2057
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2039
Number of HSP's gapped (non-prelim): 26
length of query: 508
length of database: 18,247,518
effective HSP length: 107
effective length of query: 401
effective length of database: 14,195,856
effective search space: 5692538256
effective search space used: 5692538256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.