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Search of human proteins with 62912492
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform b [Homo sapiens]
(619 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 1270 0.0
gi|34447231 3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 1254 0.0
gi|46094058 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Ho... 1008 0.0
gi|31317303 heat shock 70kD protein 12B [Homo sapiens] 33 0.60
gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens] 33 0.78
gi|90991702 leucine-rich repeat kinase 1 [Homo sapiens] 32 2.3
gi|4502227 ADP-ribosylation factor-like 1 [Homo sapiens] 31 3.9
gi|226529806 histone deacetylase 10 isoform 2 [Homo sapiens] 31 3.9
gi|20070354 histone deacetylase 10 isoform 1 [Homo sapiens] 31 3.9
gi|6631095 minichromosome maintenance complex component 3 [Homo ... 31 3.9
gi|25777650 small conductance calcium-activated potassium channe... 30 5.0
gi|116805330 small conductance calcium-activated potassium chann... 30 5.0
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 30 5.0
gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens] 30 6.6
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens] 30 6.6
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 30 8.6
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam... 30 8.6
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet... 30 8.6
gi|4502197 ADP-ribosylation factor domain protein 1 isoform alph... 30 8.6
>gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform b [Homo sapiens]
Length = 619
Score = 1270 bits (3286), Expect = 0.0
Identities = 619/619 (100%), Positives = 619/619 (100%)
Query: 1 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF 60
MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF
Sbjct: 1 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF 60
Query: 61 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS 120
ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS
Sbjct: 61 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS 120
Query: 121 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS 180
FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS
Sbjct: 121 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS 180
Query: 181 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE 240
DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE
Sbjct: 181 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE 240
Query: 241 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMS 300
AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMS
Sbjct: 241 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMS 300
Query: 301 IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH 360
IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH
Sbjct: 301 IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH 360
Query: 361 IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH 420
IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH
Sbjct: 361 IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH 420
Query: 421 NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS 480
NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS
Sbjct: 421 NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS 480
Query: 481 TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV 540
TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV
Sbjct: 481 TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV 540
Query: 541 LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF 600
LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF
Sbjct: 541 LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF 600
Query: 601 MAPKAWKVLTDYYRSLEKN 619
MAPKAWKVLTDYYRSLEKN
Sbjct: 601 MAPKAWKVLTDYYRSLEKN 619
>gi|34447231 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform a [Homo sapiens]
Length = 614
Score = 1254 bits (3244), Expect = 0.0
Identities = 614/619 (99%), Positives = 614/619 (99%), Gaps = 5/619 (0%)
Query: 1 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF 60
MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF
Sbjct: 1 MSGIKKQKTENQQKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISF 60
Query: 61 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS 120
ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS
Sbjct: 61 ALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITS 120
Query: 121 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS 180
FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS
Sbjct: 121 FISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDS 180
Query: 181 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE 240
DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE
Sbjct: 181 DYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAE 240
Query: 241 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMS 300
AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLD DGVINMS
Sbjct: 241 AETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLD-----DGVINMS 295
Query: 301 IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH 360
IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH
Sbjct: 296 IPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPH 355
Query: 361 IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH 420
IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH
Sbjct: 356 IKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVH 415
Query: 421 NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS 480
NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS
Sbjct: 416 NGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKS 475
Query: 481 TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV 540
TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV
Sbjct: 476 TIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKV 535
Query: 541 LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF 600
LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF
Sbjct: 536 LSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGF 595
Query: 601 MAPKAWKVLTDYYRSLEKN 619
MAPKAWKVLTDYYRSLEKN
Sbjct: 596 MAPKAWKVLTDYYRSLEKN 614
>gi|46094058 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo
sapiens]
Length = 624
Score = 1008 bits (2606), Expect = 0.0
Identities = 476/620 (76%), Positives = 543/620 (87%), Gaps = 11/620 (1%)
Query: 5 KKQKTENQ------QKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTI 58
KK K N Q++TNV YQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTT+
Sbjct: 9 KKVKLSNNAQNWGMQRATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTV 68
Query: 59 SFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCI 118
S ALEEYLV H IPCY+LDGDN+R GLN+NLGFSP DREEN+RRIAEVAKLFADAGLVCI
Sbjct: 69 SMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCI 128
Query: 119 TSFISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGI 178
TSFISP+ +DR NAR+IHE A LPFFE+FVDAPL++CE RDVKGLYK+ARAGEIKGFTGI
Sbjct: 129 TSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGI 188
Query: 179 DSDYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVR 238
DS+YEKPE PE VLKT+ V+DCV QVVELLQE++IVP ++ EL+VPENKL +
Sbjct: 189 DSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIVPVDASYEVKELYVPENKLHLAK 248
Query: 239 AEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVIN 298
+AETLP+L I K+D+QWVQVL+EGWATPL GFMRE+EYLQ +HFD LLDG GVIN
Sbjct: 249 TDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLLDG-----GVIN 303
Query: 299 MSIPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKH 358
+S+PIVL + EDK RL+GC+ F L + GRRVAILR+ EF+EHRKEERC+R WGTTC H
Sbjct: 304 LSVPIVLTATHEDKERLDGCTAFALMYEGRRVAILRNPEFFEHRKEERCARQWGTTCKNH 363
Query: 359 PHIKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNP 418
P+IKMVME GDWL+GGDLQVL+++ WNDGLDQYRLTP ELKQK K+MNADAVFAFQLRNP
Sbjct: 364 PYIKMVMEQGDWLIGGDLQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVFAFQLRNP 423
Query: 419 VHNGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDP 478
VHNGHALLMQDT ++LLERGY+ PVLLLHPLGGWTKDDDVPL WRMKQHAAVLEEGVL+P
Sbjct: 424 VHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTKDDDVPLMWRMKQHAAVLEEGVLNP 483
Query: 479 KSTIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGG 538
++T+VAIFPSPM+YAGPTEVQWHCR+RM+AGANFYIVGRDPAGMPHPET KDLYEP+HG
Sbjct: 484 ETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEPSHGA 543
Query: 539 KVLSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPD 598
KVL+MAPGL ++EI+PFRVAAYNK KK MD+YD H +F+FISGTRMRKLAREG+ PP+
Sbjct: 544 KVLTMAPGLITLEIVPFRVAAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQKPPE 603
Query: 599 GFMAPKAWKVLTDYYRSLEK 618
GFMAPKAW VLT+YY+SLEK
Sbjct: 604 GFMAPKAWTVLTEYYKSLEK 623
>gi|31317303 heat shock 70kD protein 12B [Homo sapiens]
Length = 686
Score = 33.5 bits (75), Expect = 0.60
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 30/133 (22%)
Query: 228 FVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLL 287
F E+ L +R ++ +LP K ++WV + W P K FMRE YL
Sbjct: 179 FFREHALQELREQSPSLPE----KDTVRWVLTVPAIWKQPAKQFMREAAYLA-------- 226
Query: 288 DGMALPDGVINMSIPIVLPVSAEDKTRLEGCSKFVL---------AHGGRRVAILR--DA 336
G+++ L ++ E + C K L A GG R+ R D+
Sbjct: 227 -------GLVSRENAEQLLIALEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERRSIDS 279
Query: 337 EFYEHRKEERCSR 349
F + R++ R SR
Sbjct: 280 SFRQAREQLRRSR 292
>gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens]
Length = 190
Score = 33.1 bits (74), Expect = 0.78
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 45 VWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGF 91
V+LTG G GKTT+ E L S +P + VR G R +GF
Sbjct: 5 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQG-GRRIGF 50
>gi|90991702 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 2015
Score = 31.6 bits (70), Expect = 2.3
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 208 ELLQEQNIVPYTIIKDIHELFVPENKLDHVRA----EAETLPSLSITKLDLQWVQVLSEG 263
+L +E+N + ++ + EL + +NKL + A ++L SL++++ +L +V +
Sbjct: 366 KLFEEENATNWIGLRKLQELDISDNKLTELPALFLHSFKSLNSLNVSRNNL---KVFPDP 422
Query: 264 WATPLK 269
WA PLK
Sbjct: 423 WACPLK 428
>gi|4502227 ADP-ribosylation factor-like 1 [Homo sapiens]
Length = 181
Score = 30.8 bits (68), Expect = 3.9
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 39 GFRGCTVWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGD 95
G R + + GL GAGKTTI + L+ V IP G NV +NL F D
Sbjct: 14 GTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTI---GFNVETVTYKNLKFQVWD 67
>gi|226529806 histone deacetylase 10 isoform 2 [Homo sapiens]
Length = 649
Score = 30.8 bits (68), Expect = 3.9
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 261 SEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMSIPIVLPVSAEDKTRLEGCSK 320
+E WA P + RE+ + LLDGM DG +N I P SA T L+ +
Sbjct: 421 TEAWARPHESLAREEALTALGKLLYLLDGML--DGQVNSGI-AATPASAAAAT-LDVAVR 476
Query: 321 FVLAHGGRRV 330
L+HG +R+
Sbjct: 477 RGLSHGAQRL 486
>gi|20070354 histone deacetylase 10 isoform 1 [Homo sapiens]
Length = 669
Score = 30.8 bits (68), Expect = 3.9
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 261 SEGWATPLKGFMREKEYLQVMHFDTLLDGMALPDGVINMSIPIVLPVSAEDKTRLEGCSK 320
+E WA P + RE+ + LLDGM DG +N I P SA T L+ +
Sbjct: 441 TEAWARPHESLAREEALTALGKLLYLLDGML--DGQVNSGI-AATPASAAAAT-LDVAVR 496
Query: 321 FVLAHGGRRV 330
L+HG +R+
Sbjct: 497 RGLSHGAQRL 506
>gi|6631095 minichromosome maintenance complex component 3 [Homo
sapiens]
Length = 808
Score = 30.8 bits (68), Expect = 3.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 95 DREENIRRIAEVAKLFADAGLVCITSFISPFAKDRENARKIHESAGLPFFEIFVDAPLN 153
D+E RR+ A + AD G+VCI F DR ++ E + + + A LN
Sbjct: 385 DQETGERRLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLN 443
>gi|25777650 small conductance calcium-activated potassium channel
protein 3 isoform b [Homo sapiens]
Length = 426
Score = 30.4 bits (67), Expect = 5.0
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 190 RVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHE--------LFVPENKLDHVRAEA 241
R +K +SD + +V+L + QN++ Y +I ++++ + E+KL+H+ A
Sbjct: 307 RSVKMEQRKLSDQANTLVDLSKMQNVM-YDLITELNDRSEDLEKQIGSLESKLEHLTASF 365
Query: 242 ETLPSLSITKLDLQWVQVLS 261
+LP L L Q Q+LS
Sbjct: 366 NSLPLLIADTLRQQQQQLLS 385
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 30.4 bits (67), Expect = 5.0
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 190 RVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHE--------LFVPENKLDHVRAEA 241
R +K +SD + +V+L + QN++ Y +I ++++ + E+KL+H+ A
Sbjct: 612 RSVKMEQRKLSDQANTLVDLSKMQNVM-YDLITELNDRSEDLEKQIGSLESKLEHLTASF 670
Query: 242 ETLPSLSITKLDLQWVQVLS 261
+LP L L Q Q+LS
Sbjct: 671 NSLPLLIADTLRQQQQQLLS 690
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.4 bits (67), Expect = 5.0
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 198 TVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAEAETL 244
TVS+ Q+ +L +EQN + + + H+L EN++ ++A+ E+L
Sbjct: 1270 TVSELEAQLRQLTEEQNTLNISFQQATHQLEEKENQIKSMKADIESL 1316
>gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]
Length = 860
Score = 30.0 bits (66), Expect = 6.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 308 SAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPHIKMV 364
S +D + G +++ G RR A+ R EF+ RKE + T + P +KMV
Sbjct: 657 SDDDPVLIPG-ARYRAGPGDRRSAVARIQEFFRRRKERKEMEELDTLNIRRPLVKMV 712
>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
Length = 880
Score = 30.0 bits (66), Expect = 6.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 308 SAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPHIKMV 364
S +D + G +++ G RR A+ R EF+ RKE + T + P +KMV
Sbjct: 677 SDDDPVLIPG-ARYRAGPGDRRSAVARIQEFFRRRKERKEMEELDTLNIRRPLVKMV 732
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 29.6 bits (65), Expect = 8.6
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 156 ESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPERVLKTNLSTVSDCV--HQVVELLQEQ 213
ESR + G +R RAG +DS KP T L ++ C+ +E +
Sbjct: 255 ESRHLSGARERGRAGRYSNRRNLDSLPRKPSTGFAALSRRVNQAISCLGTESALEKAEGP 314
Query: 214 NIVPYTIIKDIHELFVPENKLDH---VRAEAETLPSLSITKLDLQWVQV 259
+V +D H + N + + A ET ++ T+ L WV++
Sbjct: 315 TLVTQERWQDFHPSHLTWNPWINQLPLEANPETKGAV-YTETGLLWVEL 362
>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
[Homo sapiens]
Length = 546
Score = 29.6 bits (65), Expect = 8.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 49 GLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGD 95
GL GAGKTTI F L++ IP + + V + +NL F+ D
Sbjct: 411 GLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEY---KNLKFTIWD 454
>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
[Homo sapiens]
Length = 569
Score = 29.6 bits (65), Expect = 8.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 49 GLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGD 95
GL GAGKTTI F L++ IP + + V + +NL F+ D
Sbjct: 411 GLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEY---KNLKFTIWD 454
>gi|4502197 ADP-ribosylation factor domain protein 1 isoform alpha
[Homo sapiens]
Length = 574
Score = 29.6 bits (65), Expect = 8.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 49 GLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGD 95
GL GAGKTTI F L++ IP + + V + +NL F+ D
Sbjct: 411 GLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEY---KNLKFTIWD 454
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,008,943
Number of Sequences: 37866
Number of extensions: 1167507
Number of successful extensions: 2219
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2211
Number of HSP's gapped (non-prelim): 19
length of query: 619
length of database: 18,247,518
effective HSP length: 108
effective length of query: 511
effective length of database: 14,157,990
effective search space: 7234732890
effective search space used: 7234732890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.