Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL32 Sequence: fasta or formatted (168aa) NCBI GI: 61658636
Description:

interleukin 32 isoform C

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [188aa] interleukin 32 isoform B
alt prot [188aa] interleukin 32 isoform B
alt prot [188aa] interleukin 32 isoform B
alt prot [131aa] interleukin 32 isoform A
alt mRNA [168aa] interleukin 32 isoform C
alt prot [179aa] interleukin 32 isoform D
alt prot [188aa] interleukin 32 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         11           2
 C cysteine            3.6          6           2
 D aspartate           5.4          9           2
 E glutamate          10.7         18           2
 F phenylalanine       4.8          8           1
 G glycine             4.2          7           1
 H histidine           1.8          3           1
 I isoleucine          0.0          0           0
 K lysine              7.7         13           2
 L leucine            10.1         17           2
 M methionine          4.2          7           1
 N asparagine          0.6          1           1
 P proline             6.0         10           1
 Q glutamine           6.0         10           1
 R arginine            4.8          8           1
 S serine              8.3         14           2
 T threonine           3.0          5           1
 V valine              7.1         12           2
 W tryptophan          3.0          5           2
 Y tyrosine            2.4          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 32 isoform C 
IL32                  1.000   interleukin 32 isoform C 
IL32                  0.963   interleukin 32 isoform B 
IL32                  0.963   interleukin 32 isoform B 
IL32                  0.963   interleukin 32 isoform B 
IL32                  0.963   interleukin 32 isoform B 
IL32                  0.920   interleukin 32 isoform D 
IL32                  0.486   interleukin 32 isoform A 
CSGALNACT1            0.024   chondroitin sulfate N-acetylgalactosaminyltransfera...
CSGALNACT1            0.024   chondroitin sulfate N-acetylgalactosaminyltransfera...
GOLGA2                0.021   Golgi autoantigen, golgin subfamily a, 2 
SEPT4                 0.021   septin 4 isoform 1 
SEPT4                 0.021   septin 4 isoform 3 
AATK                  0.015   apoptosis-associated tyrosine kinase 
SF3B2                 0.012   splicing factor 3B subunit 2 
ACCN4                 0.009   amiloride-sensitive cation channel 4 isoform 2 [Homo...
ACCN4                 0.009   amiloride-sensitive cation channel 4 isoform 1 [Homo...
PPP1R1B               0.009   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R1B               0.009   protein phosphatase 1, regulatory (inhibitor) subuni...
LOC100131930          0.009   PREDICTED: similar to hCG2004312 isoform 2 
LOC100131930          0.009   PREDICTED: similar to hCG2004312 isoform 1 
LOC100288367          0.009   PREDICTED: hypothetical protein XP_002343418 isofor...
LOC100288367          0.009   PREDICTED: hypothetical protein XP_002343419 isofor...
DNAH5                 0.009   dynein, axonemal, heavy chain 5 
ANKRD34A              0.009   ankyrin repeat domain 34 
CASP4                 0.006   caspase 4 isoform gamma precursor 
CASP4                 0.006   caspase 4 isoform alpha precursor 
PLCH2                 0.006   phospholipase C, eta 2 
RNMT                  0.006   RNA (guanine-7-) methyltransferase 
CTAGE5                0.006   CTAGE family, member 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press