Search of human proteins with 62955803

Search of human proteins with 62955803

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|62955803 nucleoporin 188kDa [Homo sapiens]
         (1749 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|62955803 nucleoporin 188kDa [Homo sapiens]                        3468   0.0  
gi|120587023 down-regulated in metastasis [Homo sapiens]               34   1.1  
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name...    34   1.1  
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    34   1.4  
gi|237858621 polyamine modulated factor 1 binding protein 1 isof...    32   4.2  
gi|237858619 polyamine modulated factor 1 binding protein 1 isof...    32   4.2  
gi|21328446 hormone-sensitive lipase [Homo sapiens]                    32   5.4  
gi|126116565 MYC binding protein 2 [Homo sapiens]                      32   7.1  
gi|45269137 mitofusin 1 [Homo sapiens]                                 32   7.1  
gi|62865621 toll-like receptor 10 precursor [Homo sapiens]             31   9.3  
gi|62865618 toll-like receptor 10 precursor [Homo sapiens]             31   9.3  
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]      31   9.3  
gi|11068137 hydroxyacid oxidase 1 [Homo sapiens]                       31   9.3  
gi|31543159 hypothetical protein LOC57020 [Homo sapiens]               31   9.3  

>gi|62955803 nucleoporin 188kDa [Homo sapiens]
          Length = 1749

 Score = 3468 bits (8992), Expect = 0.0
 Identities = 1749/1749 (100%), Positives = 1749/1749 (100%)

Query: 1    MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK 60
            MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK
Sbjct: 1    MAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEGLSYYKPPSPSSAEK 60

Query: 61   VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQA 120
            VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQA
Sbjct: 61   VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQA 120

Query: 121  LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL 180
            LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL
Sbjct: 121  LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL 180

Query: 181  YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK 240
            YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
Sbjct: 181  YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK 240

Query: 241  EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG 300
            EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
Sbjct: 241  EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG 300

Query: 301  LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR 360
            LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
Sbjct: 301  LICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR 360

Query: 361  LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF 420
            LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF
Sbjct: 361  LLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF 420

Query: 421  WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH 480
            WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
Sbjct: 421  WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH 480

Query: 481  KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT 540
            KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
Sbjct: 481  KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT 540

Query: 541  LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL 600
            LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
Sbjct: 541  LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL 600

Query: 601  TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA 660
            TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA
Sbjct: 601  TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSSLSQMISAEGMNA 660

Query: 661  GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK 720
            GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
Sbjct: 661  GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK 720

Query: 721  WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQFLCICSLAYTEAGQTVINI 780
            WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQFLCICSLAYTEAGQTVINI
Sbjct: 721  WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQFLCICSLAYTEAGQTVINI 780

Query: 781  MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA 840
            MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
Sbjct: 781  MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA 840

Query: 841  LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA 900
            LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
Sbjct: 841  LSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA 900

Query: 901  FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLH 960
            FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLH
Sbjct: 901  FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGMWSCLH 960

Query: 961  AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT 1020
            AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
Sbjct: 961  AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT 1020

Query: 1021 LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK 1080
            LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK
Sbjct: 1021 LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSIEKRFAYWSGYVK 1080

Query: 1081 SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT 1140
            SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT
Sbjct: 1081 SLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDSVVRRQLFLDVLDGT 1140

Query: 1141 KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME 1200
            KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME
Sbjct: 1141 KALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME 1200

Query: 1201 KTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE 1260
            KTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE
Sbjct: 1201 KTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLALGSATE 1260

Query: 1261 DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL 1320
            DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
Sbjct: 1261 DKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL 1320

Query: 1321 EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT 1380
            EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT
Sbjct: 1321 EVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTAQT 1380

Query: 1381 PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV 1440
            PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV
Sbjct: 1381 PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV 1440

Query: 1441 QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH 1500
            QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH
Sbjct: 1441 QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQACTSLLHSRKMLQH 1500

Query: 1501 YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSK 1560
            YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSK
Sbjct: 1501 YLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSK 1560

Query: 1561 TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM 1620
            TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM
Sbjct: 1561 TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM 1620

Query: 1621 LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK 1680
            LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK
Sbjct: 1621 LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDK 1680

Query: 1681 QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV 1740
            QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV
Sbjct: 1681 QRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLSKASPESQEPLIQLV 1740

Query: 1741 QAFVRHMQR 1749
            QAFVRHMQR
Sbjct: 1741 QAFVRHMQR 1749


>gi|120587023 down-regulated in metastasis [Homo sapiens]
          Length = 2785

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 50   YKPPSPSSAEKVKANKDVASPLKELGL--RISKFLGLDEEQSVQLLQCYLQEDYRG 103
            Y   +  SAEKVK  K+ A   KELG+  +ISKF+  D+EQS  L+   L   +RG
Sbjct: 1309 YLSKTTISAEKVKKKKNRAQVSKELGILSKISKFM-KDKEQSSVLITLLLPFLHRG 1363


>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
            family member (tag-184) [Homo sapiens]
          Length = 2785

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 50   YKPPSPSSAEKVKANKDVASPLKELGL--RISKFLGLDEEQSVQLLQCYLQEDYRG 103
            Y   +  SAEKVK  K+ A   KELG+  +ISKF+  D+EQS  L+   L   +RG
Sbjct: 1309 YLSKTTISAEKVKKKKNRAQVSKELGILSKISKFM-KDKEQSSVLITLLLPFLHRG 1363


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
            sapiens]
          Length = 1907

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 71   LKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQALILKIADYYY 130
            L +L LR S     + E  V+ L     ED R +  + K  L+DE ++    ++I +  Y
Sbjct: 1473 LLQLKLRASVSTKCNLEDQVKKL-----EDDRNSLQAAKAGLEDECKTLRQKVEILNELY 1527

Query: 131  EERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEEL---------- 180
            +++   L+  L    Y + ER  +R+  AD       E V  Y+++ EE+          
Sbjct: 1528 QQKEMALQKKLSQEEYERQERE-HRLSAADEKAVSAAEEVKTYKRRIEEMEDELQKTERS 1586

Query: 181  YKTEAPTWE--THGNLMTERQVSRWFVQCLREQSML 214
            +K +  T E   H N +  R   R   +  RE + L
Sbjct: 1587 FKNQIATHEKKAHENWLKARAAERAIAEEKREAANL 1622


>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform b
            [Homo sapiens]
          Length = 882

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 31/246 (12%)

Query: 1079 VKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTH-----ADIMHLTDSV--VRRQ 1131
            +K +  H+ E + S C  + EYQ LV   R+ L   +        D+M L   +  +R +
Sbjct: 159  IKKILKHLQEQKDSQCLHVEEYQNLVKDLRVELEAVSEQKRNIMKDMMKLELDLHGLREE 218

Query: 1132 LFLDVLDGTKALLLVPASVNCLRL---GSMKCTLLLILLRQWKRELGSVDEILGPLTEIL 1188
                +    K + ++   +  L+L    + K TL      Q K E+  + E+   LT++ 
Sbjct: 219  TSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEM--LQELEKKLTQVQ 276

Query: 1189 EGVLQADQQLMEKTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFD- 1247
              +L+ +++L EK +       +TV + K+ K  +           C+ LQ EV  L + 
Sbjct: 277  NSLLKKEKEL-EKQQCMATELEMTVKEAKQDKSKEAE---------CKALQAEVQKLKNS 326

Query: 1248 ----QTRHSLALGSATEDKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSW 1303
                + +  LA   A + K+      C    H +        GL L K+  +  ++    
Sbjct: 327  LEEAKQQERLAAQQAAQCKEEAALAGC----HLEDTQRKLQKGLLLDKQKADTIQELQRE 382

Query: 1304 LQVTRR 1309
            LQ+ ++
Sbjct: 383  LQMLQK 388


>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform a
            [Homo sapiens]
          Length = 1007

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 31/246 (12%)

Query: 1079 VKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTH-----ADIMHLTDSV--VRRQ 1131
            +K +  H+ E + S C  + EYQ LV   R+ L   +        D+M L   +  +R +
Sbjct: 304  IKKILKHLQEQKDSQCLHVEEYQNLVKDLRVELEAVSEQKRNIMKDMMKLELDLHGLREE 363

Query: 1132 LFLDVLDGTKALLLVPASVNCLRL---GSMKCTLLLILLRQWKRELGSVDEILGPLTEIL 1188
                +    K + ++   +  L+L    + K TL      Q K E+  + E+   LT++ 
Sbjct: 364  TSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEM--LQELEKKLTQVQ 421

Query: 1189 EGVLQADQQLMEKTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALFD- 1247
              +L+ +++L EK +       +TV + K+ K  +           C+ LQ EV  L + 
Sbjct: 422  NSLLKKEKEL-EKQQCMATELEMTVKEAKQDKSKEAE---------CKALQAEVQKLKNS 471

Query: 1248 ----QTRHSLALGSATEDKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSW 1303
                + +  LA   A + K+      C    H +        GL L K+  +  ++    
Sbjct: 472  LEEAKQQERLAAQQAAQCKEEAALAGC----HLEDTQRKLQKGLLLDKQKADTIQELQRE 527

Query: 1304 LQVTRR 1309
            LQ+ ++
Sbjct: 528  LQMLQK 533


>gi|21328446 hormone-sensitive lipase [Homo sapiens]
          Length = 1076

 Score = 32.0 bits (71), Expect = 5.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 1499 QHYLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQQ 1545
            +H  Q   G G P    Q  +  P AA A P + ++P+A TE++ Q+
Sbjct: 134  RHVAQPGPGPGEPPPAQQEAESTP-AAQAKPGAKREPSAPTESTSQE 179


>gi|126116565 MYC binding protein 2 [Homo sapiens]
          Length = 4640

 Score = 31.6 bits (70), Expect = 7.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%)

Query: 737  LELIHAILNLCHETDLHSSH----TPSLQFLCICSL 768
            L L+ A+L  CH T     H    TP+LQ+ C+C L
Sbjct: 1494 LSLLEAVLQECHNTFTACFHSFYPTPALQWACLCDL 1529


>gi|45269137 mitofusin 1 [Homo sapiens]
          Length = 741

 Score = 31.6 bits (70), Expect = 7.1
 Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 1467 HFHLPQLMRDIQVNLGY--LCQACTSLLHSR------KMLQHYLQNKNGDGLPSAVAQRV 1518
            H  +P    D+  NL Y  LC      +  R       ++  +L  +N   +   +++ +
Sbjct: 493  HTLIPCKKFDLSYNLNYHKLCSDFQEDIVFRFSLGWSSLVHRFLGPRNAQRVLLGLSEPI 552

Query: 1519 QRPPSAASAAPSSSKQPAADTEASEQQALHTVQYGLLKILSKT 1561
             + P + ++ P++   PA    AS+++ + T+  GL  + S+T
Sbjct: 553  FQLPRSLASTPTAPTTPATPDNASQEELMITLVTGLASVTSRT 595


>gi|62865621 toll-like receptor 10 precursor [Homo sapiens]
          Length = 811

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 14/45 (31%), Positives = 26/45 (57%)

Query: 591 SRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRH 635
           SR+ +L   +  ++SP +D + SC    T+ A RNP +   +L++
Sbjct: 488 SRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKN 532


>gi|62865618 toll-like receptor 10 precursor [Homo sapiens]
          Length = 811

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 14/45 (31%), Positives = 26/45 (57%)

Query: 591 SRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRH 635
           SR+ +L   +  ++SP +D + SC    T+ A RNP +   +L++
Sbjct: 488 SRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKN 532


>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
          Length = 1217

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 17/180 (9%)

Query: 23  RSALRELSQIEAELNKHWRRLLE-------GLSYYKPPSPSSAEKVKANKD-VASPLKEL 74
           R A  EL ++EA+LN++ RR +E        L        +   K KA++D + S +K L
Sbjct: 683 RKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKML 742

Query: 75  --GLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSVKTVLQDERQSQALILKIADYYYEE 132
               + S+   + +++S+Q L+  L      TR+S+K  L  +  SQ   L + D   ++
Sbjct: 743 KEKRQQSEKTFMPKQRSLQSLEASLHA-MESTRESLKAELGTDLLSQ---LSLED---QK 795

Query: 133 RTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVSKYRQQFEELYKTEAPTWETHG 192
           R   L   +  L     +    R++    + ++E  L    R++ +++ +      ET G
Sbjct: 796 RVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEG 855


>gi|11068137 hydroxyacid oxidase 1 [Homo sapiens]
          Length = 370

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 855 LAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAA-AIRDAFLTRLQSKIEDMR 913
           LA Y+    DP++    I+ L+RL ++  ++     G+DA  A++      L S     +
Sbjct: 205 LAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQ 264

Query: 914 IKVM--ILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLG 954
           +  +   ++ L   VE   G +E+FL+  V+ G+D  K  +LG
Sbjct: 265 LDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALG 307


>gi|31543159 hypothetical protein LOC57020 [Homo sapiens]
          Length = 963

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 121 LILKIADYYYE----ERTCILRCVLHLLTYFQDERHPYRVEYADCVDKL 165
           L+  I DY +E    E+  I  CVLHLL+    E + Y ++  D  D L
Sbjct: 801 LLNVIQDYTWEDNSDEKIRIYTCVLHLLSAMSQETYLYHIDKVDSNDSL 849


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,638,306
Number of Sequences: 37866
Number of extensions: 2768550
Number of successful extensions: 8904
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 8892
Number of HSP's gapped (non-prelim): 23
length of query: 1749
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1633
effective length of database: 13,855,062
effective search space: 22625316246
effective search space used: 22625316246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.