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Search of human proteins with 61658632
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61658632 interleukin 32 isoform B [Homo sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61658642 interleukin 32 isoform B [Homo sapiens] 392 e-110
gi|61658632 interleukin 32 isoform B [Homo sapiens] 392 e-110
gi|61639471 interleukin 32 isoform B [Homo sapiens] 392 e-110
gi|61639466 interleukin 32 isoform B [Homo sapiens] 392 e-110
gi|61658640 interleukin 32 isoform D [Homo sapiens] 370 e-103
gi|61658638 interleukin 32 isoform C [Homo sapiens] 340 6e-94
gi|61658636 interleukin 32 isoform C [Homo sapiens] 340 6e-94
gi|61658634 interleukin 32 isoform A [Homo sapiens] 237 4e-63
gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransfera... 33 0.14
gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransfera... 33 0.14
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 32 0.25
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 30 1.2
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 29 2.1
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo... 29 2.7
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo... 29 2.7
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo... 29 2.7
gi|151101266 TERF1 (TRF1)-interacting nuclear factor 2 isoform 1... 28 3.6
gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform 2... 28 3.6
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 28 3.6
gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens] 28 4.7
gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo... 28 4.7
gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo... 28 4.7
gi|21735492 protein phosphatase 1, regulatory (inhibitor) subuni... 28 6.1
gi|31415880 protein phosphatase 1, regulatory (inhibitor) subuni... 28 6.1
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 28 6.1
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 28 6.1
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 28 6.1
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 28 6.1
gi|57863310 stromal antigen 3 [Homo sapiens] 28 6.1
gi|89941470 ankyrin repeat domain 34 [Homo sapiens] 28 6.1
>gi|61658642 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 392 bits (1008), Expect = e-110
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658632 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 392 bits (1008), Expect = e-110
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639471 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 392 bits (1008), Expect = e-110
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639466 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 392 bits (1008), Expect = e-110
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658640 interleukin 32 isoform D [Homo sapiens]
Length = 179
Score = 370 bits (949), Expect = e-103
Identities = 179/188 (95%), Positives = 179/188 (95%), Gaps = 9/188 (4%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 172 CSEPQSSK 179
>gi|61658638 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 340 bits (871), Expect = 6e-94
Identities = 168/188 (89%), Positives = 168/188 (89%), Gaps = 20/188 (10%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 161 CSEPQSSK 168
>gi|61658636 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 340 bits (871), Expect = 6e-94
Identities = 168/188 (89%), Positives = 168/188 (89%), Gaps = 20/188 (10%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 161 CSEPQSSK 168
>gi|61658634 interleukin 32 isoform A [Homo sapiens]
Length = 131
Score = 237 bits (605), Expect = 4e-63
Identities = 129/188 (68%), Positives = 130/188 (69%), Gaps = 57/188 (30%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
Query: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
SFC +SYGAPRGDKEELTPQK
Sbjct: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
Query: 181 CSEPQSSK 188
CSEPQSSK
Sbjct: 124 CSEPQSSK 131
>gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.14
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 125 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 184
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
>gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.14
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 125 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 184
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 32.3 bits (72), Expect = 0.25
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 54 YLETVAAYYEEQHPELTPLLEKERDGLRCR------GNRSPVPDVEDPATEEPGESFCDK 107
+ + A EE+ L L+++R +RCR + P+ PA G+S C +
Sbjct: 739 FFNSAVASAEEEQARLRGQLKEQR--VRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGE 796
Query: 108 VMRWFQAMLQRLQTWWHGVL---AWVKEKVVALVH 139
R Q +++LQ+ + ++ A +KE+V L H
Sbjct: 797 THRALQGAMEKLQSRFMELMQEKADLKERVEELEH 831
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 30.0 bits (66), Expect = 1.2
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 59 AAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFC 105
+AY+ + E E+ +C G+R+P P++ P+T +P E C
Sbjct: 995 SAYFSDLEAEAEATSGPEK---KCGGDRAPGPELGLPSTGQPSEQVC 1038
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 29.3 bits (64), Expect = 2.1
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 74 EKERDGLRCRGNRSPVPDVE-DPATEEP 100
++E+D R RG+ SP DVE + TEEP
Sbjct: 349 DREKDSTRSRGSDSPAADVEIEYVTEEP 376
>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 334 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 364
>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 334 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 364
>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
a [Homo sapiens]
Length = 739
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 390 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 420
>gi|151101266 TERF1 (TRF1)-interacting nuclear factor 2 isoform 1
[Homo sapiens]
Length = 451
Score = 28.5 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 PKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYL 55
PK D++K+ +A E FY +++ + S L ELE ++ E +L
Sbjct: 97 PKATKQDLRKIL----EAQETFYQQVKQLSEAPVDLASKLQELEQEYGEPFL 144
>gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform 2
[Homo sapiens]
Length = 354
Score = 28.5 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 PKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYL 55
PK D++K+ +A E FY +++ + S L ELE ++ E +L
Sbjct: 97 PKATKQDLRKIL----EAQETFYQQVKQLSEAPVDLASKLQELEQEYGEPFL 144
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 28.5 bits (62), Expect = 3.6
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 7 LSDDMKKLKA---RMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKE-----GYLETV 58
L KKL+A RM + E + QNAE + A L ++ K+ +LE
Sbjct: 1735 LLSQKKKLEADVARMQKEAEEVVQECQNAEEKAKKAAIEAANLSEELKKKQDTIAHLERT 1794
Query: 59 AAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 102
E+ +L L E + + G+R + +E E GE
Sbjct: 1795 RENMEQTITDLQKRL-AEAEQMALMGSRKQIQKLESRVRELEGE 1837
>gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens]
Length = 267
Score = 28.1 bits (61), Expect = 4.7
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 7 LSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMS-SLAELE-------DDFKEGYLETV 58
++ KL+ ++ + F+D ++ G Q MS L E++ DDF++ + E +
Sbjct: 77 VTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEM 136
Query: 59 AAYYEEQHPELTPLLEKERDGL 80
Y ++ P L E R L
Sbjct: 137 ELYRQKVEPLRAELQEGARQKL 158
>gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo
sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 4.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 69 LTPLLEKERDGLRCRGNRSPVPDVED 94
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo
sapiens]
Length = 666
Score = 28.1 bits (61), Expect = 4.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 69 LTPLLEKERDGLRCRGNRSPVPDVED 94
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|21735492 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 1 [Homo sapiens]
Length = 204
Score = 27.7 bits (60), Expect = 6.1
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 71 PLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 102
PL E ERDG VEDPA EPGE
Sbjct: 168 PLDESERDG-------GSEDQVEDPALSEPGE 192
>gi|31415880 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 2 [Homo sapiens]
Length = 168
Score = 27.7 bits (60), Expect = 6.1
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 71 PLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 102
PL E ERDG VEDPA EPGE
Sbjct: 132 PLDESERDG-------GSEDQVEDPALSEPGE 156
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 27.7 bits (60), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 90 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 27.7 bits (60), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 90 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 27.7 bits (60), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 90 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 27.7 bits (60), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 90 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|57863310 stromal antigen 3 [Homo sapiens]
Length = 1225
Score = 27.7 bits (60), Expect = 6.1
Identities = 16/77 (20%), Positives = 33/77 (42%)
Query: 5 KVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAAYYEE 64
+ + D + L A + +D + + G S LA+ + DF++ V +
Sbjct: 7 RAVGDTKRALSASSSSSASLPFDDRDSNHTSEGNGDSLLADEDTDFEDSLNRNVKKRAAK 66
Query: 65 QHPELTPLLEKERDGLR 81
+ P+ TP+ + + G R
Sbjct: 67 RPPKTTPVAKHPKKGSR 83
>gi|89941470 ankyrin repeat domain 34 [Homo sapiens]
Length = 496
Score = 27.7 bits (60), Expect = 6.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 85 NRSPVPDVEDPATEEPGESFC 105
N P P VEDPA P FC
Sbjct: 161 NSPPSPGVEDPAPASPSPGFC 181
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,906,375
Number of Sequences: 37866
Number of extensions: 355794
Number of successful extensions: 1208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1183
Number of HSP's gapped (non-prelim): 36
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.