BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|62955803 nucleoporin 188kDa [Homo sapiens] (1749 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|62955803 nucleoporin 188kDa [Homo sapiens] 3468 0.0 gi|120587023 down-regulated in metastasis [Homo sapiens] 34 1.1 gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 34 1.1 gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 34 1.4 gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 4.2 gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 32 4.2 gi|21328446 hormone-sensitive lipase [Homo sapiens] 32 5.4 gi|126116565 MYC binding protein 2 [Homo sapiens] 32 7.1 gi|45269137 mitofusin 1 [Homo sapiens] 32 7.1 gi|62865621 toll-like receptor 10 precursor [Homo sapiens] 31 9.3 gi|62865618 toll-like receptor 10 precursor [Homo sapiens] 31 9.3 gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 31 9.3 gi|11068137 hydroxyacid oxidase 1 [Homo sapiens] 31 9.3 gi|31543159 hypothetical protein LOC57020 [Homo sapiens] 31 9.3 >gi|62955803 nucleoporin 188kDa [Homo sapiens] Length = 1749 Score = 3468 bits (8992), Expect = 0.0 Identities = 1749/1749 (100%), Positives = 1749/1749 (100%) Query: 1 MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK 60 MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK Sbjct: 1 MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK 60 Query: 61 VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQA 120 VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQA Sbjct: 61 VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQA 120 Query: 121 LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL 180 LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL Sbjct: 121 LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL 180 Query: 181 YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK 240 YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK Sbjct: 181 YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK 240 Query: 241 EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG 300 EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG Sbjct: 241 EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG 300 Query: 301 LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR 360 LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR Sbjct: 301 LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR 360 Query: 361 LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF 420 LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF Sbjct: 361 LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF 420 Query: 421 WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH 480 WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH Sbjct: 421 WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH 480 Query: 481 KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT 540 KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT Sbjct: 481 KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT 540 Query: 541 LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL 600 LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL Sbjct: 541 LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL 600 Query: 601 TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA 660 TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA Sbjct: 601 TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA 660 Query: 661 GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK 720 GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK Sbjct: 661 GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK 720 Query: 721 WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQFLCICSLAYTEAGQTVINI 780 WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQFLCICSLAYTEAGQTVINI Sbjct: 721 WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQFLCICSLAYTEAGQTVINI 780 Query: 781 MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA 840 MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA Sbjct: 781 MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA 840 Query: 841 LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA 900 LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA Sbjct: 841 LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA 900 Query: 901 FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLH 960 FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLH Sbjct: 901 FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLH 960 Query: 961 AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT 1020 AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT Sbjct: 961 AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT 1020 Query: 1021 LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK 1080 LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK Sbjct: 1021 LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK 1080 Query: 1081 SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT 1140 SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT Sbjct: 1081 SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT 1140 Query: 1141 KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME 1200 KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME Sbjct: 1141 KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME 1200 Query: 1201 KTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE 1260 KTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE Sbjct: 1201 KTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE 1260 Query: 1261 DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL 1320 DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL Sbjct: 1261 DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL 1320 Query: 1321 EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT 1380 EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT Sbjct: 1321 EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT 1380 Query: 1381 PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV 1440 PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV Sbjct: 1381 PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV 1440 Query: 1441 QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH 1500 QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH Sbjct: 1441 QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH 1500 Query: 1501 YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSK 1560 YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSK Sbjct: 1501 YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSK 1560 Query: 1561 TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM 1620 TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM Sbjct: 1561 TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM 1620 Query: 1621 LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK 1680 LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK Sbjct: 1621 LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK 1680 Query: 1681 QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV 1740 QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV Sbjct: 1681 QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV 1740 Query: 1741 QAFVRHMQR 1749 QAFVRHMQR Sbjct: 1741 QAFVRHMQR 1749 >gi|120587023 down-regulated in metastasis [Homo sapiens] Length = 2785 Score = 34.3 bits (77), Expect = 1.1 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 50 YKPPSPSSAEKVKANKDVASPLKELGL--RISKFLGLDEEQSVQLLQCYLQEDYRG 103 Y + SAEKVK K+ A KELG+ +ISKF+ D+EQS L+ L +RG Sbjct: 1309 YLSKTTISAEKVKKKKNRAQVSKELGILSKISKFM-KDKEQSSVLITLLLPFLHRG 1363 >gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name family member (tag-184) [Homo sapiens] Length = 2785 Score = 34.3 bits (77), Expect = 1.1 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 50 YKPPSPSSAEKVKANKDVASPLKELGL--RISKFLGLDEEQSVQLLQCYLQEDYRG 103 Y + SAEKVK K+ A KELG+ +ISKF+ D+EQS L+ L +RG Sbjct: 1309 YLSKTTISAEKVKKKKNRAQVSKELGILSKISKFM-KDKEQSSVLITLLLPFLHRG 1363 >gi|122891870 melanoma inhibitory activity family, member 3 [Homo sapiens] Length = 1907 Score = 33.9 bits (76), Expect = 1.4 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%) Query: 71 LKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQALILKIADYYY 130 L +L LR S + E V+ L ED R + + K L+DE ++ ++I + Y Sbjct: 1473 LLQLKLRASVSTKCNLEDQVKKL-----EDDRNSLQAAKAGLEDECKTLRQKVEILNELY 1527 Query: 131 EERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL---------- 180 +++ L+ L Y + ER +R+ AD E V Y+++ EE+ Sbjct: 1528 QQKEMALQKKLSQEEYERQERE-HRLSAADEKAVSAAEEVKTYKRRIEEMEDELQKTERS 1586 Query: 181 YKTEAPTWE--THGNLMTERQVSRWFVQCLREQSML 214 +K + T E H N + R R + RE + L Sbjct: 1587 FKNQIATHEKKAHENWLKARAAERAIAEEKREAANL 1622 >gi|237858621 polyamine modulated factor 1 binding protein 1 isoform b [Homo sapiens] Length = 882 Score = 32.3 bits (72), Expect = 4.2 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 31/246 (12%) Query: 1079 VKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTH-----ADIMHLTDSV--VRRQ 1131 +K + H+ E + S C + EYQ LV R+ L + D+M L + +R + Sbjct: 159 IKKILKHLQEQKDSQCLHVEEYQNLVKDLRVELEAVSEQKRNIMKDMMKLELDLHGLREE 218 Query: 1132 LFLDVLDGTKALLLVPASVNCLRL---GSMKCTLLLILLRQWKRELGSVDEILGPLTEIL 1188 + K + ++ + L+L + K TL Q K E+ + E+ LT++ Sbjct: 219 TSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEM--LQELEKKLTQVQ 276 Query: 1189 EGVLQADQQLMEKTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFD- 1247 +L+ +++L EK + +TV + K+ K + C+ LQ EV L + Sbjct: 277 NSLLKKEKEL-EKQQCMATELEMTVKEAKQDKSKEAE---------CKALQAEVQKLKNS 326 Query: 1248 ----QTRHSLALGSATEDKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSW 1303 + + LA A + K+ C H + GL L K+ + ++ Sbjct: 327 LEEAKQQERLAAQQAAQCKEEAALAGC----HLEDTQRKLQKGLLLDKQKADTIQELQRE 382 Query: 1304 LQVTRR 1309 LQ+ ++ Sbjct: 383 LQMLQK 388 >gi|237858619 polyamine modulated factor 1 binding protein 1 isoform a [Homo sapiens] Length = 1007 Score = 32.3 bits (72), Expect = 4.2 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 31/246 (12%) Query: 1079 VKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTH-----ADIMHLTDSV--VRRQ 1131 +K + H+ E + S C + EYQ LV R+ L + D+M L + +R + Sbjct: 304 IKKILKHLQEQKDSQCLHVEEYQNLVKDLRVELEAVSEQKRNIMKDMMKLELDLHGLREE 363 Query: 1132 LFLDVLDGTKALLLVPASVNCLRL---GSMKCTLLLILLRQWKRELGSVDEILGPLTEIL 1188 + K + ++ + L+L + K TL Q K E+ + E+ LT++ Sbjct: 364 TSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEM--LQELEKKLTQVQ 421 Query: 1189 EGVLQADQQLMEKTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFD- 1247 +L+ +++L EK + +TV + K+ K + C+ LQ EV L + Sbjct: 422 NSLLKKEKEL-EKQQCMATELEMTVKEAKQDKSKEAE---------CKALQAEVQKLKNS 471 Query: 1248 ----QTRHSLALGSATEDKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSW 1303 + + LA A + K+ C H + GL L K+ + ++ Sbjct: 472 LEEAKQQERLAAQQAAQCKEEAALAGC----HLEDTQRKLQKGLLLDKQKADTIQELQRE 527 Query: 1304 LQVTRR 1309 LQ+ ++ Sbjct: 528 LQMLQK 533 >gi|21328446 hormone-sensitive lipase [Homo sapiens] Length = 1076 Score = 32.0 bits (71), Expect = 5.4 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 1499 QHYLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQ 1545 +H Q G G P Q + P AA A P + ++P+A TE++ Q+ Sbjct: 134 RHVAQPGPGPGEPPPAQQEAESTP-AAQAKPGAKREPSAPTESTSQE 179 >gi|126116565 MYC binding protein 2 [Homo sapiens] Length = 4640 Score = 31.6 bits (70), Expect = 7.1 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Query: 737 LELIHAILNLCHETDLHSSH----TPSLQFLCICSL 768 L L+ A+L CH T H TP+LQ+ C+C L Sbjct: 1494 LSLLEAVLQECHNTFTACFHSFYPTPALQWACLCDL 1529 >gi|45269137 mitofusin 1 [Homo sapiens] Length = 741 Score = 31.6 bits (70), Expect = 7.1 Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Query: 1467 HFHLPQLMRDIQVNLGY--LCQACTSLLHSR------KMLQHYLQNKNGDGLPSAVAQRV 1518 H +P D+ NL Y LC + R ++ +L +N + +++ + Sbjct: 493 HTLIPCKKFDLSYNLNYHKLCSDFQEDIVFRFSLGWSSLVHRFLGPRNAQRVLLGLSEPI 552 Query: 1519 QRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSKT 1561 + P + ++ P++ PA AS+++ + T+ GL + S+T Sbjct: 553 FQLPRSLASTPTAPTTPATPDNASQEELMITLVTGLASVTSRT 595 >gi|62865621 toll-like receptor 10 precursor [Homo sapiens] Length = 811 Score = 31.2 bits (69), Expect = 9.3 Identities = 14/45 (31%), Positives = 26/45 (57%) Query: 591 SRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRH 635 SR+ +L + ++SP +D + SC T+ A RNP + +L++ Sbjct: 488 SRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKN 532 >gi|62865618 toll-like receptor 10 precursor [Homo sapiens] Length = 811 Score = 31.2 bits (69), Expect = 9.3 Identities = 14/45 (31%), Positives = 26/45 (57%) Query: 591 SRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRH 635 SR+ +L + ++SP +D + SC T+ A RNP + +L++ Sbjct: 488 SRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKN 532 >gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] Length = 1217 Score = 31.2 bits (69), Expect = 9.3 Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 17/180 (9%) Query: 23 RSALRELSQIEAELNKHWRRLLE-------GLSYYKPPSPSSAEKVKANKD-VASPLKEL 74 R A EL ++EA+LN++ RR +E L + K KA++D + S +K L Sbjct: 683 RKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKML 742 Query: 75 --GLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQALILKIADYYYEE 132 + S+ + +++S+Q L+ L TR+S+K L + SQ L + D ++ Sbjct: 743 KEKRQQSEKTFMPKQRSLQSLEASLHA-MESTRESLKAELGTDLLSQ---LSLED---QK 795 Query: 133 RTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEELYKTEAPTWETHG 192 R L + L + R++ + ++E L R++ +++ + ET G Sbjct: 796 RVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEG 855 >gi|11068137 hydroxyacid oxidase 1 [Homo sapiens] Length = 370 Score = 31.2 bits (69), Expect = 9.3 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 855 LAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAA-AIRDAFLTRLQSKIEDMR 913 LA Y+ DP++ I+ L+RL ++ ++ G+DA A++ L S + Sbjct: 205 LAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQ 264 Query: 914 IKVM--ILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLG 954 + + ++ L VE G +E+FL+ V+ G+D K +LG Sbjct: 265 LDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALG 307 >gi|31543159 hypothetical protein LOC57020 [Homo sapiens] Length = 963 Score = 31.2 bits (69), Expect = 9.3 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Query: 121 LILKIADYYYE----ERTCILRCVLHLLTYFQDERHPYRVEYADCVDKL 165 L+ I DY +E E+ I CVLHLL+ E + Y ++ D D L Sbjct: 801 LLNVIQDYTWEDNSDEKIRIYTCVLHLLSAMSQETYLYHIDKVDSNDSL 849 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,638,306 Number of Sequences: 37866 Number of extensions: 2768550 Number of successful extensions: 8904 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 8892 Number of HSP's gapped (non-prelim): 23 length of query: 1749 length of database: 18,247,518 effective HSP length: 116 effective length of query: 1633 effective length of database: 13,855,062 effective search space: 22625316246 effective search space used: 22625316246 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.