Guide to the Human Genome
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Name: NDUFB9 Sequence: fasta or formatted (179aa) NCBI GI: 6274550
Description:

NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         12           1
 C cysteine            2.2          4           1
 D aspartate           4.5          8           2
 E glutamate          11.2         20           3
 F phenylalanine       3.4          6           1
 G glycine             3.4          6           2
 H histidine           2.8          5           1
 I isoleucine          1.1          2           1
 K lysine              7.8         14           2
 L leucine             8.9         16           2
 M methionine          2.8          5           1
 N asparagine          0.6          1           1
 P proline             9.5         17           2
 Q glutamine           5.0          9           2
 R arginine            9.5         17           2
 S serine              3.4          6           1
 T threonine           3.4          6           1
 V valine              2.8          5           1
 W tryptophan          4.5          8           2
 Y tyrosine            6.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9,... 
ZCCHC7                0.022   zinc finger, CCHC domain containing 7 
MPP4                  0.022   membrane protein, palmitoylated 4 
KIAA1543              0.019   NEZHA isoform 2 
KIAA1543              0.019   NEZHA isoform 1 
CRX                   0.019   cone-rod homeobox protein 
DUSP27                0.016   dual specificity phosphatase 27 
PDX1                  0.014   pancreatic and duodenal homeobox 1 
ARX                   0.014   aristaless related homeobox 
EVL                   0.014   Enah/Vasp-like 
NLRP12                0.014   NLR family, pyrin domain containing 12 isoform 2 [Ho...
RNF25                 0.014   ring finger protein 25 
GMIP                  0.011   GEM interacting protein 
DNAJC11               0.011   DnaJ (Hsp40) homolog, subfamily C, member 11 
KIAA1967              0.008   p30 DBC protein 
KIAA1967              0.008   p30 DBC protein 
XCR1                  0.008   XC chemokine receptor 1 
XCR1                  0.008   XC chemokine receptor 1 
KIAA1751              0.008   hypothetical protein LOC85452 
PRKAA1                0.008   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA1                0.008   protein kinase, AMP-activated, alpha 1 catalytic sub...
LOC283685             0.008   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LYRM4                 0.005   LYR motif containing 4 
MCM3                  0.005   minichromosome maintenance complex component 3 
TLK1                  0.005   tousled-like kinase 1 isoform 3 
TLK1                  0.005   tousled-like kinase 1 isoform 2 
TLK1                  0.005   tousled-like kinase 1 isoform 1 
BCCIP                 0.005   BRCA2 and CDKN1A-interacting protein isoform C [Homo...
BCCIP                 0.005   BRCA2 and CDKN1A-interacting protein isoform BCCIPalp...
TEKT4                 0.005   tektin 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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