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Search of human proteins with 13569840
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13569840 MACRO domain containing 1 [Homo sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13569840 MACRO domain containing 1 [Homo sapiens] 654 0.0
gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens] 249 2e-66
gi|207450721 ganglioside induced differentiation associated prot... 122 6e-28
gi|8923143 ganglioside induced differentiation associated protei... 122 6e-28
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom... 84 2e-16
gi|226371718 poly (ADP-ribose) polymerase family, member 9 isofo... 76 5e-14
gi|226371716 poly (ADP-ribose) polymerase family, member 9 isofo... 76 5e-14
gi|226371714 poly (ADP-ribose) polymerase family, member 9 isofo... 76 5e-14
gi|226371712 poly (ADP-ribose) polymerase family, member 9 isofo... 76 5e-14
gi|226371710 poly (ADP-ribose) polymerase family, member 9 isofo... 76 5e-14
gi|226371706 poly (ADP-ribose) polymerase family, member 9 isofo... 76 5e-14
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens] 69 6e-12
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens] 63 4e-10
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens] 63 4e-10
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens] 63 4e-10
gi|165377137 poly (ADP-ribose) polymerase family, member 15 isof... 54 2e-07
gi|22749259 poly (ADP-ribose) polymerase family, member 15 isofo... 44 1e-04
gi|23510448 minichromosome maintenance complex component 5 [Homo... 32 0.77
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 32 0.77
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 31 1.7
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 31 1.7
gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo ... 31 1.7
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 31 1.7
gi|239747803 PREDICTED: hypothetical protein XP_002348320 [Homo ... 31 1.7
gi|239741677 PREDICTED: hypothetical protein XP_002342280 [Homo ... 31 1.7
gi|205360947 microtubule associated monoxygenase, calponin and L... 31 1.7
gi|226530313 microtubule associated monoxygenase, calponin and L... 31 1.7
gi|31377579 zinc finger protein 785 [Homo sapiens] 30 2.9
gi|4505531 oxysterol binding protein [Homo sapiens] 30 2.9
gi|239756740 PREDICTED: similar to CMT1A duplicated region trans... 30 3.8
>gi|13569840 MACRO domain containing 1 [Homo sapiens]
Length = 325
Score = 654 bits (1687), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MSLQSRLSGRLAQLRAAGQLLVPPRPRPGHLAGATRTRSSTCGPPAFLGVFGRRARTSAG 60
MSLQSRLSGRLAQLRAAGQLLVPPRPRPGHLAGATRTRSSTCGPPAFLGVFGRRARTSAG
Sbjct: 1 MSLQSRLSGRLAQLRAAGQLLVPPRPRPGHLAGATRTRSSTCGPPAFLGVFGRRARTSAG 60
Query: 61 VGAWGAAAVGRTAGVRTWAPLAMAAKVDLSTSTDWKEAKSFLKGLSDKQREEHYFCKDFV 120
VGAWGAAAVGRTAGVRTWAPLAMAAKVDLSTSTDWKEAKSFLKGLSDKQREEHYFCKDFV
Sbjct: 61 VGAWGAAAVGRTAGVRTWAPLAMAAKVDLSTSTDWKEAKSFLKGLSDKQREEHYFCKDFV 120
Query: 121 RLKKIPTWKEMAKGVAVKVEEPRYKKDKQLNEKISLLRSDITKLEVDAIVNAANSSLLGG 180
RLKKIPTWKEMAKGVAVKVEEPRYKKDKQLNEKISLLRSDITKLEVDAIVNAANSSLLGG
Sbjct: 121 RLKKIPTWKEMAKGVAVKVEEPRYKKDKQLNEKISLLRSDITKLEVDAIVNAANSSLLGG 180
Query: 181 GGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQA 240
GGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQA
Sbjct: 181 GGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQA 240
Query: 241 AELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDR 300
AELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDR
Sbjct: 241 AELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDR 300
Query: 301 LIICVFLEKDEDIYRSRLPHYFPVA 325
LIICVFLEKDEDIYRSRLPHYFPVA
Sbjct: 301 LIICVFLEKDEDIYRSRLPHYFPVA 325
>gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens]
Length = 425
Score = 249 bits (636), Expect = 2e-66
Identities = 129/233 (55%), Positives = 161/233 (69%), Gaps = 4/233 (1%)
Query: 95 WKEAKSFLKGLSDKQREEHYFCKDFVRLKKIPTWKEMAKGVAVKVEEPRYKKD---KQLN 151
W+E K L ++ ++R + Y +D++ L I +WKE KG EE + K L
Sbjct: 11 WREEKERLLKMTLEERRKEYL-RDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLT 69
Query: 152 EKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAK 211
EK+SL R DIT LEVDAIVNAAN+SLLGGGGVDGCIHRAAGP L ECR L C TG AK
Sbjct: 70 EKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAK 129
Query: 212 ITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGV 271
IT GY LPAKYVIHTVGPIA G + S +L +CY SSL L+ E+ +RSVAFPCISTG+
Sbjct: 130 ITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGI 189
Query: 272 FGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRSRLPHYFPV 324
+G+P E AA I L T++EWL ++ +VDR+I CVFLE D IY+ ++ +F V
Sbjct: 190 YGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFFSV 242
>gi|207450721 ganglioside induced differentiation associated protein
2 isoform b [Homo sapiens]
Length = 496
Score = 122 bits (305), Expect = 6e-28
Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Query: 147 DKQLNEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCK 206
+K +N K+ L + D+ L AIVN +N SL V I AGP L ++ + L+ C+
Sbjct: 49 NKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCR 108
Query: 207 TGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPC 266
TG+AK+T G+ L A+++IHTVGP + + L SCY + L L E + SV F
Sbjct: 109 TGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCV 168
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRSRLPHYFP 323
I++ GYP E A I L T+R +LE H + +++++ V + +E Y+ LP YFP
Sbjct: 169 INSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAV-SDLEEGTYQKLLPLYFP 224
>gi|8923143 ganglioside induced differentiation associated protein 2
isoform a [Homo sapiens]
Length = 497
Score = 122 bits (305), Expect = 6e-28
Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Query: 147 DKQLNEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCK 206
+K +N K+ L + D+ L AIVN +N SL V I AGP L ++ + L+ C+
Sbjct: 49 NKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCR 108
Query: 207 TGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPC 266
TG+AK+T G+ L A+++IHTVGP + + L SCY + L L E + SV F
Sbjct: 109 TGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCV 168
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRSRLPHYFP 323
I++ GYP E A I L T+R +LE H + +++++ V + +E Y+ LP YFP
Sbjct: 169 INSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAV-SDLEEGTYQKLLPLYFP 224
>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
sapiens]
Length = 1801
Score = 84.0 bits (206), Expect = 2e-16
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 158 RSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCK----TGKAKIT 213
+ D+ +L VD +VNA+N L GG+ + +AAGP L +C + + G A I+
Sbjct: 808 QGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATIS 867
Query: 214 GGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFG 273
+LP +VIH VGP G + LR SL L +++ RS+A P IS+GVFG
Sbjct: 868 KAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFG 927
Query: 274 YPCEAAAEIVLATLREWLEQHKD----------KVDRLIICVFLEKDEDIYRSRLP 319
+P E +++ ++E + KD V + F E + ++++ LP
Sbjct: 928 FPLGRCVETIVSAIKENFQFKKDGHCLKEIYLVDVSEKTVEAFAEAVKTVFKATLP 983
Score = 52.8 bits (125), Expect = 4e-07
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 156 LLRSDITKLEVDAIVNAANSSL-LGGGGVDGCIHRAAGPLLTDECRTLQ---SCKTGKAK 211
L++ + + D +VN+ L L G + + AGP L +E T+ + G
Sbjct: 1018 LVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQGVAVSMGTVL 1077
Query: 212 ITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGV 271
T + L +YV+H V P + S S + +++ L+S+AFP I TG
Sbjct: 1078 KTSSWNLDCRYVLHVVAP-EWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGN 1136
Query: 272 FGYPCEAAAEIVLATLREWLEQHKDK 297
G+P AE++++ + ++ +++ K
Sbjct: 1137 LGFPKNIFAELIISEVFKFSSKNQLK 1162
Score = 52.4 bits (124), Expect = 6e-07
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 160 DITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLP 219
DITK E D IVN+ ++S GV I AG + EC + ITGG L
Sbjct: 1235 DITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQQRKNDYIITGGGFLR 1294
Query: 220 AKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAA 279
K +IH +G +++S S L + S+ P I TG +
Sbjct: 1295 CKNIIHVIG-----------GNDVKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKV 1343
Query: 280 AEIVLATLREWLEQ-HKDKVDRLIICVFLEKDEDIYRSRL 318
AE ++ + +++++ V ++ + +FL + D++ + +
Sbjct: 1344 AEAIIDAIEDFVQKGSAQSVKKVKVVIFLPQVLDVFYANM 1383
>gi|226371718 poly (ADP-ribose) polymerase family, member 9 isoform
c [Homo sapiens]
Length = 710
Score = 75.9 bits (185), Expect = 5e-14
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 153 KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----CKTG 208
++S+ + D+T VDA+VNAAN LL GGG+ + +A G + +E + + G
Sbjct: 84 ELSVWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAG 143
Query: 209 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLL--EHRLRSVAFPC 266
+ +TG RLP K +IH VGP +L+ +S L+ ++ +++VA P
Sbjct: 144 EIAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPA 203
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLE 292
+S+G+F +P + ++ T+R L+
Sbjct: 204 LSSGIFQFPLNLCTKTIVETIRVSLQ 229
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDE---CRTLQSCKT 207
N + +++ I D IVN+ N + G V I + AG + E + Q ++
Sbjct: 281 NLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKAKQFQRS 340
Query: 208 GKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCI 267
+T G+ L KY+ H + + +P + A ++ C L+ +E + S++FP +
Sbjct: 341 QLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHA-MKEC----LEKCIEQNITSISFPAL 395
Query: 268 STGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRS 316
TG E AAEI+ + + + H K + V D +IY++
Sbjct: 396 GTGNMEIKKETAAEILFDEVLTFAKDHV-KHQLTVKFVIFPTDLEIYKA 443
>gi|226371716 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 75.9 bits (185), Expect = 5e-14
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 153 KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----CKTG 208
++S+ + D+T VDA+VNAAN LL GGG+ + +A G + +E + + G
Sbjct: 84 ELSVWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAG 143
Query: 209 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLL--EHRLRSVAFPC 266
+ +TG RLP K +IH VGP +L+ +S L+ ++ +++VA P
Sbjct: 144 EIAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPA 203
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLE 292
+S+G+F +P + ++ T+R L+
Sbjct: 204 LSSGIFQFPLNLCTKTIVETIRVSLQ 229
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDE---CRTLQSCKT 207
N + +++ I D IVN+ N + G V I + AG + E + Q ++
Sbjct: 281 NLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKAKQFQRS 340
Query: 208 GKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCI 267
+T G+ L KY+ H + + +P + A ++ C L+ +E + S++FP +
Sbjct: 341 QLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHA-MKEC----LEKCIEQNITSISFPAL 395
Query: 268 STGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRS 316
TG E AAEI+ + + + H K + V D +IY++
Sbjct: 396 GTGNMEIKKETAAEILFDEVLTFAKDHV-KHQLTVKFVIFPTDLEIYKA 443
>gi|226371714 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 75.9 bits (185), Expect = 5e-14
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 153 KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----CKTG 208
++S+ + D+T VDA+VNAAN LL GGG+ + +A G + +E + + G
Sbjct: 84 ELSVWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAG 143
Query: 209 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLL--EHRLRSVAFPC 266
+ +TG RLP K +IH VGP +L+ +S L+ ++ +++VA P
Sbjct: 144 EIAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPA 203
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLE 292
+S+G+F +P + ++ T+R L+
Sbjct: 204 LSSGIFQFPLNLCTKTIVETIRVSLQ 229
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDE---CRTLQSCKT 207
N + +++ I D IVN+ N + G V I + AG + E + Q ++
Sbjct: 281 NLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKAKQFQRS 340
Query: 208 GKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCI 267
+T G+ L KY+ H + + +P + A ++ C L+ +E + S++FP +
Sbjct: 341 QLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHA-MKEC----LEKCIEQNITSISFPAL 395
Query: 268 STGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRS 316
TG E AAEI+ + + + H K + V D +IY++
Sbjct: 396 GTGNMEIKKETAAEILFDEVLTFAKDHV-KHQLTVKFVIFPTDLEIYKA 443
>gi|226371712 poly (ADP-ribose) polymerase family, member 9 isoform
b [Homo sapiens]
Length = 819
Score = 75.9 bits (185), Expect = 5e-14
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 153 KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----CKTG 208
++S+ + D+T VDA+VNAAN LL GGG+ + +A G + +E + + G
Sbjct: 84 ELSVWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAG 143
Query: 209 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLL--EHRLRSVAFPC 266
+ +TG RLP K +IH VGP +L+ +S L+ ++ +++VA P
Sbjct: 144 EIAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPA 203
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLE 292
+S+G+F +P + ++ T+R L+
Sbjct: 204 LSSGIFQFPLNLCTKTIVETIRVSLQ 229
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDE---CRTLQSCKT 207
N + +++ I D IVN+ N + G V I + AG + E + Q ++
Sbjct: 281 NLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKAKQFQRS 340
Query: 208 GKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCI 267
+T G+ L KY+ H + + +P + A ++ C L+ +E + S++FP +
Sbjct: 341 QLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHA-MKEC----LEKCIEQNITSISFPAL 395
Query: 268 STGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRS 316
TG E AAEI+ + + + H K + V D +IY++
Sbjct: 396 GTGNMEIKKETAAEILFDEVLTFAKDHV-KHQLTVKFVIFPTDLEIYKA 443
>gi|226371710 poly (ADP-ribose) polymerase family, member 9 isoform
a [Homo sapiens]
Length = 854
Score = 75.9 bits (185), Expect = 5e-14
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 153 KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----CKTG 208
++S+ + D+T VDA+VNAAN LL GGG+ + +A G + +E + + G
Sbjct: 119 ELSVWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAG 178
Query: 209 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLL--EHRLRSVAFPC 266
+ +TG RLP K +IH VGP +L+ +S L+ ++ +++VA P
Sbjct: 179 EIAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPA 238
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLE 292
+S+G+F +P + ++ T+R L+
Sbjct: 239 LSSGIFQFPLNLCTKTIVETIRVSLQ 264
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDE---CRTLQSCKT 207
N + +++ I D IVN+ N + G V I + AG + E + Q ++
Sbjct: 316 NLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKAKQFQRS 375
Query: 208 GKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCI 267
+T G+ L KY+ H + + +P + A ++ C L+ +E + S++FP +
Sbjct: 376 QLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHA-MKEC----LEKCIEQNITSISFPAL 430
Query: 268 STGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRS 316
TG E AAEI+ + + + H K + V D +IY++
Sbjct: 431 GTGNMEIKKETAAEILFDEVLTFAKDHV-KHQLTVKFVIFPTDLEIYKA 478
>gi|226371706 poly (ADP-ribose) polymerase family, member 9 isoform
a [Homo sapiens]
Length = 854
Score = 75.9 bits (185), Expect = 5e-14
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 153 KISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS----CKTG 208
++S+ + D+T VDA+VNAAN LL GGG+ + +A G + +E + + G
Sbjct: 119 ELSVWKDDLTTHAVDAVVNAANEDLLHGGGLALALVKAGGFEIQEESKQFVARYGKVSAG 178
Query: 209 KAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLL--EHRLRSVAFPC 266
+ +TG RLP K +IH VGP +L+ +S L+ ++ +++VA P
Sbjct: 179 EIAVTGAGRLPCKQIIHAVGPRWMEWDKQGCTGKLQRAIVSILNYVIYKNTHIKTVAIPA 238
Query: 267 ISTGVFGYPCEAAAEIVLATLREWLE 292
+S+G+F +P + ++ T+R L+
Sbjct: 239 LSSGIFQFPLNLCTKTIVETIRVSLQ 264
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDE---CRTLQSCKT 207
N + +++ I D IVN+ N + G V I + AG + E + Q ++
Sbjct: 316 NLTLQIVQGHIEWQTADVIVNSVNPHDITVGPVAKSILQQAGVEMKSEFLATKAKQFQRS 375
Query: 208 GKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCI 267
+T G+ L KY+ H + + +P + A ++ C L+ +E + S++FP +
Sbjct: 376 QLVLVTKGFNLFCKYIYHVLWHSEFPKPQILKHA-MKEC----LEKCIEQNITSISFPAL 430
Query: 268 STGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRS 316
TG E AAEI+ + + + H K + V D +IY++
Sbjct: 431 GTGNMEIKKETAAEILFDEVLTFAKDHV-KHQLTVKFVIFPTDLEIYKA 478
>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
Length = 369
Score = 68.9 bits (167), Expect = 6e-12
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 150 LNEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGK 209
L +K+ ++++DI ++ DA+V+ N+ GG V + + G + L+ K G
Sbjct: 193 LGQKLQVVQADIASIDSDAVVHPTNTDFYIGGEVGNTLEKKGGKEFVEAVLELRK-KNGP 251
Query: 210 AKITG-----GYRLPAKYVIHTVGPIAYGEPSASQAAE--LRSCYLSSLDLLLEHRLRSV 262
++ G G+ LPAK+VIH P+ +G + E +++C L L + +L+S+
Sbjct: 252 LEVAGAAVSAGHGLPAKFVIHCNSPV-WGADKCEELLEKTVKNC----LALADDKKLKSI 306
Query: 263 AFPCISTGVFGYPCEAAAEIVLATLREW 290
AFP I +G G+P + AA+++L + +
Sbjct: 307 AFPSIGSGRNGFPKQTAAQLILKAISSY 334
>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
Length = 371
Score = 62.8 bits (151), Expect = 4e-10
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 150 LNEKISLLRSDITKL---EVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCK 206
L +K++L+ S+I+ L EV+AI+N N+ + + + + G + L+ K
Sbjct: 192 LGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKEFVEAVLELRK-K 250
Query: 207 TGKAKITG-----GYRLPAKYVIHTVGPIAYGEPSASQAAE--LRSCYLSSLDLLLEHRL 259
G ++ G G+ LPAK+VIH P+ +G + E +++C L L + +L
Sbjct: 251 NGPLEVAGAAVSAGHGLPAKFVIHCNSPV-WGADKCEELLEKTVKNC----LALADDKKL 305
Query: 260 RSVAFPCISTGVFGYPCEAAAEIVLATLREW 290
+S+AFP I +G G+P + AA+++L + +
Sbjct: 306 KSIAFPSIGSGRNGFPKQTAAQLILKAISSY 336
>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
Length = 371
Score = 62.8 bits (151), Expect = 4e-10
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 150 LNEKISLLRSDITKL---EVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCK 206
L +K++L+ S+I+ L EV+AI+N N+ + + + + G + L+ K
Sbjct: 192 LGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKEFVEAVLELRK-K 250
Query: 207 TGKAKITG-----GYRLPAKYVIHTVGPIAYGEPSASQAAE--LRSCYLSSLDLLLEHRL 259
G ++ G G+ LPAK+VIH P+ +G + E +++C L L + +L
Sbjct: 251 NGPLEVAGAAVSAGHGLPAKFVIHCNSPV-WGADKCEELLEKTVKNC----LALADDKKL 305
Query: 260 RSVAFPCISTGVFGYPCEAAAEIVLATLREW 290
+S+AFP I +G G+P + AA+++L + +
Sbjct: 306 KSIAFPSIGSGRNGFPKQTAAQLILKAISSY 336
>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
Length = 372
Score = 62.8 bits (151), Expect = 4e-10
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 150 LNEKISLLRSDITKL---EVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCK 206
L +K++L+ S+I+ L EV+AI+N N+ + + + + G + L+ K
Sbjct: 193 LGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKEFVEAVLELRK-K 251
Query: 207 TGKAKITG-----GYRLPAKYVIHTVGPIAYGEPSASQAAE--LRSCYLSSLDLLLEHRL 259
G ++ G G+ LPAK+VIH P+ +G + E +++C L L + +L
Sbjct: 252 NGPLEVAGAAVSAGHGLPAKFVIHCNSPV-WGADKCEELLEKTVKNC----LALADDKKL 306
Query: 260 RSVAFPCISTGVFGYPCEAAAEIVLATLREW 290
+S+AFP I +G G+P + AA+++L + +
Sbjct: 307 KSIAFPSIGSGRNGFPKQTAAQLILKAISSY 337
>gi|165377137 poly (ADP-ribose) polymerase family, member 15 isoform
1 [Homo sapiens]
Length = 678
Score = 53.9 bits (128), Expect = 2e-07
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 154 ISLLRSDITKLEVDAIVNAANSSL-LGGGGVDGCIHRAAGPLLT---DECRTLQSCKTGK 209
+ L+ D+ + D IVN+ +L LGGG + + AGP+L D+ R K G
Sbjct: 91 LKLISGDVLYIWADVIVNSVPMNLQLGGGPLSRAFLQKAGPMLQKELDDRRRETEEKVGN 150
Query: 210 AKITGGYRLPAKYVIHTVGPIAYGEPSAS---QAAELRSCYLSSLDLLLEHRLRSVAFPC 266
+T G L K V+H V P S A ++ C L+++++L S+ FP
Sbjct: 151 IFMTSGCNLDCKAVLHAVAPYWNNGAETSWQIMANIIKKC-LTTVEVL---SFSSITFPM 206
Query: 267 ISTGVFGYPCEAAAEIVLATLREW 290
I TG +P A+++L+ + E+
Sbjct: 207 IGTGSLQFPKAVFAKLILSEVFEY 230
Score = 44.3 bits (103), Expect = 1e-04
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 160 DITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLP 219
DI +VD IVN+ + GV I AG + EC L + IT G L
Sbjct: 312 DIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLK 371
Query: 220 AKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAA 279
K +IH G ++R S L+ + + SV+ P I TG G
Sbjct: 372 CKIIIHVPG-----------GKDVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITV 420
Query: 280 AEIVLATLREWLEQH 294
A+ ++ + ++ QH
Sbjct: 421 ADNIIDAIVDFSSQH 435
>gi|22749259 poly (ADP-ribose) polymerase family, member 15 isoform
2 [Homo sapiens]
Length = 444
Score = 44.3 bits (103), Expect = 1e-04
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 160 DITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLP 219
DI +VD IVN+ + GV I AG + EC L + IT G L
Sbjct: 78 DIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLK 137
Query: 220 AKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAA 279
K +IH G ++R S L+ + + SV+ P I TG G
Sbjct: 138 CKIIIHVPG-----------GKDVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITV 186
Query: 280 AEIVLATLREWLEQH 294
A+ ++ + ++ QH
Sbjct: 187 ADNIIDAIVDFSSQH 201
>gi|23510448 minichromosome maintenance complex component 5 [Homo
sapiens]
Length = 734
Score = 32.0 bits (71), Expect = 0.77
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 94 DWKEAKSFLKGLSD---KQREEHYFCKDFVRLKKIPTWKEMAKGVAVKVEEPRYKKDKQL 150
+ ++ SF + L+D KQ EH + +E AK VA +V PR ++ L
Sbjct: 73 EMEDLASFDEDLADYLYKQPAEH-----------LQLLEEAAKEVADEVTRPRPSGEEVL 121
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLLGGGG--VDGCIHRAAGPLLTDECRTLQSCKTG 208
+ +L+SD + + ++ + S L+ G + RA ++ +CR+ ++ T
Sbjct: 122 QDIQVMLKSDASPSSIRSLKSDMMSHLVKIPGIIIAASAVRAKATRISIQCRSCRNTLTN 181
Query: 209 KAKITG--GYRLPAK 221
A G GY LP K
Sbjct: 182 IAMRPGLEGYALPRK 196
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 32.0 bits (71), Expect = 0.77
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 23 PPRPRPGHLAGATRTRSSTCGPPAFLGVFGRRA---RTSAGVGAWGAAAVGRTA 73
PP P PG L+ A+R+R++ P F G G +A R G G A+GR A
Sbjct: 243 PPAPGPGALSRASRSRAAGRPGPGFHG--GEKAAAPRAPGGGGGRNPGALGRAA 294
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 30.8 bits (68), Expect = 1.7
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 140 EEPRYKKD-KQLNEKISLLRSDITKLEVDAIVNAANSSLLGGGGV 183
E YKKD K L EK+SLL+ D+++ E + ++S L G+
Sbjct: 646 EIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGL 690
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 30.8 bits (68), Expect = 1.7
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 140 EEPRYKKD-KQLNEKISLLRSDITKLEVDAIVNAANSSLLGGGGV 183
E YKKD K L EK+SLL+ D+++ E + ++S L G+
Sbjct: 618 EIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGL 662
>gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo
sapiens]
Length = 180
Score = 30.8 bits (68), Expect = 1.7
Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 6 RLSGRLAQLRAAGQLLVPPRPRPGHLAGATR-TRSSTCGPPAFLGVFGRRARTSAGVGAW 64
R GRL AG V P RP H ++R TRS+T P GR T
Sbjct: 80 RKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRR----TGRWLNTMPSWNVV 135
Query: 65 GAAAVGRTAGVRTWAPLAMAAKVDLS----TSTDWKEAKS 100
A+ RT APLA A K S ST W +++
Sbjct: 136 RLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRA 175
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 30.8 bits (68), Expect = 1.7
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 138 KVEEPRYKKDKQLNEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTD 197
K +E + KK K+ +K L + + LE+ A + ++ G G G + +AAG +++
Sbjct: 94 KEKEKKKKKKKKKKKKKKKLNAKVCGLEI-ASWSEMTTAAAGEGEEQGSMVQAAGVSISN 152
Query: 198 ECRTLQSCKTGKAKITGGYRLPAKYVIHTVGPIA 231
+ K G + TG P ++ + P++
Sbjct: 153 SSPSRSDGKEGWTRFTGHGESPTRFKTGRLYPLS 186
>gi|239747803 PREDICTED: hypothetical protein XP_002348320 [Homo
sapiens]
Length = 180
Score = 30.8 bits (68), Expect = 1.7
Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 6 RLSGRLAQLRAAGQLLVPPRPRPGHLAGATR-TRSSTCGPPAFLGVFGRRARTSAGVGAW 64
R GRL AG V P RP H ++R TRS+T P GR T
Sbjct: 80 RKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRR----TGRWLNTMPSWNVV 135
Query: 65 GAAAVGRTAGVRTWAPLAMAAKVDLS----TSTDWKEAKS 100
A+ RT APLA A K S ST W +++
Sbjct: 136 RLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRA 175
>gi|239741677 PREDICTED: hypothetical protein XP_002342280 [Homo
sapiens]
Length = 180
Score = 30.8 bits (68), Expect = 1.7
Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 6 RLSGRLAQLRAAGQLLVPPRPRPGHLAGATR-TRSSTCGPPAFLGVFGRRARTSAGVGAW 64
R GRL AG V P RP H ++R TRS+T P GR T
Sbjct: 80 RKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRSTRSATRSPRR----TGRWLNTMPSWNVV 135
Query: 65 GAAAVGRTAGVRTWAPLAMAAKVDLS----TSTDWKEAKS 100
A+ RT APLA A K S ST W +++
Sbjct: 136 RLCAMQPRVSRRTCAPLASAWKRSASRGALASTYWPRSRA 175
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 30.8 bits (68), Expect = 1.7
Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 22/182 (12%)
Query: 2 SLQSRLSGRLAQLRAAGQLLVPPRP--RPGHLAGATRTRSSTCG------------PPAF 47
S+ LS A AG + P +P R L+ R R S+ PP
Sbjct: 777 SMPPGLSTPTASQEGAGPVPDPSQPTRRQIRLSSPERQRLSSLNLTPDPEMEPPPKPPRS 836
Query: 48 LGVFGRRARTSAGVGAWGAAAVGRTAGVRTWAPLAMAAKVDLSTSTDWKEAKSFLKGLSD 107
R A S+ VG WG V++ L K + + +E + + SD
Sbjct: 837 CSALARHALESSFVG-WGLP-------VQSPQALVAMEKEEKESPFSSEEEEEDVPLDSD 888
Query: 108 KQREEHYFCKDFVRLKKIPTWKEMAKGVAVKVEEPRYKKDKQLNEKISLLRSDITKLEVD 167
++ F K + PTW+ A + E R+ K + + +++ + + + +LE +
Sbjct: 889 VEQALQTFAKTSGTMNNYPTWRRTLLRRAKEEEMKRFCKAQTIQRRLNEIEAALRELEAE 948
Query: 168 AI 169
+
Sbjct: 949 GV 950
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 30.8 bits (68), Expect = 1.7
Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 22/182 (12%)
Query: 2 SLQSRLSGRLAQLRAAGQLLVPPRP--RPGHLAGATRTRSSTCG------------PPAF 47
S+ LS A AG + P +P R L+ R R S+ PP
Sbjct: 691 SMPPGLSTPTASQEGAGPVPDPSQPTRRQIRLSSPERQRLSSLNLTPDPEMEPPPKPPRS 750
Query: 48 LGVFGRRARTSAGVGAWGAAAVGRTAGVRTWAPLAMAAKVDLSTSTDWKEAKSFLKGLSD 107
R A S+ VG WG V++ L K + + +E + + SD
Sbjct: 751 CSALARHALESSFVG-WGLP-------VQSPQALVAMEKEEKESPFSSEEEEEDVPLDSD 802
Query: 108 KQREEHYFCKDFVRLKKIPTWKEMAKGVAVKVEEPRYKKDKQLNEKISLLRSDITKLEVD 167
++ F K + PTW+ A + E R+ K + + +++ + + + +LE +
Sbjct: 803 VEQALQTFAKTSGTMNNYPTWRRTLLRRAKEEEMKRFCKAQTIQRRLNEIEAALRELEAE 862
Query: 168 AI 169
+
Sbjct: 863 GV 864
>gi|31377579 zinc finger protein 785 [Homo sapiens]
Length = 405
Score = 30.0 bits (66), Expect = 2.9
Identities = 43/145 (29%), Positives = 54/145 (37%), Gaps = 38/145 (26%)
Query: 23 PPRPRPGHL---AGATRTRSSTCGPPAFLGVF-------------GRRA-------RTSA 59
P PRP H+ AG RTR S G +F V +RA T
Sbjct: 4 PLAPRPAHVPGEAGPRRTRESRPGAVSFADVAVYFSPEEWECLRPAQRALYRDVMRETFG 63
Query: 60 GVGAWG-----AAAVGRTAG-VRTWAPLAMAAKVDLSTSTDWKEAKSFLKGLSDKQREEH 113
+GA G A + G V W+P A D +S + + G D E+
Sbjct: 64 HLGALGFSVPKPAFISWVEGEVEAWSPEAQDP--DGESSAAFSRGQGQEAGSRDGNEEKE 121
Query: 114 YFCKDFVRLKKIPTWKEMAKGVAVK 138
RLKK P KE+A VAVK
Sbjct: 122 -------RLKKCPKQKEVAHEVAVK 139
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 30.0 bits (66), Expect = 2.9
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 91 TSTDWKEAKSFLKGLSDKQREEHYFCKDFVRLKKIPTWKEMAKGVAVKVEEPRYKKDKQL 150
+ TD E ++ L+ LS K E+ C D + + +++ ++K+ +K KQ+
Sbjct: 200 SQTDKTELQNTLRTLSSKV-EDLSTCNDLIAKHGTALQRSLSELESLKLPAESNEKIKQV 258
Query: 151 NEKISLLRSDITKLEVDAIVNAANSSLL 178
NE+ +L R + +A++NA L+
Sbjct: 259 NERATLFR-----ITSNAMINACRDFLM 281
>gi|239756740 PREDICTED: similar to CMT1A duplicated region
transcript 1 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 3.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 78 WAPLAMAAKVDLSTSTDWKEAKSFLKGLSDKQREEHYFCKDFVRLKKIPTWKEMAKGVAV 137
WA +A K+DLS + +FL+G + + +Y K IP K + G ++
Sbjct: 310 WAAMAQQVKMDLSAHGFIQNQITFLQGSYTRGIDPNYANK-----VSIPVPKMVDDGKSM 364
Query: 138 KVEEPRYK 145
+V+ P++K
Sbjct: 365 RVKHPKWK 372
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,341,239
Number of Sequences: 37866
Number of extensions: 534402
Number of successful extensions: 1874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1816
Number of HSP's gapped (non-prelim): 51
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.