Guide to the Human Genome
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Name: GNRHR Sequence: fasta or formatted (249aa) NCBI GI: 61676184
Description:

gonadotropin-releasing hormone receptor isoform 2

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [328aa] gonadotropin-releasing hormone receptor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         15           1
 C cysteine            2.8          7           1
 D aspartate           2.8          7           1
 E glutamate           2.8          7           1
 F phenylalanine       4.0         10           2
 G glycine             4.4         11           1
 H histidine           3.6          9           2
 I isoleucine          4.0         10           1
 K lysine              6.8         17           2
 L leucine            16.5         41           3
 M methionine          3.6          9           2
 N asparagine          5.2         13           2
 P proline             5.6         14           2
 Q glutamine           4.4         11           1
 R arginine            2.4          6           1
 S serine              9.6         24           2
 T threonine           6.4         16           3
 V valine              5.2         13           2
 W tryptophan          1.6          4           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gonadotropin-releasing hormone receptor isoform 2 [H... 
GNRHR                 0.662   gonadotropin-releasing hormone receptor isoform 1 [Ho...
AVPR1A                0.121   arginine vasopressin receptor 1A 
AVPR1B                0.113   arginine vasopressin receptor 1B 
OXTR                  0.104   oxytocin receptor 
HCRTR2                0.083   orexin receptor 2 
NPSR1                 0.083   G protein-coupled receptor for asthma susceptibility...
NPSR1                 0.083   G protein-coupled receptor for asthma susceptibility...
GALR3                 0.081   galanin receptor 3 
GALR2                 0.077   galanin receptor 2 
BRS3                  0.071   bombesin-like receptor 3 
PROKR2                0.071   prokineticin receptor 2 
HCRTR1                0.069   orexin receptor 1 
APLNR                 0.069   apelin receptor 
GRPR                  0.067   gastrin-releasing peptide receptor 
LOC100293905          0.067   PREDICTED: similar to gastrin-releasing peptide rec...
GPR45                 0.067   G protein-coupled receptor 45 
PROKR1                0.065   G protein-coupled receptor 73 
C3AR1                 0.062   complement component 3a receptor 1 
CHRM3                 0.062   cholinergic receptor, muscarinic 3 
HTR1B                 0.060   5-hydroxytryptamine (serotonin) receptor 1B 
AVPR2                 0.060   arginine vasopressin receptor 2 isoform 2 
AVPR2                 0.060   arginine vasopressin receptor 2 isoform 1 
PPYR1                 0.058   pancreatic polypeptide receptor 1 
NPY2R                 0.056   neuropeptide Y receptor Y2 
NPFFR2                0.056   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.056   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.056   neuropeptide FF receptor 2 isoform 3 
GPR26                 0.056   G protein-coupled receptor 26 
GALR1                 0.056   galanin receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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