Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 62899075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62899075 S100P binding protein isoform a [Homo sapiens]
(408 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62899075 S100P binding protein isoform a [Homo sapiens] 830 0.0
gi|62899077 S100P binding protein isoform b [Homo sapiens] 682 0.0
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 43 6e-04
gi|116517292 cut-like 2 [Homo sapiens] 39 0.008
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 38 0.014
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 38 0.014
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 38 0.014
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 37 0.025
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 37 0.025
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 37 0.025
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 37 0.025
gi|16975496 cortactin binding protein 2 [Homo sapiens] 37 0.032
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa... 37 0.042
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa... 37 0.042
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa... 37 0.042
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 37 0.042
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens] 36 0.055
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens] 36 0.055
gi|110347427 ubiquitin specific protease 34 [Homo sapiens] 36 0.055
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 36 0.055
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 36 0.072
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 35 0.094
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 35 0.12
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 35 0.16
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 35 0.16
gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens] 35 0.16
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 34 0.27
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 34 0.27
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 34 0.27
gi|56676335 RAP1 interacting factor 1 [Homo sapiens] 33 0.36
>gi|62899075 S100P binding protein isoform a [Homo sapiens]
Length = 408
Score = 830 bits (2144), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDA 60
MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDA
Sbjct: 1 MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDA 60
Query: 61 LLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLS 120
LLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLS
Sbjct: 61 LLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLS 120
Query: 121 TSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEE 180
TSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEE
Sbjct: 121 TSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEE 180
Query: 181 MREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSR 240
MREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSR
Sbjct: 181 MREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSR 240
Query: 241 ISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRLGKVIP 300
ISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRLGKVIP
Sbjct: 241 ISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRLGKVIP 300
Query: 301 VLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGISGELCALMDQVHHMQHS 360
VLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGISGELCALMDQVHHMQHS
Sbjct: 301 VLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGISGELCALMDQVHHMQHS 360
Query: 361 KWQHPSDLTTRNYARRQKHLQRYSLTQWVDRNMRSHHRFQRLPDFSYS 408
KWQHPSDLTTRNYARRQKHLQRYSLTQWVDRNMRSHHRFQRLPDFSYS
Sbjct: 361 KWQHPSDLTTRNYARRQKHLQRYSLTQWVDRNMRSHHRFQRLPDFSYS 408
>gi|62899077 S100P binding protein isoform b [Homo sapiens]
Length = 341
Score = 682 bits (1759), Expect = 0.0
Identities = 341/342 (99%), Positives = 341/342 (99%), Gaps = 1/342 (0%)
Query: 1 MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDA 60
MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDA
Sbjct: 1 MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDA 60
Query: 61 LLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLS 120
LLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLS
Sbjct: 61 LLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLS 120
Query: 121 TSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEE 180
TSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEE
Sbjct: 121 TSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEE 180
Query: 181 MREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSR 240
MREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSR
Sbjct: 181 MREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSR 240
Query: 241 ISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRLGKVIP 300
ISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNK DVLNKDSGKMKGHERRLGKVIP
Sbjct: 241 ISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNK-DVLNKDSGKMKGHERRLGKVIP 299
Query: 301 VLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQG 342
VLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQG
Sbjct: 300 VLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQG 341
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 42.7 bits (99), Expect = 6e-04
Identities = 59/278 (21%), Positives = 99/278 (35%), Gaps = 24/278 (8%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDP 67
S+ S S D DS D D S S D D + + + D+ + D
Sbjct: 567 SDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDS 626
Query: 68 SYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGP 127
S +S D + + S D +SS S +++ D S+ S
Sbjct: 627 SKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNS-SDSSD-------SSDSSDSS 678
Query: 128 AHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLS 187
+ + N + + D+ + +DSS ++ SS + S
Sbjct: 679 SSSDSSNSSDSSDSS--------------DSSNSSESSDSSDSSDSDSSDSSDSSNSNSS 724
Query: 188 PNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSET 247
++S ++S S NS+ + SSN++ SD + + +S S SD S +
Sbjct: 725 DSDSSNSSDSSDSS--NSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNS 782
Query: 248 PNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDS 285
+ S + S SS S S SS+ D + DS
Sbjct: 783 SDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDS 820
Score = 39.3 bits (90), Expect = 0.006
Identities = 60/272 (22%), Positives = 97/272 (35%), Gaps = 13/272 (4%)
Query: 25 SWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKG 84
S DS D D D S + S D D + + + D+ D SS D
Sbjct: 704 SSDSSDSDSSDSS--DSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 761
Query: 85 ERGSQIL-----LDTPREKNSSYS--LGPVAETPDLFKLPQLSTSSGHGPAH--TKPLNR 135
S D+ NSS S +++ D S SS + + +
Sbjct: 762 SNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Query: 136 RSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCT 195
S N + + + D+ D +DS SS + + S N S
Sbjct: 822 NSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSD 881
Query: 196 ESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSEN--PTSVFSRISDHSETPNMELS 253
S+ +NS+ + +SS+++ + + + DS N +S S SD+S + + S
Sbjct: 882 SSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNS 941
Query: 254 CRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDS 285
+ S SS S S SSN D + +S
Sbjct: 942 SDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNS 973
Score = 38.9 bits (89), Expect = 0.008
Identities = 59/275 (21%), Positives = 97/275 (35%), Gaps = 19/275 (6%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDP 67
S+ S ++ + + S DS D DS + D + + D+ D
Sbjct: 774 SDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSS 833
Query: 68 SYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGP 127
SS D G D+ +SS S +++ D S SS
Sbjct: 834 DSSNSSDSSDSSDSSDGSDS-----DSSNRSDSSNS----SDSSDSSDSSNSSDSSDSSD 884
Query: 128 AHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLS 187
++ + S N + D+ D +DSS ++ SS ++ S
Sbjct: 885 SNESSNSSDSSDSSN-------SSDSDSSDSSNSSDSSDSSNSSD--SSESSNSSDNSNS 935
Query: 188 PNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSET 247
+ S S+ +NS+ + SSN++ + + DS N +S S SD S++
Sbjct: 936 SDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSN-SSDSSDSSDSSDS 994
Query: 248 PNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLN 282
+ S + S SS S S SSN D N
Sbjct: 995 SDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSN 1029
Score = 38.5 bits (88), Expect = 0.011
Identities = 56/272 (20%), Positives = 96/272 (35%), Gaps = 31/272 (11%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDP 67
S+ S ++ + S DS D D S S D D + + + D
Sbjct: 792 SDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSD-------- 843
Query: 68 SYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGP 127
S + S G D S D+ NSS S +++ D + S SS
Sbjct: 844 SSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDS----SDSSDSNESSNSSDSSDSSN 899
Query: 128 AHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLS 187
+ + S ++ D ++SS +E +S D +
Sbjct: 900 SSDSDSSDSS-------------------NSSDSSDSSNSSDSSESSNSSDNSNSSDSSN 940
Query: 188 PNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSET 247
++S ++S S ++++ + S S+++ SD + + +S S SD S++
Sbjct: 941 SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000
Query: 248 PNMELSCRNGGSHKSSCEMRSLVVSTSSNKQD 279
N S + S SS S S SSN D
Sbjct: 1001 SNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSD 1032
Score = 37.7 bits (86), Expect = 0.019
Identities = 58/265 (21%), Positives = 97/265 (36%), Gaps = 31/265 (11%)
Query: 30 DEDGLDDSLLELSEGEEDDGDVNYTEEE-------IDALLKEDDPSYEQS--SGEDDGGH 80
+ +G DD+ E GD +Y +E D+ EDD S S + D G+
Sbjct: 470 ESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGN 529
Query: 81 VEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLE 140
G + +K+ S + D S SS + + N S +
Sbjct: 530 GNNG--------NDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSD 581
Query: 141 KNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGI 200
+ + D D +DSS ++ S D ++SK
Sbjct: 582 S----------SDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSK---SDSSK 628
Query: 201 SPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSH 260
S ++S+ + + SS++N + + + DS N +S S SD S++ + S + S
Sbjct: 629 SESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSN-SSNSSDSSDSSDSSDSSSSSDSSNSS 687
Query: 261 KSSCEMRSLVVSTSSNKQDVLNKDS 285
SS S S SS+ D + DS
Sbjct: 688 DSSDSSDSSNSSESSDSSDSSDSDS 712
Score = 36.6 bits (83), Expect = 0.042
Identities = 61/275 (22%), Positives = 104/275 (37%), Gaps = 18/275 (6%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDP 67
S SS +S D + S S D D S S + D N + D+ +
Sbjct: 746 SSDSSNSS----DSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDS--SDSSN 799
Query: 68 SYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGP 127
S + S+ D + + S D+ +SS S +++ D S+ S G
Sbjct: 800 SSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS-SDSSD-------SSDSSDG- 850
Query: 128 AHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLS 187
+ + NR + + N + D +E+ +S D+ S+ + D +
Sbjct: 851 SDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSN 910
Query: 188 PNESKLCTESEGISPN-NSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSE 246
++S + S S + NS+ N SSN++ SD + + +S S SD S+
Sbjct: 911 SSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSD 970
Query: 247 TPNMEL--SCRNGGSHKSSCEMRSLVVSTSSNKQD 279
+ + + S + S SS S S SSN D
Sbjct: 971 SNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSD 1005
Score = 35.4 bits (80), Expect = 0.094
Identities = 58/275 (21%), Positives = 96/275 (34%), Gaps = 31/275 (11%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDP 67
S S + + S DS D DS S D D + + + D+ D
Sbjct: 738 SNSSDSSDSSDSSNSSDSSDSSDSSNSSDS--SDSSDSSDSSDSSNSSDSNDSSNSSD-- 793
Query: 68 SYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGP 127
S + S+ D + + D+ +SS S +++ D S SS
Sbjct: 794 SSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNS----SDSSDSSNSSDSSDSSDSSD 849
Query: 128 AHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLS 187
+ RS ++ D +DSS ++ S +
Sbjct: 850 GSDSDSSNRS----------------DSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSD 893
Query: 188 PNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSD-KNMPDSENPTSVFSRISDHSE 246
++S ++S+ +NS+ + +SS+++ SD N DS N S SD S+
Sbjct: 894 SSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNS----SDSSDSSD 949
Query: 247 TPNMELSCRNGGSHKS--SCEMRSLVVSTSSNKQD 279
+ N S + S S S + S S SSN D
Sbjct: 950 SSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSD 984
Score = 35.0 bits (79), Expect = 0.12
Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 15/243 (6%)
Query: 44 GEEDDGDVNYTEEEIDALLKEDDP-SYEQSSGEDDGGHVE---KGERGSQILLDTPREKN 99
G + + D + + D ++ DDP S ++S+G DD RG + N
Sbjct: 442 GSDSNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDN 501
Query: 100 SSYSLGPVAETPDLFKLPQLSTSSGHGPAHT-KPLNRRSVLEKNLIKVTVAPFNPTVCDA 158
+ S AE D + S +G + N +S K + + D+
Sbjct: 502 GNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKG-------KSDSSDSDS 554
Query: 159 LLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNN 218
+ +DSS ++ SS + S ++S ++S+ +NS+ + SS+++
Sbjct: 555 SDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSS 614
Query: 219 FQQTVSD--KNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSN 276
SD + SE+ +S SD S++ N S N S SS S S SS+
Sbjct: 615 DSSDSSDSKSDSSKSESDSSDSDSKSDSSDS-NSSDSSDNSDSSDSSNSSNSSDSSDSSD 673
Query: 277 KQD 279
D
Sbjct: 674 SSD 676
Score = 35.0 bits (79), Expect = 0.12
Identities = 61/276 (22%), Positives = 99/276 (35%), Gaps = 14/276 (5%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDP 67
S+ S ++ + S D D D + S S D D + + + D+ + +
Sbjct: 830 SDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDS--SDSNE 887
Query: 68 SYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGP 127
S S D + S D+ NSS S +E+ + S SS
Sbjct: 888 SSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDS----SESSNSSDNSNSSDSSNSSD 943
Query: 128 AHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKL-SSLGEEMREDGL 186
+ + S N + N + D +DSS ++ SS + +
Sbjct: 944 SSDSSDSSNSSDSSNSSDSS----NSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSD 999
Query: 187 SPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSD-KNMPDS--ENPTSVFSRISD 243
S N S S+ +NS+ + SSN++ SD + DS + +S S SD
Sbjct: 1000 SSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 1059
Query: 244 HSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQD 279
S++ + S + S SS S S SSN D
Sbjct: 1060 SSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSD 1095
>gi|116517292 cut-like 2 [Homo sapiens]
Length = 1486
Score = 38.9 bits (89), Expect = 0.008
Identities = 43/165 (26%), Positives = 65/165 (39%), Gaps = 15/165 (9%)
Query: 9 EQSSGTSLLPK-----DGAPFSWDSLDEDGLDD-SLLELSEGEEDDGDVNYTEEEIDALL 62
+ S G +LP D P S DS ED LEL EG E++ T+++ +
Sbjct: 1239 DPSGGPGILPPGHSHPDPTPQSPDSETEDQKPTVKELELQEGPEENSTPLTTQDKAQVRI 1298
Query: 63 K----EDDPSYEQSSGEDDGGHVEKGERGSQILLDTP-----REKNSSYSLGPVAETPDL 113
K E+D E S D G ++KG+ + P K + L P TPD
Sbjct: 1299 KQEQMEEDAEEEAGSQPQDSGELDKGQGPPKEEHPDPPGNDGLPKVAPGPLLPGGSTPDC 1358
Query: 114 FKLPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDA 158
L S H PL+ +S E + + V+ +P+ +
Sbjct: 1359 PSLHPQQESEAGERLHPDPLSFKSASESSRCSLEVSLNSPSAASS 1403
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 38.1 bits (87), Expect = 0.014
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 27 DSLDEDGLDDSLLELS------EGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGH 80
D DEDG ++ E EG+EDD +V+ EEE L E+D ++ E++GG
Sbjct: 179 DEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFG--LDEEDEDEDEDEEEEEGGK 236
Query: 81 VEKGER 86
EK +R
Sbjct: 237 GEKRKR 242
Score = 31.6 bits (70), Expect = 1.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 27 DSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGE 85
D +DE+ D+ E EED+ D + EEE D E+D E G++D V + E
Sbjct: 163 DGVDEEEEDEE----GEDEEDEDDEDGEEEEFD----EEDDEDEDVEGDEDDDEVSEEE 213
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 38.1 bits (87), Expect = 0.014
Identities = 65/314 (20%), Positives = 107/314 (34%), Gaps = 17/314 (5%)
Query: 27 DSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHV--EKG 84
+ L ED +S ++S GEE+ D + + E D KE D +D G H +G
Sbjct: 655 EKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDDPGSHKRGRRG 714
Query: 85 ERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLEKNLI 144
+RG + R++ + V P L+ + +LEK
Sbjct: 715 KRGQNGFKEFTRQE----QINCVTREP-------LTADEEEALKQEHQRKEKELLEKIQS 763
Query: 145 KVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNN 204
+ P D + + S + + ED L P S + P
Sbjct: 764 AIACTNIFPLGRDRMYRRYWIFPSIPGLFIEEDYSGLTEDMLLPRPSSFQNNVQSQDPQV 823
Query: 205 SAWNG-PQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNME--LSCRNGGSHK 261
S G P +S S +N Q D ++ P +R +S ++ + N H+
Sbjct: 824 STKTGEPLMSESTSNIDQGPRDHSV-QLPKPVHKPNRWCFYSSCEQLDQLIEALNSRGHR 882
Query: 262 SSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQ 321
S +L+ S + K ++ P +N SQ E+Q
Sbjct: 883 ESALKETLLQEKSRICAQLARFSEEKFHFSDKPQPDSKPTYSRGRSSNAYDPSQMCAEKQ 942
Query: 322 KQLYLRSVIAHIED 335
+L LR + IED
Sbjct: 943 LELRLRDFLLDIED 956
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 38.1 bits (87), Expect = 0.014
Identities = 65/314 (20%), Positives = 107/314 (34%), Gaps = 17/314 (5%)
Query: 27 DSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHV--EKG 84
+ L ED +S ++S GEE+ D + + E D KE D +D G H +G
Sbjct: 687 EKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDDPGSHKRGRRG 746
Query: 85 ERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLEKNLI 144
+RG + R++ + V P L+ + +LEK
Sbjct: 747 KRGQNGFKEFTRQE----QINCVTREP-------LTADEEEALKQEHQRKEKELLEKIQS 795
Query: 145 KVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNN 204
+ P D + + S + + ED L P S + P
Sbjct: 796 AIACTNIFPLGRDRMYRRYWIFPSIPGLFIEEDYSGLTEDMLLPRPSSFQNNVQSQDPQV 855
Query: 205 SAWNG-PQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNME--LSCRNGGSHK 261
S G P +S S +N Q D ++ P +R +S ++ + N H+
Sbjct: 856 STKTGEPLMSESTSNIDQGPRDHSV-QLPKPVHKPNRWCFYSSCEQLDQLIEALNSRGHR 914
Query: 262 SSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQ 321
S +L+ S + K ++ P +N SQ E+Q
Sbjct: 915 ESALKETLLQEKSRICAQLARFSEEKFHFSDKPQPDSKPTYSRGRSSNAYDPSQMCAEKQ 974
Query: 322 KQLYLRSVIAHIED 335
+L LR + IED
Sbjct: 975 LELRLRDFLLDIED 988
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 37.4 bits (85), Expect = 0.025
Identities = 40/224 (17%), Positives = 84/224 (37%), Gaps = 9/224 (4%)
Query: 164 ETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTV 223
E + K K+S G DG ++ E+ + S N+ + TV
Sbjct: 430 EEEGLKYKSKVSLKGNR-ESDGFREEKNDKHKETGYVVERPSTTKDKHKEEDKNSERITV 488
Query: 224 SDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNK 283
+ + + + D+S + L R + + +R ++++ S++ +V K
Sbjct: 489 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 548
Query: 284 DSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGI 343
+ R P TK R T S ++Q+ RS+ HI+ P+ +
Sbjct: 549 MAPVPLDDSNR-----PASLTKDRLLASTLVHSVKKEQE---FRSIFDHIKLPQASKSTS 600
Query: 344 SGELCALMDQVHHMQHSKWQHPSDLTTRNYARRQKHLQRYSLTQ 387
+ ++ VHH++ ++ + + + QK + +S Q
Sbjct: 601 ESFIQHIVSLVHHVKEQYFKSAAMTLSERFTSYQKATEEHSTRQ 644
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 37.4 bits (85), Expect = 0.025
Identities = 40/224 (17%), Positives = 84/224 (37%), Gaps = 9/224 (4%)
Query: 164 ETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTV 223
E + K K+S G DG ++ E+ + S N+ + TV
Sbjct: 430 EEEGLKYKSKVSLKGNR-ESDGFREEKNDKHKETGYVVERPSTTKDKHKEEDKNSERITV 488
Query: 224 SDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNK 283
+ + + + D+S + L R + + +R ++++ S++ +V K
Sbjct: 489 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 548
Query: 284 DSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGI 343
+ R P TK R T S ++Q+ RS+ HI+ P+ +
Sbjct: 549 MAPVPLDDSNR-----PASLTKDRLLASTLVHSVKKEQE---FRSIFDHIKLPQASKSTS 600
Query: 344 SGELCALMDQVHHMQHSKWQHPSDLTTRNYARRQKHLQRYSLTQ 387
+ ++ VHH++ ++ + + + QK + +S Q
Sbjct: 601 ESFIQHIVSLVHHVKEQYFKSAAMTLSERFTSYQKATEEHSTRQ 644
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 37.4 bits (85), Expect = 0.025
Identities = 40/224 (17%), Positives = 83/224 (37%), Gaps = 9/224 (4%)
Query: 164 ETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTV 223
E + K K+S G DG ++ E+ + S N+ + TV
Sbjct: 430 EEEGLKYKSKVSLKGNR-ESDGFREEKNYKLKETGYVVERPSTTKDKHKEEDKNSERITV 488
Query: 224 SDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNK 283
+ + + + D+S + L R + + +R ++++ S++ +V K
Sbjct: 489 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 548
Query: 284 DSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGI 343
+ R P TK R T S ++Q+ RS+ HI+ P+ +
Sbjct: 549 MAPVPLDDSNR-----PASLTKDRLLASTLVHSVKKEQE---FRSIFDHIKLPQASKSTS 600
Query: 344 SGELCALMDQVHHMQHSKWQHPSDLTTRNYARRQKHLQRYSLTQ 387
+ ++ VHH++ ++ + + QK + +S Q
Sbjct: 601 ESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQ 644
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 37.4 bits (85), Expect = 0.025
Identities = 40/224 (17%), Positives = 83/224 (37%), Gaps = 9/224 (4%)
Query: 164 ETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTV 223
E + K K+S G DG ++ E+ + S N+ + TV
Sbjct: 432 EEEGLKYKSKVSLKGNR-ESDGFREEKNYKLKETGYVVERPSTTKDKHKEEDKNSERITV 490
Query: 224 SDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNK 283
+ + + + D+S + L R + + +R ++++ S++ +V K
Sbjct: 491 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 550
Query: 284 DSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGI 343
+ R P TK R T S ++Q+ RS+ HI+ P+ +
Sbjct: 551 MAPVPLDDSNR-----PASLTKDRLLASTLVHSVKKEQE---FRSIFDHIKLPQASKSTS 602
Query: 344 SGELCALMDQVHHMQHSKWQHPSDLTTRNYARRQKHLQRYSLTQ 387
+ ++ VHH++ ++ + + QK + +S Q
Sbjct: 603 ESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQ 646
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 37.0 bits (84), Expect = 0.032
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 38/219 (17%)
Query: 82 EKGERGSQILLDT-PREKNSSYSLGPVAETPDLFK-------LPQLSTSSGHGPAHTKPL 133
+KGE G+ ++T PR K+ +SL P PDL + QL+ + + K L
Sbjct: 1448 KKGESGAWRKVNTSPRRKSGRFSL-PTWNKPDLSTEGMKNKTISQLNCNRNASLSKQKSL 1506
Query: 134 NRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKL 193
L NL + +L DE D K+ + + S E + SK+
Sbjct: 1507 ENDLSLTLNLDQRL----------SLGSDDEADLVKELQSMCSSKSES-------DISKI 1549
Query: 194 CTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNM-PDSENPTSV-----------FSRI 241
+ + +S+ N P LS++ NN + VS K + P S + T+ SR+
Sbjct: 1550 ADSRDDLRMFDSSGNNPVLSATINNLRMPVSQKEVSPLSSHQTTECSNSKSKTELGVSRV 1609
Query: 242 SDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDV 280
P +++ + + +SS + + ++N ++V
Sbjct: 1610 KSFLPVPRSKVTQCSQNTKRSSSSSNTRQIEINNNSKEV 1648
>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
sapiens]
Length = 1323
Score = 36.6 bits (83), Expect = 0.042
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 22/221 (9%)
Query: 95 PREKNSSYSLGPVAETPDLFK-----LPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVA 149
PR ++ S S A TP + + +P L GPA T + K L A
Sbjct: 537 PRSESFSISGVQPARTPPMLRPVDPQIPHLVAVKSQGPALTASQSVHEQPTKGLSGFQEA 596
Query: 150 PFNPTVCDALLDKDETDSSKDTEKLSSLGEEM-------REDGLSPNESKLCTE-----S 197
N T + + +D + + L + E+ +E+ + P + T +
Sbjct: 597 -LNVTSHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPALA 655
Query: 198 EGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTS-VFSRISDHSETPNMELSCRN 256
SP N + GP+L S + P E+P S S S TP+ + S +
Sbjct: 656 RKNSPGNGSALGPRLGSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQG 715
Query: 257 G---GSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERR 294
G GS S E + ++ S VL + K+K E R
Sbjct: 716 GSQPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESR 756
>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
sapiens]
Length = 1331
Score = 36.6 bits (83), Expect = 0.042
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 22/221 (9%)
Query: 95 PREKNSSYSLGPVAETPDLFK-----LPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVA 149
PR ++ S S A TP + + +P L GPA T + K L A
Sbjct: 537 PRSESFSISGVQPARTPPMLRPVDPQIPHLVAVKSQGPALTASQSVHEQPTKGLSGFQEA 596
Query: 150 PFNPTVCDALLDKDETDSSKDTEKLSSLGEEM-------REDGLSPNESKLCTE-----S 197
N T + + +D + + L + E+ +E+ + P + T +
Sbjct: 597 -LNVTSHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPALA 655
Query: 198 EGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTS-VFSRISDHSETPNMELSCRN 256
SP N + GP+L S + P E+P S S S TP+ + S +
Sbjct: 656 RKNSPGNGSALGPRLGSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQG 715
Query: 257 G---GSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERR 294
G GS S E + ++ S VL + K+K E R
Sbjct: 716 GSQPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESR 756
>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
sapiens]
Length = 1352
Score = 36.6 bits (83), Expect = 0.042
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 22/221 (9%)
Query: 95 PREKNSSYSLGPVAETPDLFK-----LPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVA 149
PR ++ S S A TP + + +P L GPA T + K L A
Sbjct: 566 PRSESFSISGVQPARTPPMLRPVDPQIPHLVAVKSQGPALTASQSVHEQPTKGLSGFQEA 625
Query: 150 PFNPTVCDALLDKDETDSSKDTEKLSSLGEEM-------REDGLSPNESKLCTE-----S 197
N T + + +D + + L + E+ +E+ + P + T +
Sbjct: 626 -LNVTSHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPALA 684
Query: 198 EGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTS-VFSRISDHSETPNMELSCRN 256
SP N + GP+L S + P E+P S S S TP+ + S +
Sbjct: 685 RKNSPGNGSALGPRLGSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQG 744
Query: 257 G---GSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERR 294
G GS S E + ++ S VL + K+K E R
Sbjct: 745 GSQPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESR 785
>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
sapiens]
Length = 1360
Score = 36.6 bits (83), Expect = 0.042
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 22/221 (9%)
Query: 95 PREKNSSYSLGPVAETPDLFK-----LPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVA 149
PR ++ S S A TP + + +P L GPA T + K L A
Sbjct: 566 PRSESFSISGVQPARTPPMLRPVDPQIPHLVAVKSQGPALTASQSVHEQPTKGLSGFQEA 625
Query: 150 PFNPTVCDALLDKDETDSSKDTEKLSSLGEEM-------REDGLSPNESKLCTE-----S 197
N T + + +D + + L + E+ +E+ + P + T +
Sbjct: 626 -LNVTSHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPALA 684
Query: 198 EGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPTS-VFSRISDHSETPNMELSCRN 256
SP N + GP+L S + P E+P S S S TP+ + S +
Sbjct: 685 RKNSPGNGSALGPRLGSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQG 744
Query: 257 G---GSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERR 294
G GS S E + ++ S VL + K+K E R
Sbjct: 745 GSQPGSQAGSSERTRVRANSKSEGSPVLPHEPAKVKPEESR 785
>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
Length = 1259
Score = 36.2 bits (82), Expect = 0.055
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 167 SSKDTEKLSSLGEEMREDGLSPNESKL--CTES----EGISPNNSAWNGPQLS------S 214
S+K+T+ L + L SKL C + E SP+ SA G L+ S
Sbjct: 276 SNKETDPPPPLTRSNTANRLMKTLSKLNLCVDKTEKGESSSPSPSAEKGKILNVSVIEES 335
Query: 215 SNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTS 274
N N Q+ S K M E+ +S+ + + + + ++ N S + S E + S
Sbjct: 336 GNKNDQK--SQKIMKKKES-SSMLATVKEEVSGSSAAVT-ENADSDRISDE------ANS 385
Query: 275 SNKQDVLNKDSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIE 334
+ Q N+ S + + HE +LG+ ++++K ++ S S LE + L+SV HI
Sbjct: 386 NFNQGTENEQSKETQSHESKLGEESGIVESKLDSDFNISSHSELENSSE--LKSV--HIS 441
Query: 335 DPE 337
PE
Sbjct: 442 TPE 444
>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
Length = 1256
Score = 36.2 bits (82), Expect = 0.055
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 167 SSKDTEKLSSLGEEMREDGLSPNESKL--CTES----EGISPNNSAWNGPQLS------S 214
S+K+T+ L + L SKL C + E SP+ SA G L+ S
Sbjct: 276 SNKETDPPPPLTRSNTANRLMKTLSKLNLCVDKTEKGESSSPSPSAEKGKILNVSVIEES 335
Query: 215 SNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTS 274
N N Q+ S K M E+ +S+ + + + + ++ N S + S E + S
Sbjct: 336 GNKNDQK--SQKIMKKKES-SSMLATVKEEVSGSSAAVT-ENADSDRISDE------ANS 385
Query: 275 SNKQDVLNKDSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIE 334
+ Q N+ S + + HE +LG+ ++++K ++ S S LE + L+SV HI
Sbjct: 386 NFNQGTENEQSKETQSHESKLGEESGIVESKLDSDFNISSHSELENSSE--LKSV--HIS 441
Query: 335 DPE 337
PE
Sbjct: 442 TPE 444
>gi|110347427 ubiquitin specific protease 34 [Homo sapiens]
Length = 3546
Score = 36.2 bits (82), Expect = 0.055
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 8/117 (6%)
Query: 157 DALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSN 216
+AL ++DE D SS G ++R L +S+G+S N +SS
Sbjct: 618 EALKEEDEDDDHGHNPPKSSCGTDLRNRKLESQAGICLGDSQGMSERNG-------TSSG 670
Query: 217 NNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVST 273
+ +++P +N + S HSE P ++S +H + S + T
Sbjct: 671 TGKDLVFNTESLPSVDNRMRMLDACS-HSEDPEHDISGEMNATHIAQGSQESCITRT 726
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 36.2 bits (82), Expect = 0.055
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 167 SSKDTEKLSSLGEEMREDGLSPNESKLCTESEGIS---PNNSAWNGPQLSSSNNNFQQTV 223
+++ + +SL + + L+P ++ L ++ P+ N P ++ +N QQ++
Sbjct: 167 ANEQQTQCTSLRSQQNRNNLNPGQNSLSQSKNFMNVSGPHRVNVNHPPQMTNASNSQQSI 226
Query: 224 SDKNMPDSENPTSVFSRISDHSE------TPNMELSCRNGGSHKSS 263
S + + NP++ F + S H E +PNM SC S + S
Sbjct: 227 SMQQFSQTSNPSAHFHKCSSHQEGNFNGPSPNM-TSCSVSNSQQFS 271
Score = 29.6 bits (65), Expect = 5.1
Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 31/135 (22%)
Query: 171 TEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNM-- 228
+E L + E+ +S E++ +SE +SP N PQ + + + +D+ M
Sbjct: 2049 SENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVL--PQATGDQKSGGKCETDRRMVA 2106
Query: 229 ----PDSENPTSVFSRI--------------------SDHSETPNMELSC---RNGGSHK 261
P + NP S R+ S S + + SC R+G S
Sbjct: 2107 ARTEPLTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSS 2166
Query: 262 SSCEMRSLVVSTSSN 276
SS S S+SS+
Sbjct: 2167 SSSSCSSASSSSSSS 2181
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 35.8 bits (81), Expect = 0.072
Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 22/215 (10%)
Query: 45 EEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSS--- 101
EE + TEE + +E+ + E+ E++GG E+ E G + P E+ +S
Sbjct: 458 EEQTEETQVTEEVTE---EEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEK 514
Query: 102 YSLGPV---AETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDA 158
+ PV A++P K P+ PA K + K K +P
Sbjct: 515 EAKSPVKEEAKSPAEAKSPE--KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSP----- 567
Query: 159 LLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSS--N 216
+K+E S + + +E+ SP E+K + + SP P + S
Sbjct: 568 --EKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAK--SPEKAKSPVKEEAKSPAEAKSPVK 623
Query: 217 NNFQQTVSDKNMPDSENPTSVFSRISDHSETPNME 251
+ K+ +++PT ++ + +++P E
Sbjct: 624 EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKE 658
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 35.4 bits (80), Expect = 0.094
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 45 EEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSY-S 103
EE+ E E+ A + D + + +DD G ++K + G PR++N Y S
Sbjct: 547 EEERKKHRNNEMEVSANI-HDGATDDAEDDDDDDGLIQKRKSGETDHQQFPRKENKEYAS 605
Query: 104 LGPVAETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKD 163
GP + ++ K + + ++ + S+L L++V D+ L +
Sbjct: 606 SGPALQMKEV-KSTEKEKRTSKESVNSPVFGKASLLTGGLLQVD--------DDSSLSEI 656
Query: 164 ETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTV 223
+ D + T+K S+ +++ S ++ T+S + + SS NF +
Sbjct: 657 DEDEGRPTKKTSNEKNKVKNQIQSMDDVDDLTQSSETASEDCELP----HSSYKNFMLLI 712
Query: 224 SDKNMPDSENPTSVFSRISDHSETPNMELSC-RNGGSHKSSCEMRSLVVSTSSNKQDVLN 282
M ++ + + +I D + LSC R K+ CE+ ++ + +K +VL
Sbjct: 713 EQLGMECKDSVSLL--KIQDAA------LSCERLLELKKNHCELLTVKIKKMEDKVNVLQ 764
Query: 283 KDSGKMK 289
++ + K
Sbjct: 765 RELSETK 771
Score = 33.9 bits (76), Expect = 0.27
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 20/188 (10%)
Query: 106 PVAETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLEKNLIKVTV-APFNPTVCDALLDKDE 164
P ++PDL P + + G +P ++N I + AP T D L DE
Sbjct: 336 PTYQSPDLLPKPSHKSLANPGLMKEEPTKPGIAKKENGIDIIESAPLEQTNNDNLTYVDE 395
Query: 165 TDSSKDTEKLSSLGEEMREDGLSPNESKLCTES---EGISPNNSAWNGPQLSSSNNNFQQ 221
+ ++ +S+LG ED SP +S+ +E+ + + P A +G + + N +
Sbjct: 396 VHKNNRSDMMSALGLGQEEDIESPWDSESISENFPQKYVDPLAGAADGKEKNIGNEQAED 455
Query: 222 TV---------SDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVS 272
+ M E+ +V ++ H E+P L K + EM+ V +
Sbjct: 456 VFYIPSCMSGSRNFKMAKLEDTRNVGMPVA-HMESPERYLHL------KPTIEMKDSVPN 508
Query: 273 TSSNKQDV 280
+ +DV
Sbjct: 509 KAGGMKDV 516
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 35.0 bits (79), Expect = 0.12
Identities = 71/377 (18%), Positives = 139/377 (36%), Gaps = 51/377 (13%)
Query: 8 SEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDD--------GDVNYTEEEID 59
SE S G+ + ++ A +ED D + E G +D G T + D
Sbjct: 48 SESSEGSKVSSEEQA-------NEDPSDSTQSEEGLGSDDHQYIYRLAGGFSRSTGKGGD 100
Query: 60 ALLKEDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQL 119
++D S + + G+DD G K R++ + LG ++ D + +
Sbjct: 101 DKDDDEDDSGDDTFGDDDSGPGPKD-----------RQEGGNSRLGSDEDSDDTIQASEE 149
Query: 120 STSSGHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGE 179
S G A R + ++ + + T ++ ++ D E G
Sbjct: 150 SAPQGQDSAQDTTSESRELDNEDRVDSKPEGGDSTQ-ESESEEHWVGGGSDGESSHGDGS 208
Query: 180 EMREDGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPT-SVF 238
E+ ++G+ ++ + G S NSA + S N+ T E+P+ +F
Sbjct: 209 ELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIF 268
Query: 239 --SRISDHSETPNME-----LSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGH 291
SRIS+ + ++ ++ + S+ L +K D +DS +
Sbjct: 269 RKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGD-SQEDSKENLSQ 327
Query: 292 ERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRS-------VIAHIEDPEDTNQGIS 344
E P ++ N+ + +++ E Q+++ S +++ED ED++
Sbjct: 328 EESQNVDGPSSESSQEANLSS-QENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEE 386
Query: 345 GELCALMDQVHHMQHSK 361
D H + HSK
Sbjct: 387 -------DSSHTLSHSK 396
Score = 30.0 bits (66), Expect = 3.9
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 152 NPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTE-SEGIS-PNNSAWNG 209
N T+ + D E +S+DT LS + + D ++ L E S+ + P++ +
Sbjct: 285 NNTMEEVKSDSTENSNSRDTG-LSQPRRDSKGDSQEDSKENLSQEESQNVDGPSSESSQE 343
Query: 210 PQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSL 269
LSS N+ + + +NP S + D ++ + E + SH S
Sbjct: 344 ANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQ 403
Query: 270 VVSTSS 275
S SS
Sbjct: 404 ADSESS 409
Score = 28.9 bits (63), Expect = 8.8
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 36 DSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGERGSQIL---- 91
+ ++ S G+ D +Y E++ D+ E+D S+ S + + + S+ L
Sbjct: 357 EEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSE 416
Query: 92 --LDTPREKNSSYSLG 105
++P ++NSS G
Sbjct: 417 ESPESPEDENSSSQEG 432
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 34.7 bits (78), Expect = 0.16
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 19 KDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDD-------PSYEQ 71
++ P DE +++ E EGEED+ DV+ EEE + EDD P E+
Sbjct: 225 RNSVPQEGQYSDEGEVEEEQQE--EGEEDEDDVDVEEEEDE---DEDDRRTVDSIPEEEE 279
Query: 72 SSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGPAHTK 131
E++G E+GE D E+ SS G + FK P +
Sbjct: 280 EDEEEEGEEDEEGEG------DDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLASV 333
Query: 132 PLNRRSVLEKNLIKVTV--APFNPT-------VCDALLDKDETDSSKDTEKLSSLGEEMR 182
P ++ L+ + P+ T + D DK+ + + + + KL+ L + R
Sbjct: 334 PPMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEASVKLTELLDLYR 393
Query: 183 ED 184
ED
Sbjct: 394 ED 395
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 34.7 bits (78), Expect = 0.16
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 19 KDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDD-------PSYEQ 71
++ P DE +++ E EGEED+ DV+ EEE + EDD P E+
Sbjct: 225 RNSVPQEGQYSDEGEVEEEQQE--EGEEDEDDVDVEEEEDE---DEDDRRTVDSIPEEEE 279
Query: 72 SSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGPAHTK 131
E++G E+GE D E+ SS G + FK P +
Sbjct: 280 EDEEEEGEEDEEGEG------DDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLASV 333
Query: 132 PLNRRSVLEKNLIKVTV--APFNPT-------VCDALLDKDETDSSKDTEKLSSLGEEMR 182
P ++ L+ + P+ T + D DK+ + + + + KL+ L + R
Sbjct: 334 PPMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEASVKLTELLDLYR 393
Query: 183 ED 184
ED
Sbjct: 394 ED 395
>gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]
Length = 860
Score = 34.7 bits (78), Expect = 0.16
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 28 SLDEDGLDDSLLELSEGEEDDGDVNYTE--EEIDALLKEDDPSYEQSSGEDDGGHVEKGE 85
+L E L+ + SE EE++GDV + +E +A ++DD E+ GE+ ++
Sbjct: 245 TLPESDLESDSQDESE-EEEEGDVEKEKKAQEAEAQSEDDDEDTEEEQGEEKEKGAQEKR 303
Query: 86 RGSQILLDTPREKNSSYS 103
RG ++ EK+ + S
Sbjct: 304 RGKRVRFAEDEEKSENSS 321
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 33.9 bits (76), Expect = 0.27
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 30 DEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGERGSQ 89
+E D+ L E S+ +ED+ E+ D L EDD S E+ E+ E S+
Sbjct: 664 EEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEE--------EDSSE 715
Query: 90 ILLDTPREKNSSYSLGPVAETP 111
L D E+ + G V E P
Sbjct: 716 KLFDDSDERGTLGGFGSVEEGP 737
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 33.9 bits (76), Expect = 0.27
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 30 DEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGERGSQ 89
+E D+ L E S+ +ED+ E+ D L EDD S E+ E+ E S+
Sbjct: 664 EEGDADEKLFEESDDKEDEDADGKEVEDADEKLFEDDDSNEKLFDEE--------EDSSE 715
Query: 90 ILLDTPREKNSSYSLGPVAETP 111
L D E+ + G V E P
Sbjct: 716 KLFDDSDERGTLGGFGSVEEGP 737
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 33.9 bits (76), Expect = 0.27
Identities = 57/313 (18%), Positives = 117/313 (37%), Gaps = 36/313 (11%)
Query: 64 EDDPSYEQSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSS 123
++D S + + G+DD G K R++ + LG ++ D + + S
Sbjct: 89 DEDDSGDDTFGDDDSGPGPKD-----------RQEGGNSRLGSDEDSDDTIQASEESAPQ 137
Query: 124 GHGPAHTKPLNRRSVLEKNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMRE 183
G A R + ++ + + T ++ ++ D E G E+ +
Sbjct: 138 GQDSAQDTTSESRELDNEDRVDSKPEGGDSTQ-ESESEEHWVGGGSDGESSHGDGSELDD 196
Query: 184 DGLSPNESKLCTESEGISPNNSAWNGPQLSSSNNNFQQTVSDKNMPDSENPT-SVF--SR 240
+G+ ++ + G S NSA + S N+ T E+P+ +F SR
Sbjct: 197 EGMQSDDPESIRSERGNSRMNSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSR 256
Query: 241 ISDHSETPNME-----LSCRNGGSHKSSCEMRSLVVSTSSNKQDVLNKDSGKMKGHERRL 295
IS+ + ++ ++ + S+ L +K D +DS + E
Sbjct: 257 ISEEDDRSELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGD-SQEDSKENLSQEESQ 315
Query: 296 GKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRS-------VIAHIEDPEDTNQGISGELC 348
P ++ N+ + +++ E Q+++ S +++ED ED++
Sbjct: 316 NVDGPSSESSQEANLSS-QENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEE---- 370
Query: 349 ALMDQVHHMQHSK 361
D H + HSK
Sbjct: 371 ---DSSHTLSHSK 380
Score = 30.0 bits (66), Expect = 3.9
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 152 NPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTE-SEGIS-PNNSAWNG 209
N T+ + D E +S+DT LS + + D ++ L E S+ + P++ +
Sbjct: 269 NNTMEEVKSDSTENSNSRDTG-LSQPRRDSKGDSQEDSKENLSQEESQNVDGPSSESSQE 327
Query: 210 PQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSL 269
LSS N+ + + +NP S + D ++ + E + SH S
Sbjct: 328 ANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQ 387
Query: 270 VVSTSS 275
S SS
Sbjct: 388 ADSESS 393
Score = 28.9 bits (63), Expect = 8.8
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 36 DSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYEQSSGEDDGGHVEKGERGSQIL---- 91
+ ++ S G+ D +Y E++ D+ E+D S+ S + + + S+ L
Sbjct: 341 EEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSE 400
Query: 92 --LDTPREKNSSYSLG 105
++P ++NSS G
Sbjct: 401 ESPESPEDENSSSQEG 416
>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
Length = 2472
Score = 33.5 bits (75), Expect = 0.36
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 152 NPTVCDALLDKDETDSSKDT--EKLSSLGEEMREDGLSPNESKLCTESEGISPN-NSAWN 208
N T+ D+L+ ET S ++T E L S RE+ + S+ + SPN N
Sbjct: 1804 NDTINDSLI-VSETKSKENTMQESLPSGIVNFREEICDMDSSEAMSLESQESPNENFKTV 1862
Query: 209 GPQLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEM 266
GP L S N Q+++ K E P ETP MELS N ++C++
Sbjct: 1863 GPCLGDSKNVSQESLETKE----EKP----------EETPKMELSLENVTVEGNACKV 1906
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,303,274
Number of Sequences: 37866
Number of extensions: 844730
Number of successful extensions: 3495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 3114
Number of HSP's gapped (non-prelim): 420
length of query: 408
length of database: 18,247,518
effective HSP length: 105
effective length of query: 303
effective length of database: 14,271,588
effective search space: 4324291164
effective search space used: 4324291164
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.